Experiment: D-Glucose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_05397 and BACOVA_05398 are separated by 349 nucleotides BACOVA_05398 and BACOVA_05399 are separated by 59 nucleotides BACOVA_05399 and BACOVA_05400 are separated by 30 nucleotides
BACOVA_05397: BACOVA_05397 - putative DNA-binding protein, at 878,134 to 878,760
_05397
BACOVA_05398: BACOVA_05398 - acetyltransferase, GNAT family, at 879,110 to 880,084
_05398
BACOVA_05399: BACOVA_05399 - hypothetical protein, at 880,144 to 880,575
_05399
BACOVA_05400: BACOVA_05400 - hypothetical protein, at 880,606 to 880,968
_05400
Position (kb) 879
880
881 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 878.148 kb on + strand at 878.148 kb on + strand at 878.148 kb on + strand at 878.149 kb on - strand at 878.150 kb on + strand at 878.151 kb on - strand at 878.252 kb on - strand, within BACOVA_05397 at 878.297 kb on + strand, within BACOVA_05397 at 878.298 kb on - strand, within BACOVA_05397 at 878.302 kb on + strand, within BACOVA_05397 at 878.303 kb on - strand, within BACOVA_05397 at 878.437 kb on + strand, within BACOVA_05397 at 878.438 kb on - strand, within BACOVA_05397 at 878.438 kb on - strand, within BACOVA_05397 at 878.511 kb on + strand, within BACOVA_05397 at 878.599 kb on + strand, within BACOVA_05397 at 878.600 kb on - strand, within BACOVA_05397 at 878.611 kb on + strand, within BACOVA_05397 at 878.611 kb on + strand, within BACOVA_05397 at 878.611 kb on + strand, within BACOVA_05397 at 878.666 kb on - strand, within BACOVA_05397 at 878.666 kb on - strand, within BACOVA_05397 at 878.673 kb on + strand, within BACOVA_05397 at 878.674 kb on - strand, within BACOVA_05397 at 878.674 kb on - strand, within BACOVA_05397 at 878.676 kb on + strand, within BACOVA_05397 at 878.695 kb on - strand, within BACOVA_05397 at 878.699 kb on + strand at 878.743 kb on + strand at 878.744 kb on - strand at 878.748 kb on + strand at 878.748 kb on + strand at 878.751 kb on - strand at 878.761 kb on - strand at 878.774 kb on + strand at 878.780 kb on - strand at 878.786 kb on - strand at 878.786 kb on - strand at 878.801 kb on + strand at 878.802 kb on - strand at 878.827 kb on - strand at 878.833 kb on - strand at 878.833 kb on - strand at 878.854 kb on + strand at 878.861 kb on + strand at 878.861 kb on + strand at 878.883 kb on - strand at 878.922 kb on + strand at 878.941 kb on + strand at 878.941 kb on + strand at 878.943 kb on + strand at 878.949 kb on - strand at 878.955 kb on - strand at 878.957 kb on - strand at 878.965 kb on - strand at 878.965 kb on - strand at 878.965 kb on - strand at 878.974 kb on - strand at 879.017 kb on + strand at 879.021 kb on - strand at 879.049 kb on - strand at 879.062 kb on - strand at 879.080 kb on + strand at 879.083 kb on + strand at 879.139 kb on + strand at 879.151 kb on + strand at 879.160 kb on + strand at 879.161 kb on - strand at 879.164 kb on - strand at 879.167 kb on - strand at 879.204 kb on + strand at 879.256 kb on - strand, within BACOVA_05398 at 879.316 kb on + strand, within BACOVA_05398 at 879.316 kb on + strand, within BACOVA_05398 at 879.317 kb on - strand, within BACOVA_05398 at 879.321 kb on + strand, within BACOVA_05398 at 879.322 kb on - strand, within BACOVA_05398 at 879.327 kb on - strand, within BACOVA_05398 at 879.331 kb on - strand, within BACOVA_05398 at 879.331 kb on - strand, within BACOVA_05398 at 879.351 kb on + strand, within BACOVA_05398 at 879.370 kb on + strand, within BACOVA_05398 at 879.370 kb on + strand, within BACOVA_05398 at 879.371 kb on - strand, within BACOVA_05398 at 879.371 kb on - strand, within BACOVA_05398 at 879.371 kb on - strand, within BACOVA_05398 at 879.388 kb on - strand, within BACOVA_05398 at 879.395 kb on - strand, within BACOVA_05398 at 879.409 kb on - strand, within BACOVA_05398 at 879.430 kb on + strand, within BACOVA_05398 at 879.437 kb on - strand, within BACOVA_05398 at 879.437 kb on - strand, within BACOVA_05398 at 879.437 kb on - strand, within BACOVA_05398 at 879.439 kb on - strand, within BACOVA_05398 at 879.443 kb on - strand, within BACOVA_05398 at 879.451 kb on + strand, within BACOVA_05398 at 879.451 kb on + strand, within BACOVA_05398 at 879.458 kb on + strand, within BACOVA_05398 at 879.534 kb on + strand, within BACOVA_05398 at 879.534 kb on + strand, within BACOVA_05398 at 879.535 kb on - strand, within BACOVA_05398 at 879.535 kb on - strand, within BACOVA_05398 at 879.535 kb on - strand, within BACOVA_05398 at 879.535 kb on - strand, within BACOVA_05398 at 879.553 kb on + strand, within BACOVA_05398 at 879.557 kb on - strand, within BACOVA_05398 at 879.557 kb on - strand, within BACOVA_05398 at 879.561 kb on + strand, within BACOVA_05398 at 879.561 kb on + strand, within BACOVA_05398 at 879.562 kb on - strand, within BACOVA_05398 at 879.562 kb on - strand, within BACOVA_05398 at 879.565 kb on + strand, within BACOVA_05398 at 879.596 kb on - strand, within BACOVA_05398 at 879.616 kb on + strand, within BACOVA_05398 at 879.621 kb on - strand, within BACOVA_05398 at 879.621 kb on - strand, within BACOVA_05398 at 879.621 kb on - strand, within BACOVA_05398 at 879.621 kb on - strand, within BACOVA_05398 at 879.632 kb on - strand, within BACOVA_05398 at 879.789 kb on + strand, within BACOVA_05398 at 879.793 kb on - strand, within BACOVA_05398 at 879.817 kb on - strand, within BACOVA_05398 at 879.831 kb on - strand, within BACOVA_05398 at 879.850 kb on - strand, within BACOVA_05398 at 879.852 kb on + strand, within BACOVA_05398 at 879.853 kb on - strand, within BACOVA_05398 at 879.853 kb on - strand, within BACOVA_05398 at 879.855 kb on + strand, within BACOVA_05398 at 879.855 kb on + strand, within BACOVA_05398 at 879.904 kb on + strand, within BACOVA_05398 at 879.930 kb on - strand, within BACOVA_05398 at 879.931 kb on + strand, within BACOVA_05398 at 879.931 kb on + strand, within BACOVA_05398 at 879.968 kb on - strand, within BACOVA_05398 at 879.970 kb on + strand, within BACOVA_05398 at 879.971 kb on - strand, within BACOVA_05398 at 879.989 kb on + strand at 879.989 kb on + strand at 879.995 kb on - strand at 880.000 kb on - strand at 880.005 kb on - strand at 880.005 kb on - strand at 880.007 kb on - strand at 880.007 kb on - strand at 880.063 kb on - strand at 880.093 kb on - strand at 880.158 kb on + strand at 880.159 kb on - strand at 880.175 kb on + strand at 880.175 kb on + strand at 880.175 kb on + strand at 880.176 kb on - strand at 880.188 kb on - strand, within BACOVA_05399 at 880.207 kb on + strand, within BACOVA_05399 at 880.265 kb on - strand, within BACOVA_05399 at 880.265 kb on - strand, within BACOVA_05399 at 880.267 kb on - strand, within BACOVA_05399 at 880.267 kb on - strand, within BACOVA_05399 at 880.300 kb on + strand, within BACOVA_05399 at 880.313 kb on - strand, within BACOVA_05399 at 880.315 kb on + strand, within BACOVA_05399 at 880.389 kb on - strand, within BACOVA_05399 at 880.446 kb on - strand, within BACOVA_05399 at 880.574 kb on - strand at 880.580 kb on + strand at 880.581 kb on - strand at 880.581 kb on - strand at 880.583 kb on + strand at 880.586 kb on + strand at 880.635 kb on + strand at 880.635 kb on + strand at 880.739 kb on + strand, within BACOVA_05400 at 880.740 kb on - strand, within BACOVA_05400 at 880.792 kb on + strand, within BACOVA_05400 at 880.793 kb on - strand, within BACOVA_05400 at 880.793 kb on - strand, within BACOVA_05400 at 880.793 kb on - strand, within BACOVA_05400 at 880.794 kb on + strand, within BACOVA_05400 at 880.794 kb on + strand, within BACOVA_05400 at 880.797 kb on - strand, within BACOVA_05400 at 880.797 kb on - strand, within BACOVA_05400 at 880.807 kb on - strand, within BACOVA_05400 at 880.818 kb on - strand, within BACOVA_05400 at 880.818 kb on - strand, within BACOVA_05400 at 880.867 kb on - strand, within BACOVA_05400 at 880.869 kb on - strand, within BACOVA_05400 at 880.869 kb on - strand, within BACOVA_05400 at 880.958 kb on + strand at 880.958 kb on + strand at 880.958 kb on + strand at 880.959 kb on - strand at 880.966 kb on + strand at 880.966 kb on + strand at 880.967 kb on - strand at 880.992 kb on + strand at 880.998 kb on + strand at 880.999 kb on - strand at 881.015 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 10 mM (C) remove 878,148 + -0.2 878,148 + +0.3 878,148 + -1.3 878,149 - +0.6 878,150 + -0.9 878,151 - +0.3 878,252 - BACOVA_05397 0.19 -3.0 878,297 + BACOVA_05397 0.26 -1.0 878,298 - BACOVA_05397 0.26 -0.4 878,302 + BACOVA_05397 0.27 -0.8 878,303 - BACOVA_05397 0.27 -0.9 878,437 + BACOVA_05397 0.48 +0.1 878,438 - BACOVA_05397 0.48 +1.2 878,438 - BACOVA_05397 0.48 -0.8 878,511 + BACOVA_05397 0.60 +0.6 878,599 + BACOVA_05397 0.74 -0.6 878,600 - BACOVA_05397 0.74 -0.7 878,611 + BACOVA_05397 0.76 +0.8 878,611 + BACOVA_05397 0.76 +0.0 878,611 + BACOVA_05397 0.76 +1.0 878,666 - BACOVA_05397 0.85 +0.7 878,666 - BACOVA_05397 0.85 +0.5 878,673 + BACOVA_05397 0.86 -0.6 878,674 - BACOVA_05397 0.86 -1.2 878,674 - BACOVA_05397 0.86 +1.0 878,676 + BACOVA_05397 0.86 -1.3 878,695 - BACOVA_05397 0.89 -0.4 878,699 + -0.9 878,743 + -0.9 878,744 - +0.0 878,748 + +0.7 878,748 + +0.7 878,751 - +0.4 878,761 - +0.2 878,774 + +0.4 878,780 - +0.4 878,786 - +1.0 878,786 - +1.0 878,801 + -0.2 878,802 - +0.4 878,827 - -0.0 878,833 - +0.4 878,833 - -0.6 878,854 + +0.4 878,861 + -0.9 878,861 + -0.8 878,883 - -0.8 878,922 + -0.7 878,941 + +0.0 878,941 + -1.2 878,943 + -1.0 878,949 - +0.6 878,955 - -0.3 878,957 - +0.0 878,965 - +0.6 878,965 - -0.7 878,965 - -0.7 878,974 - +0.5 879,017 + +0.6 879,021 - +0.2 879,049 - +0.6 879,062 - +0.0 879,080 + +0.7 879,083 + +0.1 879,139 + -0.7 879,151 + -0.7 879,160 + +0.7 879,161 - +0.9 879,164 - -0.7 879,167 - +1.2 879,204 + -0.1 879,256 - BACOVA_05398 0.15 -0.5 879,316 + BACOVA_05398 0.21 +0.4 879,316 + BACOVA_05398 0.21 +0.0 879,317 - BACOVA_05398 0.21 +0.3 879,321 + BACOVA_05398 0.22 -0.9 879,322 - BACOVA_05398 0.22 -0.3 879,327 - BACOVA_05398 0.22 +1.7 879,331 - BACOVA_05398 0.23 +0.2 879,331 - BACOVA_05398 0.23 +0.5 879,351 + BACOVA_05398 0.25 -0.8 879,370 + BACOVA_05398 0.27 -0.1 879,370 + BACOVA_05398 0.27 -0.3 879,371 - BACOVA_05398 0.27 +0.8 879,371 - BACOVA_05398 0.27 -2.0 879,371 - BACOVA_05398 0.27 +0.3 879,388 - BACOVA_05398 0.29 -0.2 879,395 - BACOVA_05398 0.29 -0.2 879,409 - BACOVA_05398 0.31 +0.2 879,430 + BACOVA_05398 0.33 +0.5 879,437 - BACOVA_05398 0.34 -0.1 879,437 - BACOVA_05398 0.34 -0.8 879,437 - BACOVA_05398 0.34 +0.8 879,439 - BACOVA_05398 0.34 -0.6 879,443 - BACOVA_05398 0.34 -0.3 879,451 + BACOVA_05398 0.35 +0.0 879,451 + BACOVA_05398 0.35 +1.0 879,458 + BACOVA_05398 0.36 +0.3 879,534 + BACOVA_05398 0.43 -1.9 879,534 + BACOVA_05398 0.43 +1.0 879,535 - BACOVA_05398 0.44 +0.0 879,535 - BACOVA_05398 0.44 -1.0 879,535 - BACOVA_05398 0.44 +0.0 879,535 - BACOVA_05398 0.44 -0.8 879,553 + BACOVA_05398 0.45 +0.3 879,557 - BACOVA_05398 0.46 +0.3 879,557 - BACOVA_05398 0.46 +0.0 879,561 + BACOVA_05398 0.46 +0.0 879,561 + BACOVA_05398 0.46 +1.5 879,562 - BACOVA_05398 0.46 -0.9 879,562 - BACOVA_05398 0.46 +0.2 879,565 + BACOVA_05398 0.47 +1.2 879,596 - BACOVA_05398 0.50 +0.2 879,616 + BACOVA_05398 0.52 +0.7 879,621 - BACOVA_05398 0.52 +1.0 879,621 - BACOVA_05398 0.52 -0.7 879,621 - BACOVA_05398 0.52 +0.7 879,621 - BACOVA_05398 0.52 -0.6 879,632 - BACOVA_05398 0.54 +0.3 879,789 + BACOVA_05398 0.70 -0.3 879,793 - BACOVA_05398 0.70 +1.0 879,817 - BACOVA_05398 0.73 +0.6 879,831 - BACOVA_05398 0.74 +0.3 879,850 - BACOVA_05398 0.76 -0.3 879,852 + BACOVA_05398 0.76 +0.2 879,853 - BACOVA_05398 0.76 -0.7 879,853 - BACOVA_05398 0.76 +1.6 879,855 + BACOVA_05398 0.76 +0.6 879,855 + BACOVA_05398 0.76 +0.3 879,904 + BACOVA_05398 0.81 +0.4 879,930 - BACOVA_05398 0.84 -0.5 879,931 + BACOVA_05398 0.84 +0.1 879,931 + BACOVA_05398 0.84 +0.1 879,968 - BACOVA_05398 0.88 -0.4 879,970 + BACOVA_05398 0.88 +0.0 879,971 - BACOVA_05398 0.88 +0.7 879,989 + +0.3 879,989 + -0.8 879,995 - +0.2 880,000 - +0.2 880,005 - +0.1 880,005 - +0.3 880,007 - -1.0 880,007 - -0.2 880,063 - -0.7 880,093 - +0.0 880,158 + -0.6 880,159 - +2.0 880,175 + -2.0 880,175 + -1.2 880,175 + -0.1 880,176 - -0.2 880,188 - BACOVA_05399 0.10 -0.3 880,207 + BACOVA_05399 0.15 -1.2 880,265 - BACOVA_05399 0.28 -0.2 880,265 - BACOVA_05399 0.28 +0.4 880,267 - BACOVA_05399 0.28 -1.0 880,267 - BACOVA_05399 0.28 -1.6 880,300 + BACOVA_05399 0.36 +0.3 880,313 - BACOVA_05399 0.39 +0.5 880,315 + BACOVA_05399 0.40 -0.5 880,389 - BACOVA_05399 0.57 -0.8 880,446 - BACOVA_05399 0.70 -0.9 880,574 - +0.3 880,580 + -0.5 880,581 - +1.5 880,581 - -0.3 880,583 + -0.5 880,586 + -0.5 880,635 + -0.1 880,635 + +0.4 880,739 + BACOVA_05400 0.37 +0.2 880,740 - BACOVA_05400 0.37 -0.5 880,792 + BACOVA_05400 0.51 +0.3 880,793 - BACOVA_05400 0.52 +1.1 880,793 - BACOVA_05400 0.52 -1.0 880,793 - BACOVA_05400 0.52 +0.0 880,794 + BACOVA_05400 0.52 +1.0 880,794 + BACOVA_05400 0.52 -0.2 880,797 - BACOVA_05400 0.53 -0.3 880,797 - BACOVA_05400 0.53 -0.7 880,807 - BACOVA_05400 0.55 -0.4 880,818 - BACOVA_05400 0.58 -0.2 880,818 - BACOVA_05400 0.58 -0.6 880,867 - BACOVA_05400 0.72 -2.2 880,869 - BACOVA_05400 0.72 +1.4 880,869 - BACOVA_05400 0.72 +0.2 880,958 + -0.6 880,958 + +0.4 880,958 + +1.2 880,959 - -0.9 880,966 + +0.0 880,966 + -0.5 880,967 - +0.4 880,992 + -0.7 880,998 + -0.6 880,999 - +0.5 881,015 - +1.0
Or see this region's nucleotide sequence