Experiment: D-Glucose 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03208 and BACOVA_03209 are separated by 202 nucleotides BACOVA_03209 and BACOVA_03210 are separated by 78 nucleotides BACOVA_03210 and BACOVA_03211 are separated by 79 nucleotides BACOVA_03211 and BACOVA_03212 are separated by 81 nucleotides BACOVA_03212 and BACOVA_03213 are separated by 13 nucleotides BACOVA_03213 and BACOVA_03214 are separated by 29 nucleotides
BACOVA_03208: BACOVA_03208 - hypothetical protein, at 299,442 to 299,909
_03208
BACOVA_03209: BACOVA_03209 - hypothetical protein, at 300,112 to 300,387
_03209
BACOVA_03210: BACOVA_03210 - hypothetical protein, at 300,466 to 300,570
_03210
BACOVA_03211: BACOVA_03211 - hypothetical protein, at 300,650 to 301,702
_03211
BACOVA_03212: BACOVA_03212 - hypothetical protein, at 301,784 to 302,293
_03212
BACOVA_03213: BACOVA_03213 - hypothetical protein, at 302,307 to 302,672
_03213
BACOVA_03214: BACOVA_03214 - hypothetical protein, at 302,702 to 304,012
_03214
Position (kb) 300
301
302 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 299.660 kb on + strand, within BACOVA_03208 at 299.661 kb on - strand, within BACOVA_03208 at 299.661 kb on - strand, within BACOVA_03208 at 299.661 kb on - strand, within BACOVA_03208 at 299.664 kb on + strand, within BACOVA_03208 at 299.664 kb on + strand, within BACOVA_03208 at 299.687 kb on + strand, within BACOVA_03208 at 299.688 kb on - strand, within BACOVA_03208 at 299.693 kb on + strand, within BACOVA_03208 at 299.693 kb on + strand, within BACOVA_03208 at 299.693 kb on + strand, within BACOVA_03208 at 299.693 kb on + strand, within BACOVA_03208 at 299.693 kb on + strand, within BACOVA_03208 at 299.693 kb on + strand, within BACOVA_03208 at 299.694 kb on - strand, within BACOVA_03208 at 299.694 kb on - strand, within BACOVA_03208 at 299.694 kb on - strand, within BACOVA_03208 at 299.696 kb on + strand, within BACOVA_03208 at 299.724 kb on + strand, within BACOVA_03208 at 299.725 kb on - strand, within BACOVA_03208 at 299.797 kb on + strand, within BACOVA_03208 at 299.797 kb on + strand, within BACOVA_03208 at 299.797 kb on + strand, within BACOVA_03208 at 299.799 kb on + strand, within BACOVA_03208 at 299.799 kb on + strand, within BACOVA_03208 at 299.800 kb on - strand, within BACOVA_03208 at 299.800 kb on - strand, within BACOVA_03208 at 299.802 kb on + strand, within BACOVA_03208 at 299.840 kb on - strand, within BACOVA_03208 at 299.840 kb on - strand, within BACOVA_03208 at 299.840 kb on - strand, within BACOVA_03208 at 299.843 kb on + strand, within BACOVA_03208 at 299.844 kb on - strand, within BACOVA_03208 at 299.844 kb on - strand, within BACOVA_03208 at 299.844 kb on - strand, within BACOVA_03208 at 299.851 kb on - strand, within BACOVA_03208 at 299.856 kb on - strand, within BACOVA_03208 at 299.860 kb on - strand, within BACOVA_03208 at 299.869 kb on + strand at 299.869 kb on + strand at 299.874 kb on + strand at 299.891 kb on + strand at 299.896 kb on + strand at 299.896 kb on + strand at 299.897 kb on - strand at 299.932 kb on - strand at 300.023 kb on - strand at 300.049 kb on - strand at 300.100 kb on - strand at 300.108 kb on + strand at 300.108 kb on + strand at 300.109 kb on - strand at 300.110 kb on + strand at 300.111 kb on - strand at 300.111 kb on - strand at 300.138 kb on + strand at 300.231 kb on + strand, within BACOVA_03209 at 300.232 kb on - strand, within BACOVA_03209 at 300.271 kb on - strand, within BACOVA_03209 at 300.316 kb on + strand, within BACOVA_03209 at 300.316 kb on + strand, within BACOVA_03209 at 300.318 kb on + strand, within BACOVA_03209 at 300.321 kb on - strand, within BACOVA_03209 at 300.321 kb on - strand, within BACOVA_03209 at 300.352 kb on + strand, within BACOVA_03209 at 300.354 kb on + strand, within BACOVA_03209 at 300.360 kb on - strand at 300.368 kb on - strand at 300.371 kb on + strand at 300.372 kb on - strand at 300.386 kb on - strand at 300.454 kb on + strand at 300.454 kb on + strand at 300.455 kb on - strand at 300.455 kb on - strand at 300.455 kb on - strand at 300.465 kb on - strand at 300.465 kb on - strand at 300.536 kb on + strand, within BACOVA_03210 at 300.552 kb on + strand, within BACOVA_03210 at 300.554 kb on + strand, within BACOVA_03210 at 300.554 kb on + strand, within BACOVA_03210 at 300.554 kb on + strand, within BACOVA_03210 at 300.555 kb on - strand, within BACOVA_03210 at 300.555 kb on - strand, within BACOVA_03210 at 300.577 kb on - strand at 300.588 kb on - strand at 300.634 kb on - strand at 300.634 kb on - strand at 300.670 kb on - strand at 300.697 kb on + strand at 300.706 kb on - strand at 300.753 kb on + strand at 300.818 kb on + strand, within BACOVA_03211 at 300.819 kb on - strand, within BACOVA_03211 at 300.821 kb on + strand, within BACOVA_03211 at 300.822 kb on - strand, within BACOVA_03211 at 300.990 kb on - strand, within BACOVA_03211 at 300.990 kb on - strand, within BACOVA_03211 at 300.991 kb on + strand, within BACOVA_03211 at 300.991 kb on + strand, within BACOVA_03211 at 300.992 kb on - strand, within BACOVA_03211 at 300.992 kb on - strand, within BACOVA_03211 at 300.992 kb on - strand, within BACOVA_03211 at 301.012 kb on + strand, within BACOVA_03211 at 301.012 kb on + strand, within BACOVA_03211 at 301.013 kb on - strand, within BACOVA_03211 at 301.013 kb on - strand, within BACOVA_03211 at 301.013 kb on - strand, within BACOVA_03211 at 301.057 kb on + strand, within BACOVA_03211 at 301.062 kb on - strand, within BACOVA_03211 at 301.063 kb on + strand, within BACOVA_03211 at 301.063 kb on + strand, within BACOVA_03211 at 301.064 kb on - strand, within BACOVA_03211 at 301.066 kb on + strand, within BACOVA_03211 at 301.094 kb on + strand, within BACOVA_03211 at 301.095 kb on - strand, within BACOVA_03211 at 301.097 kb on - strand, within BACOVA_03211 at 301.117 kb on - strand, within BACOVA_03211 at 301.117 kb on - strand, within BACOVA_03211 at 301.120 kb on + strand, within BACOVA_03211 at 301.120 kb on + strand, within BACOVA_03211 at 301.120 kb on + strand, within BACOVA_03211 at 301.120 kb on + strand, within BACOVA_03211 at 301.121 kb on - strand, within BACOVA_03211 at 301.121 kb on - strand, within BACOVA_03211 at 301.238 kb on + strand, within BACOVA_03211 at 301.238 kb on + strand, within BACOVA_03211 at 301.238 kb on + strand, within BACOVA_03211 at 301.239 kb on - strand, within BACOVA_03211 at 301.241 kb on + strand, within BACOVA_03211 at 301.241 kb on + strand, within BACOVA_03211 at 301.243 kb on + strand, within BACOVA_03211 at 301.244 kb on - strand, within BACOVA_03211 at 301.274 kb on + strand, within BACOVA_03211 at 301.275 kb on - strand, within BACOVA_03211 at 301.281 kb on - strand, within BACOVA_03211 at 301.285 kb on + strand, within BACOVA_03211 at 301.358 kb on + strand, within BACOVA_03211 at 301.359 kb on - strand, within BACOVA_03211 at 301.359 kb on - strand, within BACOVA_03211 at 301.359 kb on - strand, within BACOVA_03211 at 301.364 kb on + strand, within BACOVA_03211 at 301.365 kb on - strand, within BACOVA_03211 at 301.372 kb on + strand, within BACOVA_03211 at 301.372 kb on + strand, within BACOVA_03211 at 301.372 kb on + strand, within BACOVA_03211 at 301.373 kb on - strand, within BACOVA_03211 at 301.376 kb on - strand, within BACOVA_03211 at 301.415 kb on - strand, within BACOVA_03211 at 301.417 kb on + strand, within BACOVA_03211 at 301.426 kb on - strand, within BACOVA_03211 at 301.426 kb on - strand, within BACOVA_03211 at 301.449 kb on - strand, within BACOVA_03211 at 301.451 kb on + strand, within BACOVA_03211 at 301.486 kb on + strand, within BACOVA_03211 at 301.557 kb on - strand, within BACOVA_03211 at 301.557 kb on - strand, within BACOVA_03211 at 301.626 kb on - strand at 301.656 kb on + strand at 301.684 kb on + strand at 301.685 kb on - strand at 301.689 kb on - strand at 301.701 kb on - strand at 301.721 kb on + strand at 301.743 kb on + strand at 301.743 kb on + strand at 301.743 kb on + strand at 301.744 kb on - strand at 301.774 kb on - strand at 301.789 kb on + strand at 301.819 kb on - strand at 301.861 kb on + strand, within BACOVA_03212 at 301.862 kb on - strand, within BACOVA_03212 at 301.862 kb on - strand, within BACOVA_03212 at 301.873 kb on + strand, within BACOVA_03212 at 301.897 kb on + strand, within BACOVA_03212 at 301.898 kb on - strand, within BACOVA_03212 at 301.898 kb on - strand, within BACOVA_03212 at 301.903 kb on + strand, within BACOVA_03212 at 301.927 kb on + strand, within BACOVA_03212 at 302.028 kb on + strand, within BACOVA_03212 at 302.028 kb on + strand, within BACOVA_03212 at 302.037 kb on + strand, within BACOVA_03212 at 302.065 kb on + strand, within BACOVA_03212 at 302.079 kb on + strand, within BACOVA_03212 at 302.083 kb on + strand, within BACOVA_03212 at 302.084 kb on - strand, within BACOVA_03212 at 302.084 kb on - strand, within BACOVA_03212 at 302.084 kb on - strand, within BACOVA_03212 at 302.084 kb on - strand, within BACOVA_03212 at 302.153 kb on + strand, within BACOVA_03212 at 302.162 kb on - strand, within BACOVA_03212 at 302.162 kb on - strand, within BACOVA_03212 at 302.178 kb on + strand, within BACOVA_03212 at 302.181 kb on + strand, within BACOVA_03212 at 302.182 kb on - strand, within BACOVA_03212 at 302.182 kb on - strand, within BACOVA_03212 at 302.185 kb on + strand, within BACOVA_03212 at 302.185 kb on + strand, within BACOVA_03212 at 302.186 kb on - strand, within BACOVA_03212 at 302.275 kb on - strand at 302.281 kb on - strand at 302.281 kb on - strand at 302.346 kb on + strand, within BACOVA_03213 at 302.347 kb on - strand, within BACOVA_03213 at 302.347 kb on - strand, within BACOVA_03213 at 302.351 kb on + strand, within BACOVA_03213 at 302.351 kb on + strand, within BACOVA_03213 at 302.352 kb on - strand, within BACOVA_03213 at 302.357 kb on - strand, within BACOVA_03213 at 302.368 kb on - strand, within BACOVA_03213 at 302.368 kb on - strand, within BACOVA_03213 at 302.395 kb on - strand, within BACOVA_03213 at 302.411 kb on - strand, within BACOVA_03213 at 302.462 kb on + strand, within BACOVA_03213 at 302.464 kb on + strand, within BACOVA_03213 at 302.464 kb on + strand, within BACOVA_03213 at 302.563 kb on + strand, within BACOVA_03213 at 302.564 kb on - strand, within BACOVA_03213 at 302.585 kb on + strand, within BACOVA_03213 at 302.587 kb on + strand, within BACOVA_03213 at 302.588 kb on - strand, within BACOVA_03213 at 302.647 kb on + strand at 302.647 kb on + strand at 302.647 kb on + strand at 302.647 kb on + strand at 302.648 kb on - strand at 302.648 kb on - strand at 302.654 kb on + strand at 302.692 kb on - strand at 302.692 kb on - strand at 302.695 kb on + strand at 302.696 kb on - strand at 302.698 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 10 mM (C) remove 299,660 + BACOVA_03208 0.47 +0.4 299,661 - BACOVA_03208 0.47 +0.2 299,661 - BACOVA_03208 0.47 -0.0 299,661 - BACOVA_03208 0.47 -0.6 299,664 + BACOVA_03208 0.47 +0.8 299,664 + BACOVA_03208 0.47 +1.0 299,687 + BACOVA_03208 0.52 +0.7 299,688 - BACOVA_03208 0.53 -0.3 299,693 + BACOVA_03208 0.54 +0.4 299,693 + BACOVA_03208 0.54 +0.7 299,693 + BACOVA_03208 0.54 -1.6 299,693 + BACOVA_03208 0.54 -0.8 299,693 + BACOVA_03208 0.54 +0.7 299,693 + BACOVA_03208 0.54 -0.3 299,694 - BACOVA_03208 0.54 +0.5 299,694 - BACOVA_03208 0.54 +0.3 299,694 - BACOVA_03208 0.54 -0.5 299,696 + BACOVA_03208 0.54 +1.3 299,724 + BACOVA_03208 0.60 -0.6 299,725 - BACOVA_03208 0.60 +0.1 299,797 + BACOVA_03208 0.76 +0.3 299,797 + BACOVA_03208 0.76 +0.3 299,797 + BACOVA_03208 0.76 -0.8 299,799 + BACOVA_03208 0.76 -1.0 299,799 + BACOVA_03208 0.76 -1.2 299,800 - BACOVA_03208 0.76 -0.9 299,800 - BACOVA_03208 0.76 +1.2 299,802 + BACOVA_03208 0.77 -0.0 299,840 - BACOVA_03208 0.85 +0.6 299,840 - BACOVA_03208 0.85 -0.5 299,840 - BACOVA_03208 0.85 -0.0 299,843 + BACOVA_03208 0.86 +1.0 299,844 - BACOVA_03208 0.86 -0.4 299,844 - BACOVA_03208 0.86 -0.0 299,844 - BACOVA_03208 0.86 +0.1 299,851 - BACOVA_03208 0.87 -0.2 299,856 - BACOVA_03208 0.88 -0.2 299,860 - BACOVA_03208 0.89 -0.3 299,869 + +1.0 299,869 + -0.6 299,874 + -1.3 299,891 + +0.7 299,896 + -0.9 299,896 + -0.6 299,897 - +1.0 299,932 - -0.0 300,023 - -0.5 300,049 - +1.2 300,100 - +1.2 300,108 + +0.1 300,108 + -0.0 300,109 - -0.7 300,110 + -1.5 300,111 - +0.9 300,111 - -0.3 300,138 + +2.0 300,231 + BACOVA_03209 0.43 +0.6 300,232 - BACOVA_03209 0.43 +0.9 300,271 - BACOVA_03209 0.58 +0.1 300,316 + BACOVA_03209 0.74 +0.5 300,316 + BACOVA_03209 0.74 +0.2 300,318 + BACOVA_03209 0.75 -0.4 300,321 - BACOVA_03209 0.76 +0.0 300,321 - BACOVA_03209 0.76 +0.3 300,352 + BACOVA_03209 0.87 -0.4 300,354 + BACOVA_03209 0.88 +2.2 300,360 - +0.5 300,368 - +1.0 300,371 + +0.4 300,372 - -1.0 300,386 - -0.0 300,454 + +0.3 300,454 + -2.0 300,455 - +3.0 300,455 - -0.3 300,455 - +0.2 300,465 - -0.8 300,465 - +1.0 300,536 + BACOVA_03210 0.67 -0.3 300,552 + BACOVA_03210 0.82 -0.6 300,554 + BACOVA_03210 0.84 +1.0 300,554 + BACOVA_03210 0.84 -0.3 300,554 + BACOVA_03210 0.84 -0.6 300,555 - BACOVA_03210 0.85 -0.6 300,555 - BACOVA_03210 0.85 -0.4 300,577 - -0.7 300,588 - -0.6 300,634 - -1.0 300,634 - -1.3 300,670 - -1.5 300,697 + -1.3 300,706 - +1.1 300,753 + +0.3 300,818 + BACOVA_03211 0.16 +0.7 300,819 - BACOVA_03211 0.16 -0.2 300,821 + BACOVA_03211 0.16 -0.9 300,822 - BACOVA_03211 0.16 +0.4 300,990 - BACOVA_03211 0.32 -0.4 300,990 - BACOVA_03211 0.32 +0.6 300,991 + BACOVA_03211 0.32 -0.2 300,991 + BACOVA_03211 0.32 +1.0 300,992 - BACOVA_03211 0.32 +0.2 300,992 - BACOVA_03211 0.32 +0.4 300,992 - BACOVA_03211 0.32 +0.7 301,012 + BACOVA_03211 0.34 -0.0 301,012 + BACOVA_03211 0.34 +1.7 301,013 - BACOVA_03211 0.34 -0.4 301,013 - BACOVA_03211 0.34 -0.6 301,013 - BACOVA_03211 0.34 -0.0 301,057 + BACOVA_03211 0.39 -0.1 301,062 - BACOVA_03211 0.39 +0.7 301,063 + BACOVA_03211 0.39 -0.0 301,063 + BACOVA_03211 0.39 +0.5 301,064 - BACOVA_03211 0.39 -0.0 301,066 + BACOVA_03211 0.40 -0.2 301,094 + BACOVA_03211 0.42 +0.4 301,095 - BACOVA_03211 0.42 -0.6 301,097 - BACOVA_03211 0.42 -0.8 301,117 - BACOVA_03211 0.44 +0.3 301,117 - BACOVA_03211 0.44 +0.5 301,120 + BACOVA_03211 0.45 -0.1 301,120 + BACOVA_03211 0.45 +0.8 301,120 + BACOVA_03211 0.45 -2.9 301,120 + BACOVA_03211 0.45 +0.7 301,121 - BACOVA_03211 0.45 -0.3 301,121 - BACOVA_03211 0.45 -1.0 301,238 + BACOVA_03211 0.56 +0.3 301,238 + BACOVA_03211 0.56 -0.9 301,238 + BACOVA_03211 0.56 +0.4 301,239 - BACOVA_03211 0.56 -0.8 301,241 + BACOVA_03211 0.56 -0.4 301,241 + BACOVA_03211 0.56 +1.0 301,243 + BACOVA_03211 0.56 -0.1 301,244 - BACOVA_03211 0.56 -0.2 301,274 + BACOVA_03211 0.59 -0.7 301,275 - BACOVA_03211 0.59 -1.0 301,281 - BACOVA_03211 0.60 +1.0 301,285 + BACOVA_03211 0.60 -0.8 301,358 + BACOVA_03211 0.67 +0.5 301,359 - BACOVA_03211 0.67 +1.0 301,359 - BACOVA_03211 0.67 +0.4 301,359 - BACOVA_03211 0.67 -0.5 301,364 + BACOVA_03211 0.68 +0.4 301,365 - BACOVA_03211 0.68 +0.1 301,372 + BACOVA_03211 0.69 -0.1 301,372 + BACOVA_03211 0.69 +0.3 301,372 + BACOVA_03211 0.69 -0.6 301,373 - BACOVA_03211 0.69 +1.0 301,376 - BACOVA_03211 0.69 -0.9 301,415 - BACOVA_03211 0.73 -0.5 301,417 + BACOVA_03211 0.73 +2.0 301,426 - BACOVA_03211 0.74 -0.4 301,426 - BACOVA_03211 0.74 -0.7 301,449 - BACOVA_03211 0.76 -0.8 301,451 + BACOVA_03211 0.76 +1.2 301,486 + BACOVA_03211 0.79 +0.4 301,557 - BACOVA_03211 0.86 -0.0 301,557 - BACOVA_03211 0.86 -0.7 301,626 - +1.0 301,656 + -0.0 301,684 + +0.3 301,685 - -0.4 301,689 - +0.1 301,701 - -0.6 301,721 + +0.2 301,743 + +0.3 301,743 + -0.5 301,743 + +0.2 301,744 - +1.0 301,774 - -0.2 301,789 + -0.2 301,819 - -0.0 301,861 + BACOVA_03212 0.15 -0.0 301,862 - BACOVA_03212 0.15 -1.4 301,862 - BACOVA_03212 0.15 -0.8 301,873 + BACOVA_03212 0.17 -0.7 301,897 + BACOVA_03212 0.22 +0.6 301,898 - BACOVA_03212 0.22 -0.7 301,898 - BACOVA_03212 0.22 +0.5 301,903 + BACOVA_03212 0.23 +0.3 301,927 + BACOVA_03212 0.28 +0.8 302,028 + BACOVA_03212 0.48 -0.7 302,028 + BACOVA_03212 0.48 +0.6 302,037 + BACOVA_03212 0.50 +0.1 302,065 + BACOVA_03212 0.55 +1.0 302,079 + BACOVA_03212 0.58 +0.7 302,083 + BACOVA_03212 0.59 -0.0 302,084 - BACOVA_03212 0.59 +0.2 302,084 - BACOVA_03212 0.59 -1.1 302,084 - BACOVA_03212 0.59 -1.0 302,084 - BACOVA_03212 0.59 -0.4 302,153 + BACOVA_03212 0.72 +1.4 302,162 - BACOVA_03212 0.74 +0.1 302,162 - BACOVA_03212 0.74 -0.8 302,178 + BACOVA_03212 0.77 +0.6 302,181 + BACOVA_03212 0.78 +0.3 302,182 - BACOVA_03212 0.78 +0.1 302,182 - BACOVA_03212 0.78 +0.2 302,185 + BACOVA_03212 0.79 +0.4 302,185 + BACOVA_03212 0.79 -0.8 302,186 - BACOVA_03212 0.79 -0.0 302,275 - -0.0 302,281 - -0.6 302,281 - -1.0 302,346 + BACOVA_03213 0.11 +1.2 302,347 - BACOVA_03213 0.11 -0.4 302,347 - BACOVA_03213 0.11 -0.4 302,351 + BACOVA_03213 0.12 -1.3 302,351 + BACOVA_03213 0.12 -0.6 302,352 - BACOVA_03213 0.12 -0.4 302,357 - BACOVA_03213 0.14 +0.2 302,368 - BACOVA_03213 0.17 -0.5 302,368 - BACOVA_03213 0.17 -1.1 302,395 - BACOVA_03213 0.24 -0.0 302,411 - BACOVA_03213 0.28 +1.7 302,462 + BACOVA_03213 0.42 -0.6 302,464 + BACOVA_03213 0.43 +0.4 302,464 + BACOVA_03213 0.43 +0.2 302,563 + BACOVA_03213 0.70 -0.3 302,564 - BACOVA_03213 0.70 -0.7 302,585 + BACOVA_03213 0.76 +0.2 302,587 + BACOVA_03213 0.77 +0.4 302,588 - BACOVA_03213 0.77 -0.0 302,647 + +1.6 302,647 + +0.1 302,647 + +1.4 302,647 + -0.6 302,648 - +0.4 302,648 - -1.1 302,654 + +0.3 302,692 - +1.0 302,692 - -1.1 302,695 + +0.3 302,696 - -0.1 302,698 + -0.2
Or see this region's nucleotide sequence