Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02810

Experiment: GAM 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02809 and BACOVA_02810 overlap by 10 nucleotidesBACOVA_02810 and BACOVA_02811 are separated by 6 nucleotides BACOVA_02809: BACOVA_02809 - hypothetical protein, at 276,299 to 277,957 _02809 BACOVA_02810: BACOVA_02810 - hypothetical protein, at 277,948 to 278,064 _02810 BACOVA_02811: BACOVA_02811 - arylsulfatase, at 278,071 to 279,597 _02811 Position (kb) 277 278 279Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 276.948 kb on + strand, within BACOVA_02809at 276.948 kb on + strand, within BACOVA_02809at 276.959 kb on + strand, within BACOVA_02809at 276.976 kb on + strand, within BACOVA_02809at 277.075 kb on + strand, within BACOVA_02809at 277.166 kb on + strand, within BACOVA_02809at 277.167 kb on - strand, within BACOVA_02809at 277.167 kb on - strand, within BACOVA_02809at 277.202 kb on + strand, within BACOVA_02809at 277.209 kb on + strand, within BACOVA_02809at 277.210 kb on - strand, within BACOVA_02809at 277.226 kb on - strand, within BACOVA_02809at 277.271 kb on + strand, within BACOVA_02809at 277.283 kb on + strand, within BACOVA_02809at 277.284 kb on - strand, within BACOVA_02809at 277.284 kb on - strand, within BACOVA_02809at 277.292 kb on - strand, within BACOVA_02809at 277.301 kb on - strand, within BACOVA_02809at 277.375 kb on - strand, within BACOVA_02809at 277.523 kb on + strand, within BACOVA_02809at 277.563 kb on - strand, within BACOVA_02809at 277.581 kb on - strand, within BACOVA_02809at 277.584 kb on + strand, within BACOVA_02809at 277.627 kb on - strand, within BACOVA_02809at 277.629 kb on - strand, within BACOVA_02809at 277.640 kb on + strand, within BACOVA_02809at 277.657 kb on + strand, within BACOVA_02809at 277.714 kb on + strand, within BACOVA_02809at 277.714 kb on + strand, within BACOVA_02809at 277.715 kb on - strand, within BACOVA_02809at 277.715 kb on - strand, within BACOVA_02809at 277.859 kb on - strandat 277.870 kb on - strandat 277.870 kb on - strandat 277.910 kb on + strandat 277.923 kb on - strandat 277.953 kb on + strandat 277.953 kb on + strandat 277.957 kb on + strandat 277.957 kb on + strandat 277.957 kb on + strandat 277.957 kb on + strandat 277.958 kb on - strandat 278.005 kb on + strand, within BACOVA_02810at 278.035 kb on - strand, within BACOVA_02810at 278.047 kb on + strand, within BACOVA_02810at 278.048 kb on - strand, within BACOVA_02810at 278.077 kb on + strandat 278.106 kb on - strandat 278.209 kb on - strandat 278.220 kb on - strandat 278.271 kb on + strand, within BACOVA_02811at 278.272 kb on - strand, within BACOVA_02811at 278.273 kb on + strand, within BACOVA_02811at 278.274 kb on - strand, within BACOVA_02811at 278.274 kb on - strand, within BACOVA_02811at 278.286 kb on + strand, within BACOVA_02811at 278.286 kb on + strand, within BACOVA_02811at 278.307 kb on - strand, within BACOVA_02811at 278.336 kb on - strand, within BACOVA_02811at 278.381 kb on + strand, within BACOVA_02811at 278.419 kb on + strand, within BACOVA_02811at 278.420 kb on - strand, within BACOVA_02811at 278.450 kb on - strand, within BACOVA_02811at 278.518 kb on - strand, within BACOVA_02811at 278.518 kb on - strand, within BACOVA_02811at 278.541 kb on + strand, within BACOVA_02811at 278.542 kb on - strand, within BACOVA_02811at 278.542 kb on - strand, within BACOVA_02811at 278.543 kb on + strand, within BACOVA_02811at 278.543 kb on + strand, within BACOVA_02811at 278.544 kb on - strand, within BACOVA_02811at 278.609 kb on + strand, within BACOVA_02811at 278.650 kb on - strand, within BACOVA_02811at 278.813 kb on + strand, within BACOVA_02811at 278.862 kb on + strand, within BACOVA_02811at 278.867 kb on - strand, within BACOVA_02811at 278.873 kb on + strand, within BACOVA_02811at 278.922 kb on + strand, within BACOVA_02811at 278.922 kb on + strand, within BACOVA_02811at 278.922 kb on + strand, within BACOVA_02811at 278.922 kb on + strand, within BACOVA_02811at 278.923 kb on - strand, within BACOVA_02811at 278.925 kb on - strand, within BACOVA_02811at 278.950 kb on + strand, within BACOVA_02811at 278.950 kb on + strand, within BACOVA_02811at 278.951 kb on - strand, within BACOVA_02811at 278.958 kb on + strand, within BACOVA_02811at 278.961 kb on + strand, within BACOVA_02811at 278.962 kb on - strand, within BACOVA_02811at 278.962 kb on - strand, within BACOVA_02811at 278.962 kb on - strand, within BACOVA_02811at 279.031 kb on - strand, within BACOVA_02811at 279.038 kb on + strand, within BACOVA_02811

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Per-strain Table

Position Strand Gene LocusTag Fraction GAM 1 x (C) complex media
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276,948 + BACOVA_02809 0.39 +0.8
276,948 + BACOVA_02809 0.39 +0.2
276,959 + BACOVA_02809 0.40 +0.6
276,976 + BACOVA_02809 0.41 -0.0
277,075 + BACOVA_02809 0.47 -1.1
277,166 + BACOVA_02809 0.52 -0.1
277,167 - BACOVA_02809 0.52 +0.9
277,167 - BACOVA_02809 0.52 -1.1
277,202 + BACOVA_02809 0.54 +0.2
277,209 + BACOVA_02809 0.55 +0.3
277,210 - BACOVA_02809 0.55 +0.2
277,226 - BACOVA_02809 0.56 -0.3
277,271 + BACOVA_02809 0.59 +0.5
277,283 + BACOVA_02809 0.59 -0.5
277,284 - BACOVA_02809 0.59 -0.4
277,284 - BACOVA_02809 0.59 +0.2
277,292 - BACOVA_02809 0.60 -1.1
277,301 - BACOVA_02809 0.60 +0.9
277,375 - BACOVA_02809 0.65 -3.0
277,523 + BACOVA_02809 0.74 -1.0
277,563 - BACOVA_02809 0.76 -1.8
277,581 - BACOVA_02809 0.77 -0.9
277,584 + BACOVA_02809 0.77 -0.3
277,627 - BACOVA_02809 0.80 +1.9
277,629 - BACOVA_02809 0.80 -0.0
277,640 + BACOVA_02809 0.81 -0.6
277,657 + BACOVA_02809 0.82 +0.4
277,714 + BACOVA_02809 0.85 -0.7
277,714 + BACOVA_02809 0.85 -0.7
277,715 - BACOVA_02809 0.85 +0.3
277,715 - BACOVA_02809 0.85 -0.8
277,859 - +0.9
277,870 - -0.7
277,870 - -0.1
277,910 + -1.4
277,923 - -0.7
277,953 + -0.5
277,953 + -0.8
277,957 + -0.0
277,957 + +0.3
277,957 + -1.5
277,957 + -0.7
277,958 - -0.1
278,005 + BACOVA_02810 0.49 +0.6
278,035 - BACOVA_02810 0.74 -0.1
278,047 + BACOVA_02810 0.85 +0.5
278,048 - BACOVA_02810 0.85 -0.1
278,077 + +2.0
278,106 - +0.0
278,209 - -0.2
278,220 - -0.9
278,271 + BACOVA_02811 0.13 +0.3
278,272 - BACOVA_02811 0.13 -0.1
278,273 + BACOVA_02811 0.13 +0.1
278,274 - BACOVA_02811 0.13 -1.0
278,274 - BACOVA_02811 0.13 +0.3
278,286 + BACOVA_02811 0.14 -0.5
278,286 + BACOVA_02811 0.14 -2.3
278,307 - BACOVA_02811 0.15 +0.1
278,336 - BACOVA_02811 0.17 +1.2
278,381 + BACOVA_02811 0.20 -0.6
278,419 + BACOVA_02811 0.23 -2.2
278,420 - BACOVA_02811 0.23 +0.2
278,450 - BACOVA_02811 0.25 -2.8
278,518 - BACOVA_02811 0.29 -1.4
278,518 - BACOVA_02811 0.29 -0.1
278,541 + BACOVA_02811 0.31 -1.0
278,542 - BACOVA_02811 0.31 -0.2
278,542 - BACOVA_02811 0.31 -0.9
278,543 + BACOVA_02811 0.31 -1.1
278,543 + BACOVA_02811 0.31 -0.4
278,544 - BACOVA_02811 0.31 -1.4
278,609 + BACOVA_02811 0.35 -0.6
278,650 - BACOVA_02811 0.38 +0.3
278,813 + BACOVA_02811 0.49 +0.5
278,862 + BACOVA_02811 0.52 +0.2
278,867 - BACOVA_02811 0.52 -0.9
278,873 + BACOVA_02811 0.53 +0.4
278,922 + BACOVA_02811 0.56 +0.4
278,922 + BACOVA_02811 0.56 -0.4
278,922 + BACOVA_02811 0.56 -1.5
278,922 + BACOVA_02811 0.56 +0.7
278,923 - BACOVA_02811 0.56 +0.4
278,925 - BACOVA_02811 0.56 -0.4
278,950 + BACOVA_02811 0.58 +0.2
278,950 + BACOVA_02811 0.58 -0.3
278,951 - BACOVA_02811 0.58 +1.0
278,958 + BACOVA_02811 0.58 -0.5
278,961 + BACOVA_02811 0.58 -0.0
278,962 - BACOVA_02811 0.58 +0.3
278,962 - BACOVA_02811 0.58 +0.2
278,962 - BACOVA_02811 0.58 +1.2
279,031 - BACOVA_02811 0.63 +0.5
279,038 + BACOVA_02811 0.63 +0.6

Or see this region's nucleotide sequence