Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05495

Experiment: GAM 1 x (C) complex media

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GAM 1 x (C) complex media
1,002,955	+		BACOVA_05493	0.68	+0.3
1,002,969	-		BACOVA_05493	0.68	+0.6
1,002,969	-		BACOVA_05493	0.68	+0.7
1,002,969	-		BACOVA_05493	0.68	+0.4
1,002,969	-		BACOVA_05493	0.68	+0.2
1,002,973	-		BACOVA_05493	0.68	+0.6
1,003,037	-		BACOVA_05493	0.71	+0.5
1,003,060	-		BACOVA_05493	0.72	-0.7
1,003,071	-		BACOVA_05493	0.72	+0.2
1,003,071	-		BACOVA_05493	0.72	-1.2
1,003,073	+		BACOVA_05493	0.72	-0.4
1,003,074	-		BACOVA_05493	0.72	-0.1
1,003,074	-		BACOVA_05493	0.72	+0.5
1,003,074	-		BACOVA_05493	0.72	-1.2
1,003,077	+		BACOVA_05493	0.72	-0.1
1,003,099	-		BACOVA_05493	0.73	+0.7
1,003,104	-		BACOVA_05493	0.73	-0.7
1,003,163	+		BACOVA_05493	0.76	+0.8
1,003,164	-		BACOVA_05493	0.76	+0.2
1,003,234	+		BACOVA_05493	0.78	+1.8
1,003,234	+		BACOVA_05493	0.78	-3.7
1,003,236	+		BACOVA_05493	0.78	-0.2
1,003,236	+		BACOVA_05493	0.78	-2.0
1,003,250	-		BACOVA_05493	0.79	+0.8
1,003,284	+		BACOVA_05493	0.80	-1.0
1,003,284	+		BACOVA_05493	0.80	-0.5
1,003,284	+		BACOVA_05493	0.80	-1.0
1,003,284	+		BACOVA_05493	0.80	+0.8
1,003,284	+		BACOVA_05493	0.80	-0.7
1,003,285	-		BACOVA_05493	0.80	+0.6
1,003,325	-		BACOVA_05493	0.82	-0.1
1,003,334	-		BACOVA_05493	0.82	-0.5
1,003,339	-		BACOVA_05493	0.82	-0.3
1,003,339	-		BACOVA_05493	0.82	-0.6
1,003,364	+		BACOVA_05493	0.83	+0.4
1,003,365	-		BACOVA_05493	0.83	-0.3
1,003,424	-		BACOVA_05493	0.86	-0.9
1,003,453	-		BACOVA_05493	0.87	+0.8
1,003,559	-				+1.2
1,003,565	+				-0.9
1,003,565	+				+0.3
1,003,565	+				-1.2
1,003,565	+				+0.3
1,003,566	-				+0.2
1,003,566	-				+0.0
1,003,567	+				+0.0
1,003,577	+				+0.6
1,003,578	-				-0.7
1,003,578	-				-1.3
1,003,578	-				-0.9
1,003,606	-				-0.2
1,003,642	+				+0.8
1,003,709	+				-0.7
1,003,709	+				-0.6
1,003,709	+				+0.3
1,003,709	+				-1.6
1,003,710	-				+1.4
1,003,711	+				-0.7
1,003,711	+				-0.6
1,003,712	-				+0.4
1,003,712	-				-0.5
1,003,713	+				+0.6
1,003,713	+				+0.2
1,003,713	+				-0.7
1,003,714	-				-0.8
1,003,716	-				+0.7
1,003,716	-				+0.4
1,003,775	-				+0.5
1,003,775	-				-3.8
1,003,780	+				-0.2
1,003,781	-				+1.4
1,003,840	-				+0.3
1,003,878	+				+1.2
1,003,879	-				+0.5
1,003,880	+				-0.4
1,003,881	-				-0.4
1,003,881	-				-1.2
1,003,918	+				-0.7
1,003,932	-				+0.7
1,004,011	+				+0.4
1,004,011	+				-1.2
1,004,012	-				-0.2
1,004,416	+		BACOVA_05495	0.14	-0.3
1,004,417	-		BACOVA_05495	0.14	+0.8
1,004,447	+		BACOVA_05495	0.15	-0.3
1,004,448	-		BACOVA_05495	0.15	+0.6
1,004,496	-		BACOVA_05495	0.16	+0.3
1,004,497	+		BACOVA_05495	0.16	-0.0
1,004,498	-		BACOVA_05495	0.16	+0.2
1,004,504	+		BACOVA_05495	0.17	-0.6
1,004,546	+		BACOVA_05495	0.18	-0.7
1,004,546	+		BACOVA_05495	0.18	-2.5
1,004,573	-		BACOVA_05495	0.19	+0.1
1,004,670	-		BACOVA_05495	0.21	-1.3
1,004,690	+		BACOVA_05495	0.22	+0.1
1,004,732	-		BACOVA_05495	0.23	-0.7
1,004,862	-		BACOVA_05495	0.27	+1.7
1,004,868	+		BACOVA_05495	0.27	+1.4
1,004,869	-		BACOVA_05495	0.27	-1.0
1,004,869	-		BACOVA_05495	0.27	+0.9
1,004,967	-		BACOVA_05495	0.30	+0.7
1,005,106	+		BACOVA_05495	0.34	-0.7
1,005,111	+		BACOVA_05495	0.34	-1.2
1,005,134	-		BACOVA_05495	0.35	+0.1
1,005,155	+		BACOVA_05495	0.35	+0.3
1,005,166	+		BACOVA_05495	0.35	-1.0
1,005,166	+		BACOVA_05495	0.35	-0.5
1,005,167	-		BACOVA_05495	0.35	-0.1
1,005,244	+		BACOVA_05495	0.38	+1.0
1,005,245	-		BACOVA_05495	0.38	-1.0
1,005,245	-		BACOVA_05495	0.38	-0.3
1,005,249	-		BACOVA_05495	0.38	-0.8
1,005,379	+		BACOVA_05495	0.41	+0.3
1,005,384	+		BACOVA_05495	0.42	-0.0
1,005,384	+		BACOVA_05495	0.42	+1.1
1,005,404	-		BACOVA_05495	0.42	+0.4
1,005,432	-		BACOVA_05495	0.43	+1.5
1,005,458	+		BACOVA_05495	0.44	-1.0
1,005,460	+		BACOVA_05495	0.44	-0.1
1,005,463	-		BACOVA_05495	0.44	+0.4
1,005,550	+		BACOVA_05495	0.46	+0.5
1,005,554	+		BACOVA_05495	0.46	-0.3
1,005,555	-		BACOVA_05495	0.46	+1.0
1,005,555	-		BACOVA_05495	0.46	+0.4
1,005,555	-		BACOVA_05495	0.46	-1.2
1,005,734	+		BACOVA_05495	0.52	-1.6
1,005,735	-		BACOVA_05495	0.52	-0.4
1,005,846	+		BACOVA_05495	0.55	+0.3
1,005,846	+		BACOVA_05495	0.55	+0.3
1,005,901	-		BACOVA_05495	0.56	-1.2
1,005,916	+		BACOVA_05495	0.57	+0.3
1,005,917	-		BACOVA_05495	0.57	-1.0
1,005,917	-		BACOVA_05495	0.57	-1.5
1,005,917	-		BACOVA_05495	0.57	+0.7
1,005,925	-		BACOVA_05495	0.57	-0.8
1,005,925	-		BACOVA_05495	0.57	+0.7
1,005,930	+		BACOVA_05495	0.57	+0.2
1,005,930	+		BACOVA_05495	0.57	+0.6
1,005,930	+		BACOVA_05495	0.57	+0.4
1,005,930	+		BACOVA_05495	0.57	+0.5
1,005,930	+		BACOVA_05495	0.57	-0.9
1,005,931	-		BACOVA_05495	0.57	+0.8
1,005,935	+		BACOVA_05495	0.57	+0.4
1,005,987	-		BACOVA_05495	0.59	-1.3
1,006,043	+		BACOVA_05495	0.60	+0.5
1,006,043	+		BACOVA_05495	0.60	+0.8
1,006,120	+		BACOVA_05495	0.62	-0.7
1,006,121	-		BACOVA_05495	0.63	-0.6
1,006,134	-		BACOVA_05495	0.63	-0.1
1,006,137	-		BACOVA_05495	0.63	-0.5
1,006,139	-		BACOVA_05495	0.63	-0.3
1,006,171	-		BACOVA_05495	0.64	-0.7
1,006,185	-		BACOVA_05495	0.64	-1.2
1,006,185	-		BACOVA_05495	0.64	+1.3
1,006,185	-		BACOVA_05495	0.64	-2.6
1,006,187	+		BACOVA_05495	0.64	-1.8
1,006,187	+		BACOVA_05495	0.64	-0.2
1,006,187	+		BACOVA_05495	0.64	+0.5
1,006,189	+		BACOVA_05495	0.64	-0.2
1,006,190	-		BACOVA_05495	0.64	-2.0
1,006,228	-		BACOVA_05495	0.66	+0.7
1,006,241	+		BACOVA_05495	0.66	+0.2
1,006,250	-		BACOVA_05495	0.66	-0.2
1,006,250	-		BACOVA_05495	0.66	-0.3
1,006,302	-		BACOVA_05495	0.68	-1.0
1,006,311	-		BACOVA_05495	0.68	+0.3
1,006,311	-		BACOVA_05495	0.68	-0.5
1,006,311	-		BACOVA_05495	0.68	-0.5
1,006,361	+		BACOVA_05495	0.69	-1.2
1,006,470	-		BACOVA_05495	0.72	-0.4
1,006,471	+		BACOVA_05495	0.72	-1.4
1,006,493	-		BACOVA_05495	0.73	+0.1
1,006,511	+		BACOVA_05495	0.74	+0.6
1,006,514	+		BACOVA_05495	0.74	+0.2
1,006,515	-		BACOVA_05495	0.74	-0.1
1,006,515	-		BACOVA_05495	0.74	+1.3
1,006,515	-		BACOVA_05495	0.74	+1.5
1,006,515	-		BACOVA_05495	0.74	-0.5
1,006,533	+		BACOVA_05495	0.74	+0.0
1,006,533	+		BACOVA_05495	0.74	+1.3
1,006,534	-		BACOVA_05495	0.74	-0.6
1,006,548	-		BACOVA_05495	0.75	+0.7
1,006,548	-		BACOVA_05495	0.75	+2.4
1,006,548	-		BACOVA_05495	0.75	-0.5
1,006,548	-		BACOVA_05495	0.75	+1.3
1,006,625	-		BACOVA_05495	0.77	-0.1
1,006,625	-		BACOVA_05495	0.77	+0.9
1,006,701	+		BACOVA_05495	0.79	+0.4
1,006,707	+		BACOVA_05495	0.79	-2.3
1,006,728	-		BACOVA_05495	0.80	-0.5
1,006,739	-		BACOVA_05495	0.80	+0.8
1,006,755	+		BACOVA_05495	0.81	-0.2
1,006,772	+		BACOVA_05495	0.81	+0.0
1,006,772	+		BACOVA_05495	0.81	-1.7
1,006,773	-		BACOVA_05495	0.81	+0.4
1,006,899	-		BACOVA_05495	0.85	-0.0
1,006,905	-		BACOVA_05495	0.85	-0.7
1,006,906	+		BACOVA_05495	0.85	+1.4
1,006,907	-		BACOVA_05495	0.85	+0.2
1,006,939	+		BACOVA_05495	0.86	-0.2
1,006,940	-		BACOVA_05495	0.86	+0.8
1,006,940	-		BACOVA_05495	0.86	+1.5
1,007,008	+		BACOVA_05495	0.88	-0.4
1,007,009	-		BACOVA_05495	0.88	+0.1
1,007,012	+		BACOVA_05495	0.88	+1.2
1,007,046	-		BACOVA_05495	0.89	+0.4
1,007,058	+		BACOVA_05495	0.89	-0.9
1,007,066	+		BACOVA_05495	0.89	+0.7
1,007,124	-				+0.4
1,007,124	-				+0.8
1,007,141	+				+0.6
1,007,158	-				-0.7
1,007,158	-				+0.5
1,007,162	-				-0.4
1,007,168	+				+0.3
1,007,177	+				-1.2
1,007,178	-				+0.1
1,007,188	+				-0.7
1,007,188	+				-0.3
1,007,192	+				+0.3
1,007,193	-				-0.5
1,007,193	-				-0.5
1,007,202	-				+0.1
1,007,204	+				+0.4
1,007,204	+				+1.6
1,007,204	+				-0.2
1,007,215	+				-1.7
1,007,249	-				-1.0
1,007,281	-				+0.3
1,007,313	-				-1.0
1,007,313	-				-0.5
1,007,339	-				+0.4
1,007,339	-				-0.9
1,007,393	+				+1.2
1,007,394	-				+0.3
1,007,398	+				+1.2
1,007,472	-		BACOVA_05494	0.35	-1.7
1,007,508	+		BACOVA_05494	0.54	+0.4
1,007,532	+		BACOVA_05494	0.67	-0.5
1,007,533	-		BACOVA_05494	0.68	-1.7
1,007,536	+		BACOVA_05494	0.69	-0.5
1,007,561	+		BACOVA_05494	0.83	-1.1
1,007,589	-				-0.7
1,007,599	+				-1.0
1,007,599	+				-1.9
1,007,604	+				+0.4
1,007,615	-				-1.5
1,007,670	-		BACOVA_05496	0.15	-0.2
1,007,672	+		BACOVA_05496	0.15	-0.5
1,007,723	+		BACOVA_05496	0.24	-1.2
1,007,724	-		BACOVA_05496	0.24	-0.7
1,007,735	+		BACOVA_05496	0.26	-0.9
1,007,736	-		BACOVA_05496	0.27	-0.7
1,007,736	-		BACOVA_05496	0.27	-0.4
1,007,837	+		BACOVA_05496	0.45	-0.4
1,007,841	+		BACOVA_05496	0.46	+0.3
1,007,841	+		BACOVA_05496	0.46	+0.8
1,007,842	-		BACOVA_05496	0.46	-0.6
1,007,842	-		BACOVA_05496	0.46	-1.2
1,007,842	-		BACOVA_05496	0.46	+0.2
1,007,857	+		BACOVA_05496	0.49	-0.3
1,007,947	+		BACOVA_05496	0.65	+0.3
1,007,951	+		BACOVA_05496	0.66	-0.9
1,007,951	+		BACOVA_05496	0.66	-0.7
1,007,951	+		BACOVA_05496	0.66	-2.0
1,007,951	+		BACOVA_05496	0.66	-1.0
1,007,957	+		BACOVA_05496	0.67	-1.3
1,007,957	+		BACOVA_05496	0.67	+0.8
1,007,957	+		BACOVA_05496	0.67	-0.1
1,007,960	-		BACOVA_05496	0.67	-0.2
1,007,969	+		BACOVA_05496	0.69	+0.3
1,007,969	+		BACOVA_05496	0.69	+0.3
1,007,974	+		BACOVA_05496	0.70	-0.5
1,007,974	+		BACOVA_05496	0.70	-0.9
1,007,974	+		BACOVA_05496	0.70	-1.5
1,007,974	+		BACOVA_05496	0.70	-1.7
1,007,976	+		BACOVA_05496	0.70	-1.2
1,008,007	-		BACOVA_05496	0.76	+0.3
1,008,045	-		BACOVA_05496	0.83	-2.6
1,008,087	-				-1.6
1,008,087	-				+0.2
1,008,101	+				-0.7
1,008,104	-				-0.2
1,008,118	-				-0.0
1,008,139	-				-0.7
1,008,139	-				-0.7
1,008,253	+				+0.0
1,008,301	+				-1.7
1,008,301	+				-1.0
1,008,302	-				+0.8
1,008,427	+		BACOVA_05497	0.14	+0.8
1,008,427	+		BACOVA_05497	0.14	-1.7
1,008,427	+		BACOVA_05497	0.14	-1.6