Experiment: RCM 1 x (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_03231 and BACOVA_03232 are separated by 309 nucleotides BACOVA_03232 and BACOVA_03233 are separated by 179 nucleotides
BACOVA_03231: BACOVA_03231 - hypothetical protein, at 320,102 to 320,848
_03231
BACOVA_03232: BACOVA_03232 - hypothetical protein, at 321,158 to 321,664
_03232
BACOVA_03233: BACOVA_03233 - glucose-6-phosphate isomerase, at 321,844 to 323,181
_03233
Position (kb) 321
322 Strain fitness (log2 ratio) -2
-1
0
1 at 320.181 kb on + strand, within BACOVA_03231 at 320.187 kb on + strand, within BACOVA_03231 at 320.187 kb on + strand, within BACOVA_03231 at 320.188 kb on - strand, within BACOVA_03231 at 320.188 kb on - strand, within BACOVA_03231 at 320.228 kb on + strand, within BACOVA_03231 at 320.271 kb on + strand, within BACOVA_03231 at 320.272 kb on + strand, within BACOVA_03231 at 320.342 kb on + strand, within BACOVA_03231 at 320.344 kb on + strand, within BACOVA_03231 at 320.345 kb on - strand, within BACOVA_03231 at 320.345 kb on - strand, within BACOVA_03231 at 320.346 kb on + strand, within BACOVA_03231 at 320.346 kb on + strand, within BACOVA_03231 at 320.347 kb on - strand, within BACOVA_03231 at 320.363 kb on + strand, within BACOVA_03231 at 320.363 kb on + strand, within BACOVA_03231 at 320.482 kb on + strand, within BACOVA_03231 at 320.485 kb on + strand, within BACOVA_03231 at 320.549 kb on + strand, within BACOVA_03231 at 320.555 kb on + strand, within BACOVA_03231 at 320.555 kb on + strand, within BACOVA_03231 at 320.556 kb on - strand, within BACOVA_03231 at 320.564 kb on + strand, within BACOVA_03231 at 320.642 kb on - strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.681 kb on + strand, within BACOVA_03231 at 320.683 kb on + strand, within BACOVA_03231 at 320.716 kb on - strand, within BACOVA_03231 at 320.720 kb on + strand, within BACOVA_03231 at 320.720 kb on + strand, within BACOVA_03231 at 320.721 kb on - strand, within BACOVA_03231 at 320.721 kb on - strand, within BACOVA_03231 at 320.725 kb on + strand, within BACOVA_03231 at 320.774 kb on + strand at 320.850 kb on - strand at 320.858 kb on + strand at 320.859 kb on - strand at 320.863 kb on + strand at 320.867 kb on + strand at 320.871 kb on - strand at 320.946 kb on - strand at 320.955 kb on + strand at 320.956 kb on - strand at 320.988 kb on + strand at 320.988 kb on + strand at 320.989 kb on - strand at 320.989 kb on - strand at 321.006 kb on + strand at 321.011 kb on + strand at 321.029 kb on + strand at 321.029 kb on + strand at 321.029 kb on + strand at 321.030 kb on - strand at 321.030 kb on - strand at 321.030 kb on - strand at 321.032 kb on + strand at 321.032 kb on + strand at 321.032 kb on + strand at 321.033 kb on - strand at 321.033 kb on - strand at 321.049 kb on + strand at 321.075 kb on - strand at 321.095 kb on + strand at 321.096 kb on - strand at 321.098 kb on - strand at 321.101 kb on + strand at 321.155 kb on - strand at 321.155 kb on - strand at 321.155 kb on - strand at 321.172 kb on - strand at 321.172 kb on - strand at 321.174 kb on + strand at 321.174 kb on + strand at 321.174 kb on + strand at 321.174 kb on + strand at 321.175 kb on - strand at 321.183 kb on + strand at 321.183 kb on + strand at 321.196 kb on + strand at 321.229 kb on + strand, within BACOVA_03232 at 321.229 kb on + strand, within BACOVA_03232 at 321.248 kb on + strand, within BACOVA_03232 at 321.425 kb on - strand, within BACOVA_03232 at 321.427 kb on + strand, within BACOVA_03232 at 321.427 kb on + strand, within BACOVA_03232 at 321.433 kb on + strand, within BACOVA_03232 at 321.434 kb on - strand, within BACOVA_03232 at 321.453 kb on + strand, within BACOVA_03232 at 321.458 kb on - strand, within BACOVA_03232 at 321.555 kb on + strand, within BACOVA_03232 at 321.559 kb on + strand, within BACOVA_03232 at 321.560 kb on - strand, within BACOVA_03232 at 321.560 kb on - strand, within BACOVA_03232 at 321.580 kb on - strand, within BACOVA_03232 at 321.587 kb on + strand, within BACOVA_03232 at 321.588 kb on - strand, within BACOVA_03232 at 321.636 kb on + strand at 321.658 kb on + strand at 321.659 kb on - strand at 321.679 kb on + strand at 321.694 kb on + strand at 321.714 kb on - strand at 321.714 kb on - strand at 321.758 kb on + strand at 321.784 kb on + strand at 321.784 kb on + strand at 321.785 kb on - strand at 321.785 kb on - strand at 321.785 kb on - strand at 321.785 kb on - strand at 321.786 kb on + strand at 321.786 kb on + strand at 321.786 kb on + strand at 321.787 kb on - strand at 321.787 kb on - strand at 321.791 kb on + strand at 321.791 kb on + strand at 321.791 kb on + strand at 321.791 kb on + strand at 321.792 kb on - strand at 321.792 kb on - strand at 321.813 kb on + strand at 321.827 kb on + strand at 321.828 kb on - strand at 321.868 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction RCM 1 x (C) complex media remove 320,181 + BACOVA_03231 0.11 +0.7 320,187 + BACOVA_03231 0.11 +0.1 320,187 + BACOVA_03231 0.11 +0.1 320,188 - BACOVA_03231 0.12 -0.9 320,188 - BACOVA_03231 0.12 +1.2 320,228 + BACOVA_03231 0.17 +0.5 320,271 + BACOVA_03231 0.23 -0.3 320,272 + BACOVA_03231 0.23 +1.0 320,342 + BACOVA_03231 0.32 -0.9 320,344 + BACOVA_03231 0.32 -1.2 320,345 - BACOVA_03231 0.33 +0.5 320,345 - BACOVA_03231 0.33 +0.9 320,346 + BACOVA_03231 0.33 -0.3 320,346 + BACOVA_03231 0.33 +0.9 320,347 - BACOVA_03231 0.33 -0.4 320,363 + BACOVA_03231 0.35 +0.2 320,363 + BACOVA_03231 0.35 -0.4 320,482 + BACOVA_03231 0.51 -2.6 320,485 + BACOVA_03231 0.51 +0.8 320,549 + BACOVA_03231 0.60 +0.1 320,555 + BACOVA_03231 0.61 +1.6 320,555 + BACOVA_03231 0.61 -0.2 320,556 - BACOVA_03231 0.61 -0.1 320,564 + BACOVA_03231 0.62 -0.7 320,642 - BACOVA_03231 0.72 -0.1 320,681 + BACOVA_03231 0.78 +0.4 320,681 + BACOVA_03231 0.78 -0.2 320,681 + BACOVA_03231 0.78 +0.3 320,681 + BACOVA_03231 0.78 +0.9 320,683 + BACOVA_03231 0.78 +0.5 320,716 - BACOVA_03231 0.82 -0.1 320,720 + BACOVA_03231 0.83 +0.2 320,720 + BACOVA_03231 0.83 -0.6 320,721 - BACOVA_03231 0.83 -1.0 320,721 - BACOVA_03231 0.83 +0.2 320,725 + BACOVA_03231 0.83 -0.3 320,774 + -1.0 320,850 - -0.8 320,858 + -0.6 320,859 - +1.4 320,863 + +0.2 320,867 + -0.4 320,871 - +0.2 320,946 - -1.2 320,955 + -0.2 320,956 - +0.3 320,988 + +0.6 320,988 + -0.3 320,989 - -0.7 320,989 - -0.6 321,006 + -0.6 321,011 + +0.1 321,029 + +0.9 321,029 + -0.2 321,029 + -0.2 321,030 - +0.3 321,030 - -0.5 321,030 - -0.2 321,032 + -0.7 321,032 + -0.4 321,032 + -0.1 321,033 - -1.2 321,033 - +0.1 321,049 + -1.7 321,075 - -1.2 321,095 + +0.2 321,096 - -0.1 321,098 - +0.2 321,101 + -1.2 321,155 - +0.4 321,155 - -0.9 321,155 - -1.3 321,172 - -1.0 321,172 - +0.1 321,174 + +0.6 321,174 + +0.0 321,174 + +0.3 321,174 + -0.1 321,175 - +1.0 321,183 + -0.4 321,183 + -0.5 321,196 + +0.3 321,229 + BACOVA_03232 0.14 +0.3 321,229 + BACOVA_03232 0.14 -0.3 321,248 + BACOVA_03232 0.18 +0.1 321,425 - BACOVA_03232 0.53 -0.1 321,427 + BACOVA_03232 0.53 -0.4 321,427 + BACOVA_03232 0.53 -0.2 321,433 + BACOVA_03232 0.54 +0.4 321,434 - BACOVA_03232 0.54 +1.2 321,453 + BACOVA_03232 0.58 -0.4 321,458 - BACOVA_03232 0.59 +0.6 321,555 + BACOVA_03232 0.78 -0.6 321,559 + BACOVA_03232 0.79 -0.1 321,560 - BACOVA_03232 0.79 +0.4 321,560 - BACOVA_03232 0.79 -0.5 321,580 - BACOVA_03232 0.83 -0.7 321,587 + BACOVA_03232 0.85 -0.3 321,588 - BACOVA_03232 0.85 +0.2 321,636 + +1.1 321,658 + -0.4 321,659 - -0.6 321,679 + -0.4 321,694 + +0.5 321,714 - -0.6 321,714 - +1.1 321,758 + +0.2 321,784 + +0.0 321,784 + -0.6 321,785 - -0.2 321,785 - -0.4 321,785 - -1.3 321,785 - -0.4 321,786 + +0.0 321,786 + -1.1 321,786 + -0.5 321,787 - -0.5 321,787 - +1.1 321,791 + +0.0 321,791 + -0.3 321,791 + -1.2 321,791 + -0.3 321,792 - +0.2 321,792 - +0.0 321,813 + -0.7 321,827 + -0.6 321,828 - -0.4 321,868 - -0.2
Or see this region's nucleotide sequence