Experiment: D-Galactose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_01714 and BACOVA_01715 are separated by 25 nucleotides BACOVA_01715 and BACOVA_01716 are separated by 87 nucleotides BACOVA_01716 and BACOVA_01717 are separated by 180 nucleotides
BACOVA_01714: BACOVA_01714 - transporter, SSS family, at 138,870 to 140,564
_01714
BACOVA_01715: BACOVA_01715 - aldose 1-epimerase, at 140,590 to 141,729
_01715
BACOVA_01716: BACOVA_01716 - hypothetical protein, at 141,817 to 141,924
_01716
BACOVA_01717: BACOVA_01717 - carbohydrate binding domain protein, at 142,105 to 144,087
_01717
Position (kb) 140
141
142 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 139.650 kb on + strand, within BACOVA_01714 at 139.650 kb on + strand, within BACOVA_01714 at 139.721 kb on + strand, within BACOVA_01714 at 139.725 kb on - strand, within BACOVA_01714 at 139.770 kb on + strand, within BACOVA_01714 at 139.884 kb on - strand, within BACOVA_01714 at 139.891 kb on + strand, within BACOVA_01714 at 139.900 kb on - strand, within BACOVA_01714 at 140.017 kb on + strand, within BACOVA_01714 at 140.018 kb on - strand, within BACOVA_01714 at 140.045 kb on + strand, within BACOVA_01714 at 140.049 kb on - strand, within BACOVA_01714 at 140.049 kb on - strand, within BACOVA_01714 at 140.051 kb on - strand, within BACOVA_01714 at 140.119 kb on - strand, within BACOVA_01714 at 140.139 kb on + strand, within BACOVA_01714 at 140.164 kb on - strand, within BACOVA_01714 at 140.182 kb on - strand, within BACOVA_01714 at 140.185 kb on + strand, within BACOVA_01714 at 140.185 kb on + strand, within BACOVA_01714 at 140.186 kb on - strand, within BACOVA_01714 at 140.190 kb on + strand, within BACOVA_01714 at 140.217 kb on - strand, within BACOVA_01714 at 140.234 kb on - strand, within BACOVA_01714 at 140.261 kb on + strand, within BACOVA_01714 at 140.262 kb on - strand, within BACOVA_01714 at 140.262 kb on - strand, within BACOVA_01714 at 140.262 kb on - strand, within BACOVA_01714 at 140.262 kb on - strand, within BACOVA_01714 at 140.262 kb on - strand, within BACOVA_01714 at 140.264 kb on - strand, within BACOVA_01714 at 140.264 kb on - strand, within BACOVA_01714 at 140.266 kb on - strand, within BACOVA_01714 at 140.281 kb on + strand, within BACOVA_01714 at 140.281 kb on + strand, within BACOVA_01714 at 140.282 kb on - strand, within BACOVA_01714 at 140.282 kb on - strand, within BACOVA_01714 at 140.295 kb on + strand, within BACOVA_01714 at 140.417 kb on + strand at 140.418 kb on - strand at 140.464 kb on + strand at 140.508 kb on - strand at 140.510 kb on + strand at 140.552 kb on - strand at 140.554 kb on - strand at 140.572 kb on - strand at 140.580 kb on + strand at 140.589 kb on - strand at 140.625 kb on + strand at 140.625 kb on + strand at 140.628 kb on + strand at 140.628 kb on + strand at 140.651 kb on - strand at 140.730 kb on - strand, within BACOVA_01715 at 140.736 kb on + strand, within BACOVA_01715 at 140.805 kb on + strand, within BACOVA_01715 at 140.809 kb on + strand, within BACOVA_01715 at 140.809 kb on + strand, within BACOVA_01715 at 140.809 kb on + strand, within BACOVA_01715 at 140.855 kb on - strand, within BACOVA_01715 at 140.901 kb on - strand, within BACOVA_01715 at 140.901 kb on - strand, within BACOVA_01715 at 140.949 kb on + strand, within BACOVA_01715 at 141.018 kb on + strand, within BACOVA_01715 at 141.024 kb on + strand, within BACOVA_01715 at 141.039 kb on + strand, within BACOVA_01715 at 141.039 kb on + strand, within BACOVA_01715 at 141.044 kb on + strand, within BACOVA_01715 at 141.059 kb on + strand, within BACOVA_01715 at 141.059 kb on + strand, within BACOVA_01715 at 141.059 kb on + strand, within BACOVA_01715 at 141.060 kb on - strand, within BACOVA_01715 at 141.064 kb on + strand, within BACOVA_01715 at 141.064 kb on + strand, within BACOVA_01715 at 141.065 kb on - strand, within BACOVA_01715 at 141.065 kb on - strand, within BACOVA_01715 at 141.065 kb on - strand, within BACOVA_01715 at 141.126 kb on + strand, within BACOVA_01715 at 141.127 kb on - strand, within BACOVA_01715 at 141.151 kb on - strand, within BACOVA_01715 at 141.161 kb on + strand, within BACOVA_01715 at 141.165 kb on + strand, within BACOVA_01715 at 141.305 kb on + strand, within BACOVA_01715 at 141.305 kb on + strand, within BACOVA_01715 at 141.305 kb on + strand, within BACOVA_01715 at 141.306 kb on - strand, within BACOVA_01715 at 141.423 kb on + strand, within BACOVA_01715 at 141.445 kb on + strand, within BACOVA_01715 at 141.453 kb on + strand, within BACOVA_01715 at 141.454 kb on - strand, within BACOVA_01715 at 141.454 kb on - strand, within BACOVA_01715 at 141.455 kb on + strand, within BACOVA_01715 at 141.455 kb on + strand, within BACOVA_01715 at 141.456 kb on - strand, within BACOVA_01715 at 141.456 kb on - strand, within BACOVA_01715 at 141.484 kb on + strand, within BACOVA_01715 at 141.498 kb on + strand, within BACOVA_01715 at 141.499 kb on - strand, within BACOVA_01715 at 141.532 kb on - strand, within BACOVA_01715 at 141.556 kb on + strand, within BACOVA_01715 at 141.557 kb on - strand, within BACOVA_01715 at 141.557 kb on - strand, within BACOVA_01715 at 141.557 kb on - strand, within BACOVA_01715 at 141.565 kb on - strand, within BACOVA_01715 at 141.580 kb on + strand, within BACOVA_01715 at 141.586 kb on - strand, within BACOVA_01715 at 141.586 kb on - strand, within BACOVA_01715 at 141.588 kb on - strand, within BACOVA_01715 at 141.830 kb on + strand, within BACOVA_01716 at 141.830 kb on + strand, within BACOVA_01716 at 141.839 kb on + strand, within BACOVA_01716 at 141.840 kb on - strand, within BACOVA_01716 at 141.864 kb on - strand, within BACOVA_01716 at 141.864 kb on - strand, within BACOVA_01716 at 141.871 kb on - strand, within BACOVA_01716 at 141.872 kb on + strand, within BACOVA_01716 at 141.906 kb on + strand, within BACOVA_01716 at 141.907 kb on - strand, within BACOVA_01716 at 142.020 kb on + strand at 142.020 kb on + strand at 142.021 kb on - strand at 142.076 kb on + strand at 142.081 kb on - strand at 142.082 kb on + strand at 142.085 kb on - strand at 142.115 kb on - strand at 142.136 kb on + strand at 142.146 kb on + strand at 142.147 kb on - strand at 142.147 kb on - strand at 142.221 kb on + strand at 142.221 kb on + strand at 142.221 kb on + strand at 142.222 kb on - strand at 142.222 kb on - strand at 142.224 kb on + strand at 142.224 kb on + strand at 142.224 kb on + strand at 142.225 kb on - strand at 142.225 kb on - strand at 142.225 kb on - strand at 142.225 kb on - strand at 142.228 kb on + strand at 142.229 kb on - strand at 142.229 kb on - strand at 142.355 kb on + strand, within BACOVA_01717 at 142.356 kb on - strand, within BACOVA_01717 at 142.422 kb on + strand, within BACOVA_01717 at 142.422 kb on + strand, within BACOVA_01717 at 142.423 kb on - strand, within BACOVA_01717 at 142.423 kb on - strand, within BACOVA_01717 at 142.522 kb on - strand, within BACOVA_01717 at 142.551 kb on - strand, within BACOVA_01717 at 142.599 kb on + strand, within BACOVA_01717 at 142.611 kb on + strand, within BACOVA_01717 at 142.653 kb on + strand, within BACOVA_01717 at 142.653 kb on + strand, within BACOVA_01717 at 142.671 kb on - strand, within BACOVA_01717
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose 10 mM (C) remove 139,650 + BACOVA_01714 0.46 -2.7 139,650 + BACOVA_01714 0.46 -2.0 139,721 + BACOVA_01714 0.50 +0.4 139,725 - BACOVA_01714 0.50 -1.0 139,770 + BACOVA_01714 0.53 -1.9 139,884 - BACOVA_01714 0.60 -2.0 139,891 + BACOVA_01714 0.60 -1.7 139,900 - BACOVA_01714 0.61 +1.3 140,017 + BACOVA_01714 0.68 -0.4 140,018 - BACOVA_01714 0.68 +0.3 140,045 + BACOVA_01714 0.69 +0.4 140,049 - BACOVA_01714 0.70 +0.1 140,049 - BACOVA_01714 0.70 +0.1 140,051 - BACOVA_01714 0.70 -0.0 140,119 - BACOVA_01714 0.74 +0.1 140,139 + BACOVA_01714 0.75 +0.3 140,164 - BACOVA_01714 0.76 +0.8 140,182 - BACOVA_01714 0.77 +1.2 140,185 + BACOVA_01714 0.78 -0.0 140,185 + BACOVA_01714 0.78 -0.9 140,186 - BACOVA_01714 0.78 +0.4 140,190 + BACOVA_01714 0.78 +2.1 140,217 - BACOVA_01714 0.79 +0.8 140,234 - BACOVA_01714 0.80 +0.5 140,261 + BACOVA_01714 0.82 -0.7 140,262 - BACOVA_01714 0.82 -1.4 140,262 - BACOVA_01714 0.82 +2.5 140,262 - BACOVA_01714 0.82 -0.9 140,262 - BACOVA_01714 0.82 +1.5 140,262 - BACOVA_01714 0.82 +0.8 140,264 - BACOVA_01714 0.82 -1.3 140,264 - BACOVA_01714 0.82 +0.8 140,266 - BACOVA_01714 0.82 +1.2 140,281 + BACOVA_01714 0.83 +0.7 140,281 + BACOVA_01714 0.83 +0.4 140,282 - BACOVA_01714 0.83 -0.2 140,282 - BACOVA_01714 0.83 +0.0 140,295 + BACOVA_01714 0.84 +2.0 140,417 + -1.2 140,418 - +1.1 140,464 + +0.6 140,508 - -0.6 140,510 + -1.9 140,552 - +0.8 140,554 - -1.4 140,572 - -1.4 140,580 + +0.4 140,589 - -1.0 140,625 + -0.5 140,625 + +0.5 140,628 + -1.3 140,628 + +1.1 140,651 - +1.4 140,730 - BACOVA_01715 0.12 +2.8 140,736 + BACOVA_01715 0.13 -1.4 140,805 + BACOVA_01715 0.19 -2.2 140,809 + BACOVA_01715 0.19 -1.4 140,809 + BACOVA_01715 0.19 -0.6 140,809 + BACOVA_01715 0.19 -0.8 140,855 - BACOVA_01715 0.23 +0.1 140,901 - BACOVA_01715 0.27 +3.3 140,901 - BACOVA_01715 0.27 -2.4 140,949 + BACOVA_01715 0.31 +0.5 141,018 + BACOVA_01715 0.38 -0.6 141,024 + BACOVA_01715 0.38 -1.2 141,039 + BACOVA_01715 0.39 -2.2 141,039 + BACOVA_01715 0.39 -1.0 141,044 + BACOVA_01715 0.40 +1.5 141,059 + BACOVA_01715 0.41 -2.4 141,059 + BACOVA_01715 0.41 -0.3 141,059 + BACOVA_01715 0.41 -0.6 141,060 - BACOVA_01715 0.41 +1.0 141,064 + BACOVA_01715 0.42 -0.4 141,064 + BACOVA_01715 0.42 -1.1 141,065 - BACOVA_01715 0.42 +2.0 141,065 - BACOVA_01715 0.42 -0.0 141,065 - BACOVA_01715 0.42 -0.4 141,126 + BACOVA_01715 0.47 -0.5 141,127 - BACOVA_01715 0.47 -0.9 141,151 - BACOVA_01715 0.49 +1.2 141,161 + BACOVA_01715 0.50 +0.6 141,165 + BACOVA_01715 0.50 +0.2 141,305 + BACOVA_01715 0.63 -0.6 141,305 + BACOVA_01715 0.63 -1.5 141,305 + BACOVA_01715 0.63 -0.6 141,306 - BACOVA_01715 0.63 +1.4 141,423 + BACOVA_01715 0.73 -0.8 141,445 + BACOVA_01715 0.75 -0.1 141,453 + BACOVA_01715 0.76 -2.2 141,454 - BACOVA_01715 0.76 -0.6 141,454 - BACOVA_01715 0.76 +1.5 141,455 + BACOVA_01715 0.76 -0.6 141,455 + BACOVA_01715 0.76 -1.3 141,456 - BACOVA_01715 0.76 +0.5 141,456 - BACOVA_01715 0.76 -1.3 141,484 + BACOVA_01715 0.78 +1.0 141,498 + BACOVA_01715 0.80 +0.3 141,499 - BACOVA_01715 0.80 +0.4 141,532 - BACOVA_01715 0.83 -0.6 141,556 + BACOVA_01715 0.85 -0.7 141,557 - BACOVA_01715 0.85 -0.6 141,557 - BACOVA_01715 0.85 -0.2 141,557 - BACOVA_01715 0.85 +0.6 141,565 - BACOVA_01715 0.86 -0.1 141,580 + BACOVA_01715 0.87 -0.0 141,586 - BACOVA_01715 0.87 +0.6 141,586 - BACOVA_01715 0.87 +0.5 141,588 - BACOVA_01715 0.88 +0.4 141,830 + BACOVA_01716 0.12 +1.0 141,830 + BACOVA_01716 0.12 +1.3 141,839 + BACOVA_01716 0.20 +1.1 141,840 - BACOVA_01716 0.21 -0.0 141,864 - BACOVA_01716 0.44 +1.0 141,864 - BACOVA_01716 0.44 +1.0 141,871 - BACOVA_01716 0.50 -0.6 141,872 + BACOVA_01716 0.51 +1.7 141,906 + BACOVA_01716 0.82 +1.3 141,907 - BACOVA_01716 0.83 +2.0 142,020 + +1.2 142,020 + +2.2 142,021 - +0.8 142,076 + +1.7 142,081 - +0.5 142,082 + +1.0 142,085 - -1.0 142,115 - -0.7 142,136 + +0.6 142,146 + -1.0 142,147 - -0.7 142,147 - +0.3 142,221 + +0.3 142,221 + +2.2 142,221 + -2.0 142,222 - -0.5 142,222 - -0.6 142,224 + +0.2 142,224 + -2.0 142,224 + +0.6 142,225 - +1.7 142,225 - -0.0 142,225 - -0.0 142,225 - +0.5 142,228 + -1.0 142,229 - -0.2 142,229 - +0.3 142,355 + BACOVA_01717 0.13 +1.1 142,356 - BACOVA_01717 0.13 +1.0 142,422 + BACOVA_01717 0.16 -2.0 142,422 + BACOVA_01717 0.16 +1.0 142,423 - BACOVA_01717 0.16 +1.1 142,423 - BACOVA_01717 0.16 +0.1 142,522 - BACOVA_01717 0.21 -0.1 142,551 - BACOVA_01717 0.22 -0.6 142,599 + BACOVA_01717 0.25 -0.9 142,611 + BACOVA_01717 0.26 -1.0 142,653 + BACOVA_01717 0.28 -0.8 142,653 + BACOVA_01717 0.28 -0.4 142,671 - BACOVA_01717 0.29 -0.0
Or see this region's nucleotide sequence