Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02444

Experiment: D-Galactose 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02443 and BACOVA_02444 are separated by 159 nucleotidesBACOVA_02444 and BACOVA_02446 are separated by 68 nucleotides BACOVA_02443: BACOVA_02443 - formate--tetrahydrofolate ligase, at 209,675 to 211,342 _02443 BACOVA_02444: BACOVA_02444 - hypothetical protein, at 211,502 to 211,612 _02444 BACOVA_02446: BACOVA_02446 - glycine hydroxymethyltransferase, at 211,681 to 212,961 _02446 Position (kb) 211 212Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1 2at 210.508 kb on + strand, within BACOVA_02443at 210.508 kb on + strand, within BACOVA_02443at 210.509 kb on - strand, within BACOVA_02443at 210.509 kb on - strand, within BACOVA_02443at 210.551 kb on + strand, within BACOVA_02443at 210.551 kb on + strand, within BACOVA_02443at 210.551 kb on + strand, within BACOVA_02443at 210.552 kb on - strand, within BACOVA_02443at 210.602 kb on + strand, within BACOVA_02443at 210.672 kb on + strand, within BACOVA_02443at 210.799 kb on - strand, within BACOVA_02443at 210.808 kb on + strand, within BACOVA_02443at 210.887 kb on - strand, within BACOVA_02443at 210.887 kb on - strand, within BACOVA_02443at 210.921 kb on + strand, within BACOVA_02443at 210.921 kb on + strand, within BACOVA_02443at 210.921 kb on + strand, within BACOVA_02443at 210.921 kb on + strand, within BACOVA_02443at 210.922 kb on - strand, within BACOVA_02443at 210.942 kb on + strand, within BACOVA_02443at 210.942 kb on + strand, within BACOVA_02443at 210.942 kb on + strand, within BACOVA_02443at 210.943 kb on - strand, within BACOVA_02443at 210.946 kb on + strand, within BACOVA_02443at 210.947 kb on - strand, within BACOVA_02443at 210.951 kb on + strand, within BACOVA_02443at 210.951 kb on + strand, within BACOVA_02443at 210.952 kb on - strand, within BACOVA_02443at 210.975 kb on + strand, within BACOVA_02443at 210.986 kb on + strand, within BACOVA_02443at 210.989 kb on - strand, within BACOVA_02443at 211.000 kb on + strand, within BACOVA_02443at 211.026 kb on + strand, within BACOVA_02443at 211.036 kb on + strand, within BACOVA_02443at 211.037 kb on - strand, within BACOVA_02443at 211.037 kb on - strand, within BACOVA_02443at 211.040 kb on + strand, within BACOVA_02443at 211.040 kb on + strand, within BACOVA_02443at 211.057 kb on + strand, within BACOVA_02443at 211.061 kb on + strand, within BACOVA_02443at 211.063 kb on + strand, within BACOVA_02443at 211.064 kb on - strand, within BACOVA_02443at 211.085 kb on - strand, within BACOVA_02443at 211.111 kb on + strand, within BACOVA_02443at 211.119 kb on - strand, within BACOVA_02443at 211.210 kb on + strandat 211.210 kb on + strandat 211.210 kb on + strandat 211.211 kb on - strandat 211.243 kb on - strandat 211.267 kb on + strandat 211.279 kb on - strandat 211.340 kb on + strandat 211.345 kb on + strandat 211.346 kb on - strandat 211.348 kb on - strandat 211.387 kb on - strandat 211.404 kb on + strandat 211.441 kb on - strandat 211.442 kb on + strandat 211.442 kb on + strandat 211.442 kb on + strandat 211.442 kb on + strandat 211.512 kb on + strandat 211.513 kb on - strand, within BACOVA_02444at 211.513 kb on - strand, within BACOVA_02444at 211.514 kb on + strand, within BACOVA_02444at 211.525 kb on - strand, within BACOVA_02444at 211.525 kb on - strand, within BACOVA_02444at 211.538 kb on - strand, within BACOVA_02444at 211.626 kb on + strandat 211.660 kb on + strandat 211.660 kb on + strandat 211.660 kb on + strandat 211.661 kb on - strandat 211.661 kb on - strandat 211.764 kb on + strandat 211.764 kb on + strandat 211.765 kb on - strandat 211.772 kb on - strandat 211.772 kb on - strandat 211.911 kb on + strand, within BACOVA_02446at 211.989 kb on + strand, within BACOVA_02446at 211.989 kb on + strand, within BACOVA_02446at 212.053 kb on + strand, within BACOVA_02446at 212.054 kb on - strand, within BACOVA_02446at 212.054 kb on - strand, within BACOVA_02446at 212.072 kb on - strand, within BACOVA_02446at 212.084 kb on + strand, within BACOVA_02446at 212.085 kb on - strand, within BACOVA_02446at 212.085 kb on - strand, within BACOVA_02446at 212.140 kb on + strand, within BACOVA_02446at 212.140 kb on + strand, within BACOVA_02446at 212.141 kb on - strand, within BACOVA_02446at 212.141 kb on - strand, within BACOVA_02446at 212.299 kb on - strand, within BACOVA_02446at 212.299 kb on - strand, within BACOVA_02446at 212.307 kb on + strand, within BACOVA_02446at 212.308 kb on - strand, within BACOVA_02446at 212.319 kb on + strand, within BACOVA_02446at 212.320 kb on - strand, within BACOVA_02446at 212.327 kb on + strand, within BACOVA_02446at 212.328 kb on - strand, within BACOVA_02446at 212.404 kb on + strand, within BACOVA_02446at 212.427 kb on + strand, within BACOVA_02446at 212.428 kb on - strand, within BACOVA_02446at 212.453 kb on + strand, within BACOVA_02446at 212.454 kb on - strand, within BACOVA_02446at 212.567 kb on + strand, within BACOVA_02446at 212.567 kb on + strand, within BACOVA_02446

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C)
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210,508 + BACOVA_02443 0.50 +0.3
210,508 + BACOVA_02443 0.50 +0.6
210,509 - BACOVA_02443 0.50 -0.3
210,509 - BACOVA_02443 0.50 -1.6
210,551 + BACOVA_02443 0.53 +1.2
210,551 + BACOVA_02443 0.53 +1.1
210,551 + BACOVA_02443 0.53 -0.6
210,552 - BACOVA_02443 0.53 -1.0
210,602 + BACOVA_02443 0.56 -1.6
210,672 + BACOVA_02443 0.60 -1.8
210,799 - BACOVA_02443 0.67 +0.5
210,808 + BACOVA_02443 0.68 -1.2
210,887 - BACOVA_02443 0.73 +2.2
210,887 - BACOVA_02443 0.73 +0.7
210,921 + BACOVA_02443 0.75 +1.1
210,921 + BACOVA_02443 0.75 +1.7
210,921 + BACOVA_02443 0.75 -0.5
210,921 + BACOVA_02443 0.75 +1.8
210,922 - BACOVA_02443 0.75 -0.2
210,942 + BACOVA_02443 0.76 +0.5
210,942 + BACOVA_02443 0.76 +0.0
210,942 + BACOVA_02443 0.76 +0.8
210,943 - BACOVA_02443 0.76 +2.0
210,946 + BACOVA_02443 0.76 -1.2
210,947 - BACOVA_02443 0.76 +0.6
210,951 + BACOVA_02443 0.76 +1.2
210,951 + BACOVA_02443 0.76 +1.0
210,952 - BACOVA_02443 0.77 +0.1
210,975 + BACOVA_02443 0.78 -1.5
210,986 + BACOVA_02443 0.79 +0.0
210,989 - BACOVA_02443 0.79 -1.8
211,000 + BACOVA_02443 0.79 +0.2
211,026 + BACOVA_02443 0.81 -1.3
211,036 + BACOVA_02443 0.82 -0.6
211,037 - BACOVA_02443 0.82 +0.3
211,037 - BACOVA_02443 0.82 +0.4
211,040 + BACOVA_02443 0.82 +0.8
211,040 + BACOVA_02443 0.82 -2.8
211,057 + BACOVA_02443 0.83 +0.0
211,061 + BACOVA_02443 0.83 -2.5
211,063 + BACOVA_02443 0.83 -0.2
211,064 - BACOVA_02443 0.83 -0.2
211,085 - BACOVA_02443 0.85 -0.9
211,111 + BACOVA_02443 0.86 +1.4
211,119 - BACOVA_02443 0.87 +0.7
211,210 + +2.1
211,210 + +0.2
211,210 + +1.6
211,211 - +1.6
211,243 - +0.6
211,267 + -2.0
211,279 - -1.2
211,340 + +0.4
211,345 + +0.0
211,346 - -0.2
211,348 - +0.8
211,387 - +0.9
211,404 + -1.0
211,441 - -0.2
211,442 + -0.3
211,442 + -0.8
211,442 + +1.3
211,442 + +1.8
211,512 + -2.0
211,513 - BACOVA_02444 0.10 +0.2
211,513 - BACOVA_02444 0.10 +0.8
211,514 + BACOVA_02444 0.11 -0.2
211,525 - BACOVA_02444 0.21 +1.8
211,525 - BACOVA_02444 0.21 -2.3
211,538 - BACOVA_02444 0.32 -0.2
211,626 + -0.2
211,660 + -1.8
211,660 + +0.4
211,660 + -3.1
211,661 - -0.7
211,661 - -0.1
211,764 + -4.2
211,764 + -3.6
211,765 - -2.2
211,772 - -3.9
211,772 - -3.8
211,911 + BACOVA_02446 0.18 -1.8
211,989 + BACOVA_02446 0.24 -0.8
211,989 + BACOVA_02446 0.24 -2.5
212,053 + BACOVA_02446 0.29 -3.6
212,054 - BACOVA_02446 0.29 -5.2
212,054 - BACOVA_02446 0.29 -3.2
212,072 - BACOVA_02446 0.31 -4.4
212,084 + BACOVA_02446 0.31 -3.2
212,085 - BACOVA_02446 0.32 -3.9
212,085 - BACOVA_02446 0.32 -2.4
212,140 + BACOVA_02446 0.36 -3.8
212,140 + BACOVA_02446 0.36 -2.6
212,141 - BACOVA_02446 0.36 -2.2
212,141 - BACOVA_02446 0.36 -2.4
212,299 - BACOVA_02446 0.48 -2.2
212,299 - BACOVA_02446 0.48 -1.2
212,307 + BACOVA_02446 0.49 -2.0
212,308 - BACOVA_02446 0.49 -1.5
212,319 + BACOVA_02446 0.50 -3.2
212,320 - BACOVA_02446 0.50 -2.0
212,327 + BACOVA_02446 0.50 -5.8
212,328 - BACOVA_02446 0.51 -3.0
212,404 + BACOVA_02446 0.56 -1.2
212,427 + BACOVA_02446 0.58 -2.5
212,428 - BACOVA_02446 0.58 -4.2
212,453 + BACOVA_02446 0.60 -3.6
212,454 - BACOVA_02446 0.60 -2.6
212,567 + BACOVA_02446 0.69 -3.8
212,567 + BACOVA_02446 0.69 -1.5

Or see this region's nucleotide sequence