Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03656

Experiment: RCM 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03655 and BACOVA_03656 are separated by 209 nucleotidesBACOVA_03656 and BACOVA_03657 are separated by 151 nucleotides BACOVA_03655: BACOVA_03655 - ABC transporter, ATP-binding protein, at 489,234 to 491,189 _03655 BACOVA_03656: BACOVA_03656 - peptidase family M13, at 491,399 to 493,435 _03656 BACOVA_03657: BACOVA_03657 - putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase, at 493,587 to 495,110 _03657 Position (kb) 491 492 493 494Strain fitness (log2 ratio) -2 -1 0 1 2at 490.456 kb on + strand, within BACOVA_03655at 490.490 kb on + strand, within BACOVA_03655at 490.513 kb on + strand, within BACOVA_03655at 490.513 kb on + strand, within BACOVA_03655at 490.514 kb on - strand, within BACOVA_03655at 490.514 kb on - strand, within BACOVA_03655at 490.601 kb on + strand, within BACOVA_03655at 490.766 kb on - strand, within BACOVA_03655at 490.768 kb on - strand, within BACOVA_03655at 490.808 kb on + strand, within BACOVA_03655at 490.809 kb on - strand, within BACOVA_03655at 490.837 kb on + strand, within BACOVA_03655at 490.838 kb on - strand, within BACOVA_03655at 490.841 kb on + strand, within BACOVA_03655at 490.842 kb on - strand, within BACOVA_03655at 490.904 kb on + strand, within BACOVA_03655at 490.904 kb on + strand, within BACOVA_03655at 490.947 kb on + strand, within BACOVA_03655at 490.948 kb on - strand, within BACOVA_03655at 491.202 kb on - strandat 491.214 kb on + strandat 491.215 kb on - strandat 491.230 kb on + strandat 491.231 kb on - strandat 491.233 kb on - strandat 491.240 kb on + strandat 491.384 kb on - strandat 491.388 kb on - strandat 491.391 kb on + strandat 491.415 kb on - strandat 491.456 kb on - strandat 491.456 kb on - strandat 491.456 kb on - strandat 491.518 kb on + strandat 491.527 kb on + strandat 491.543 kb on + strandat 491.544 kb on - strandat 491.677 kb on + strand, within BACOVA_03656at 491.706 kb on + strand, within BACOVA_03656at 491.707 kb on - strand, within BACOVA_03656at 491.718 kb on - strand, within BACOVA_03656at 491.718 kb on - strand, within BACOVA_03656at 491.820 kb on - strand, within BACOVA_03656at 491.820 kb on - strand, within BACOVA_03656at 491.861 kb on + strand, within BACOVA_03656at 491.862 kb on - strand, within BACOVA_03656at 491.877 kb on + strand, within BACOVA_03656at 491.890 kb on + strand, within BACOVA_03656at 491.908 kb on + strand, within BACOVA_03656at 491.909 kb on - strand, within BACOVA_03656at 491.914 kb on - strand, within BACOVA_03656at 491.914 kb on - strand, within BACOVA_03656at 491.914 kb on - strand, within BACOVA_03656at 491.921 kb on + strand, within BACOVA_03656at 491.957 kb on + strand, within BACOVA_03656at 491.996 kb on - strand, within BACOVA_03656at 491.999 kb on + strand, within BACOVA_03656at 492.049 kb on + strand, within BACOVA_03656at 492.142 kb on + strand, within BACOVA_03656at 492.143 kb on - strand, within BACOVA_03656at 492.143 kb on - strand, within BACOVA_03656at 492.146 kb on + strand, within BACOVA_03656at 492.147 kb on - strand, within BACOVA_03656at 492.187 kb on + strand, within BACOVA_03656at 492.206 kb on + strand, within BACOVA_03656at 492.206 kb on + strand, within BACOVA_03656at 492.250 kb on - strand, within BACOVA_03656at 492.250 kb on - strand, within BACOVA_03656at 492.250 kb on - strand, within BACOVA_03656at 492.290 kb on - strand, within BACOVA_03656at 492.293 kb on - strand, within BACOVA_03656at 492.339 kb on + strand, within BACOVA_03656at 492.339 kb on + strand, within BACOVA_03656at 492.339 kb on + strand, within BACOVA_03656at 492.339 kb on + strand, within BACOVA_03656at 492.339 kb on + strand, within BACOVA_03656at 492.339 kb on + strand, within BACOVA_03656at 492.340 kb on - strand, within BACOVA_03656at 492.361 kb on - strand, within BACOVA_03656at 492.459 kb on + strand, within BACOVA_03656at 492.460 kb on - strand, within BACOVA_03656at 492.494 kb on + strand, within BACOVA_03656at 492.494 kb on + strand, within BACOVA_03656at 492.494 kb on + strand, within BACOVA_03656at 492.494 kb on + strand, within BACOVA_03656at 492.494 kb on + strand, within BACOVA_03656at 492.495 kb on - strand, within BACOVA_03656at 492.495 kb on - strand, within BACOVA_03656at 492.495 kb on - strand, within BACOVA_03656at 492.498 kb on + strand, within BACOVA_03656at 492.507 kb on - strand, within BACOVA_03656at 492.507 kb on - strand, within BACOVA_03656at 492.533 kb on - strand, within BACOVA_03656at 492.538 kb on + strand, within BACOVA_03656at 492.539 kb on - strand, within BACOVA_03656at 492.539 kb on - strand, within BACOVA_03656at 492.578 kb on - strand, within BACOVA_03656at 492.648 kb on + strand, within BACOVA_03656at 492.648 kb on + strand, within BACOVA_03656at 492.654 kb on + strand, within BACOVA_03656at 492.654 kb on + strand, within BACOVA_03656at 492.659 kb on + strand, within BACOVA_03656at 492.747 kb on - strand, within BACOVA_03656at 492.827 kb on + strand, within BACOVA_03656at 492.827 kb on + strand, within BACOVA_03656at 492.828 kb on - strand, within BACOVA_03656at 492.830 kb on - strand, within BACOVA_03656at 492.907 kb on + strand, within BACOVA_03656at 492.914 kb on + strand, within BACOVA_03656at 492.915 kb on - strand, within BACOVA_03656at 492.981 kb on - strand, within BACOVA_03656at 492.981 kb on - strand, within BACOVA_03656at 493.060 kb on + strand, within BACOVA_03656at 493.072 kb on + strand, within BACOVA_03656at 493.216 kb on + strand, within BACOVA_03656at 493.245 kb on - strandat 493.404 kb on + strandat 493.404 kb on + strandat 493.409 kb on - strandat 493.456 kb on + strandat 493.457 kb on - strandat 493.457 kb on - strandat 493.457 kb on - strandat 493.459 kb on - strandat 493.522 kb on + strandat 493.552 kb on + strandat 494.166 kb on + strand, within BACOVA_03657at 494.313 kb on + strand, within BACOVA_03657at 494.313 kb on + strand, within BACOVA_03657at 494.315 kb on + strand, within BACOVA_03657

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Per-strain Table

Position Strand Gene LocusTag Fraction RCM 1 x (C) complex media
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490,456 + BACOVA_03655 0.62 -0.9
490,490 + BACOVA_03655 0.64 +0.1
490,513 + BACOVA_03655 0.65 -0.7
490,513 + BACOVA_03655 0.65 +0.7
490,514 - BACOVA_03655 0.65 -0.6
490,514 - BACOVA_03655 0.65 -0.6
490,601 + BACOVA_03655 0.70 +0.7
490,766 - BACOVA_03655 0.78 -2.5
490,768 - BACOVA_03655 0.78 +0.0
490,808 + BACOVA_03655 0.80 -0.0
490,809 - BACOVA_03655 0.81 +0.5
490,837 + BACOVA_03655 0.82 +0.4
490,838 - BACOVA_03655 0.82 +0.2
490,841 + BACOVA_03655 0.82 -0.6
490,842 - BACOVA_03655 0.82 +0.3
490,904 + BACOVA_03655 0.85 -1.2
490,904 + BACOVA_03655 0.85 +0.5
490,947 + BACOVA_03655 0.88 -0.3
490,948 - BACOVA_03655 0.88 -1.3
491,202 - +0.3
491,214 + -1.2
491,215 - -0.2
491,230 + +0.0
491,231 - +0.2
491,233 - +0.1
491,240 + -0.5
491,384 - +0.2
491,388 - +1.1
491,391 + -0.4
491,415 - -0.3
491,456 - -1.0
491,456 - -0.8
491,456 - +0.2
491,518 + +0.5
491,527 + -0.8
491,543 + +0.4
491,544 - -0.5
491,677 + BACOVA_03656 0.14 -1.5
491,706 + BACOVA_03656 0.15 +0.4
491,707 - BACOVA_03656 0.15 -0.0
491,718 - BACOVA_03656 0.16 +0.1
491,718 - BACOVA_03656 0.16 -0.2
491,820 - BACOVA_03656 0.21 -0.5
491,820 - BACOVA_03656 0.21 +1.9
491,861 + BACOVA_03656 0.23 +1.1
491,862 - BACOVA_03656 0.23 -0.6
491,877 + BACOVA_03656 0.23 -1.1
491,890 + BACOVA_03656 0.24 -2.2
491,908 + BACOVA_03656 0.25 -1.8
491,909 - BACOVA_03656 0.25 -0.8
491,914 - BACOVA_03656 0.25 -0.5
491,914 - BACOVA_03656 0.25 +0.8
491,914 - BACOVA_03656 0.25 +0.7
491,921 + BACOVA_03656 0.26 -0.6
491,957 + BACOVA_03656 0.27 -0.4
491,996 - BACOVA_03656 0.29 -0.3
491,999 + BACOVA_03656 0.29 +0.1
492,049 + BACOVA_03656 0.32 -0.0
492,142 + BACOVA_03656 0.36 -0.1
492,143 - BACOVA_03656 0.37 +1.0
492,143 - BACOVA_03656 0.37 -2.0
492,146 + BACOVA_03656 0.37 -0.8
492,147 - BACOVA_03656 0.37 -1.3
492,187 + BACOVA_03656 0.39 -0.2
492,206 + BACOVA_03656 0.40 -0.5
492,206 + BACOVA_03656 0.40 -0.8
492,250 - BACOVA_03656 0.42 -0.5
492,250 - BACOVA_03656 0.42 -0.1
492,250 - BACOVA_03656 0.42 -2.5
492,290 - BACOVA_03656 0.44 -1.0
492,293 - BACOVA_03656 0.44 +1.1
492,339 + BACOVA_03656 0.46 -2.2
492,339 + BACOVA_03656 0.46 -0.3
492,339 + BACOVA_03656 0.46 +0.5
492,339 + BACOVA_03656 0.46 -0.1
492,339 + BACOVA_03656 0.46 -0.7
492,339 + BACOVA_03656 0.46 -0.6
492,340 - BACOVA_03656 0.46 -0.0
492,361 - BACOVA_03656 0.47 +1.0
492,459 + BACOVA_03656 0.52 +1.2
492,460 - BACOVA_03656 0.52 +2.5
492,494 + BACOVA_03656 0.54 +0.2
492,494 + BACOVA_03656 0.54 -1.0
492,494 + BACOVA_03656 0.54 -0.5
492,494 + BACOVA_03656 0.54 +0.2
492,494 + BACOVA_03656 0.54 +0.5
492,495 - BACOVA_03656 0.54 +1.0
492,495 - BACOVA_03656 0.54 -0.1
492,495 - BACOVA_03656 0.54 +0.9
492,498 + BACOVA_03656 0.54 +0.7
492,507 - BACOVA_03656 0.54 -2.5
492,507 - BACOVA_03656 0.54 +0.8
492,533 - BACOVA_03656 0.56 -0.5
492,538 + BACOVA_03656 0.56 -0.3
492,539 - BACOVA_03656 0.56 +2.1
492,539 - BACOVA_03656 0.56 -1.6
492,578 - BACOVA_03656 0.58 -0.9
492,648 + BACOVA_03656 0.61 -0.6
492,648 + BACOVA_03656 0.61 +0.8
492,654 + BACOVA_03656 0.62 +0.5
492,654 + BACOVA_03656 0.62 +0.5
492,659 + BACOVA_03656 0.62 +0.1
492,747 - BACOVA_03656 0.66 +0.5
492,827 + BACOVA_03656 0.70 -0.0
492,827 + BACOVA_03656 0.70 +0.4
492,828 - BACOVA_03656 0.70 +0.1
492,830 - BACOVA_03656 0.70 -0.4
492,907 + BACOVA_03656 0.74 +0.4
492,914 + BACOVA_03656 0.74 -0.5
492,915 - BACOVA_03656 0.74 -1.0
492,981 - BACOVA_03656 0.78 -1.5
492,981 - BACOVA_03656 0.78 +1.5
493,060 + BACOVA_03656 0.82 +0.5
493,072 + BACOVA_03656 0.82 -0.9
493,216 + BACOVA_03656 0.89 -0.6
493,245 - -0.2
493,404 + +0.4
493,404 + -0.2
493,409 - -0.3
493,456 + -0.5
493,457 - +0.5
493,457 - +0.5
493,457 - +1.5
493,459 - -1.5
493,522 + -0.2
493,552 + +0.3
494,166 + BACOVA_03657 0.38 -1.9
494,313 + BACOVA_03657 0.48 -0.5
494,313 + BACOVA_03657 0.48 -0.1
494,315 + BACOVA_03657 0.48 -0.3

Or see this region's nucleotide sequence