Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02791

Experiment: GAM 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02789 and BACOVA_02790 are separated by 90 nucleotidesBACOVA_02790 and BACOVA_02791 are separated by 15 nucleotidesBACOVA_02791 and BACOVA_02792 are separated by 761 nucleotides BACOVA_02789: BACOVA_02789 - hypothetical protein, at 243,735 to 244,868 _02789 BACOVA_02790: BACOVA_02790 - hypothetical protein, at 244,959 to 245,096 _02790 BACOVA_02791: BACOVA_02791 - hypothetical protein, at 245,112 to 246,839 _02791 BACOVA_02792: BACOVA_02792 - hypothetical protein, at 247,601 to 248,062 _02792 Position (kb) 245 246 247Strain fitness (log2 ratio) -2 -1 0 1 2at 244.140 kb on - strand, within BACOVA_02789at 244.199 kb on + strand, within BACOVA_02789at 244.199 kb on + strand, within BACOVA_02789at 244.200 kb on - strand, within BACOVA_02789at 244.228 kb on + strand, within BACOVA_02789at 244.237 kb on - strand, within BACOVA_02789at 244.252 kb on + strand, within BACOVA_02789at 244.253 kb on - strand, within BACOVA_02789at 244.253 kb on - strand, within BACOVA_02789at 244.271 kb on + strand, within BACOVA_02789at 244.272 kb on - strand, within BACOVA_02789at 244.328 kb on + strand, within BACOVA_02789at 244.337 kb on + strand, within BACOVA_02789at 244.413 kb on + strand, within BACOVA_02789at 244.414 kb on - strand, within BACOVA_02789at 244.449 kb on - strand, within BACOVA_02789at 244.484 kb on - strand, within BACOVA_02789at 244.512 kb on + strand, within BACOVA_02789at 244.513 kb on - strand, within BACOVA_02789at 244.516 kb on + strand, within BACOVA_02789at 244.516 kb on + strand, within BACOVA_02789at 244.516 kb on + strand, within BACOVA_02789at 244.517 kb on - strand, within BACOVA_02789at 244.529 kb on + strand, within BACOVA_02789at 244.530 kb on - strand, within BACOVA_02789at 244.538 kb on - strand, within BACOVA_02789at 244.539 kb on + strand, within BACOVA_02789at 244.540 kb on - strand, within BACOVA_02789at 244.542 kb on - strand, within BACOVA_02789at 244.724 kb on + strand, within BACOVA_02789at 244.741 kb on + strand, within BACOVA_02789at 244.741 kb on + strand, within BACOVA_02789at 244.741 kb on + strand, within BACOVA_02789at 244.742 kb on - strand, within BACOVA_02789at 244.742 kb on - strand, within BACOVA_02789at 244.867 kb on - strandat 244.873 kb on + strandat 244.895 kb on - strandat 244.900 kb on + strandat 244.901 kb on - strandat 244.901 kb on - strandat 244.930 kb on + strandat 244.948 kb on - strandat 244.956 kb on + strandat 244.990 kb on + strand, within BACOVA_02790at 244.991 kb on - strand, within BACOVA_02790at 244.991 kb on - strand, within BACOVA_02790at 245.058 kb on + strand, within BACOVA_02790at 245.074 kb on + strand, within BACOVA_02790at 245.085 kb on + strandat 245.111 kb on + strandat 245.111 kb on + strandat 245.190 kb on - strandat 245.617 kb on - strand, within BACOVA_02791at 246.855 kb on + strandat 246.855 kb on + strandat 246.855 kb on + strandat 246.856 kb on - strandat 246.856 kb on - strandat 246.856 kb on - strandat 246.860 kb on - strandat 246.933 kb on - strandat 246.933 kb on - strandat 246.958 kb on + strandat 246.958 kb on + strandat 246.976 kb on + strandat 246.989 kb on + strandat 246.999 kb on + strandat 247.000 kb on - strandat 247.000 kb on - strandat 247.045 kb on + strandat 247.045 kb on + strandat 247.055 kb on + strandat 247.068 kb on + strandat 247.069 kb on - strandat 247.069 kb on - strandat 247.069 kb on - strandat 247.071 kb on - strandat 247.071 kb on - strandat 247.102 kb on + strandat 247.122 kb on + strandat 247.123 kb on - strandat 247.141 kb on - strandat 247.151 kb on - strandat 247.154 kb on - strandat 247.174 kb on - strandat 247.190 kb on + strandat 247.204 kb on + strandat 247.205 kb on - strandat 247.212 kb on + strandat 247.212 kb on + strandat 247.213 kb on - strandat 247.213 kb on - strandat 247.213 kb on - strandat 247.213 kb on - strandat 247.233 kb on + strandat 247.233 kb on + strandat 247.276 kb on - strandat 247.323 kb on + strandat 247.351 kb on + strandat 247.370 kb on + strandat 247.371 kb on - strandat 247.376 kb on + strandat 247.397 kb on + strandat 247.439 kb on - strandat 247.439 kb on - strandat 247.449 kb on - strandat 247.452 kb on + strandat 247.452 kb on + strandat 247.517 kb on + strandat 247.517 kb on + strandat 247.538 kb on + strandat 247.651 kb on + strand, within BACOVA_02792at 247.695 kb on - strand, within BACOVA_02792at 247.783 kb on + strand, within BACOVA_02792at 247.785 kb on + strand, within BACOVA_02792at 247.785 kb on + strand, within BACOVA_02792at 247.786 kb on - strand, within BACOVA_02792at 247.828 kb on - strand, within BACOVA_02792at 247.828 kb on - strand, within BACOVA_02792at 247.829 kb on + strand, within BACOVA_02792at 247.830 kb on - strand, within BACOVA_02792at 247.830 kb on - strand, within BACOVA_02792

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Per-strain Table

Position Strand Gene LocusTag Fraction GAM 1 x (C) complex media
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244,140 - BACOVA_02789 0.36 -0.1
244,199 + BACOVA_02789 0.41 -0.8
244,199 + BACOVA_02789 0.41 -0.7
244,200 - BACOVA_02789 0.41 -1.4
244,228 + BACOVA_02789 0.43 +0.1
244,237 - BACOVA_02789 0.44 -0.3
244,252 + BACOVA_02789 0.46 -0.7
244,253 - BACOVA_02789 0.46 -0.9
244,253 - BACOVA_02789 0.46 -0.4
244,271 + BACOVA_02789 0.47 -0.1
244,272 - BACOVA_02789 0.47 +0.5
244,328 + BACOVA_02789 0.52 -0.2
244,337 + BACOVA_02789 0.53 +0.4
244,413 + BACOVA_02789 0.60 +2.0
244,414 - BACOVA_02789 0.60 -0.5
244,449 - BACOVA_02789 0.63 +0.9
244,484 - BACOVA_02789 0.66 +0.7
244,512 + BACOVA_02789 0.69 -0.2
244,513 - BACOVA_02789 0.69 -0.3
244,516 + BACOVA_02789 0.69 +0.3
244,516 + BACOVA_02789 0.69 -1.4
244,516 + BACOVA_02789 0.69 +0.9
244,517 - BACOVA_02789 0.69 -0.3
244,529 + BACOVA_02789 0.70 +1.4
244,530 - BACOVA_02789 0.70 -0.4
244,538 - BACOVA_02789 0.71 +0.0
244,539 + BACOVA_02789 0.71 -2.0
244,540 - BACOVA_02789 0.71 +1.0
244,542 - BACOVA_02789 0.71 -0.3
244,724 + BACOVA_02789 0.87 +0.5
244,741 + BACOVA_02789 0.89 -0.1
244,741 + BACOVA_02789 0.89 +0.2
244,741 + BACOVA_02789 0.89 +0.4
244,742 - BACOVA_02789 0.89 -1.2
244,742 - BACOVA_02789 0.89 +0.1
244,867 - -0.9
244,873 + -0.2
244,895 - -1.1
244,900 + +0.9
244,901 - -0.8
244,901 - +0.5
244,930 + -1.0
244,948 - +0.2
244,956 + +1.0
244,990 + BACOVA_02790 0.22 +0.6
244,991 - BACOVA_02790 0.23 +0.6
244,991 - BACOVA_02790 0.23 -0.1
245,058 + BACOVA_02790 0.72 -0.4
245,074 + BACOVA_02790 0.83 +0.2
245,085 + +0.8
245,111 + -2.7
245,111 + -1.1
245,190 - -2.3
245,617 - BACOVA_02791 0.29 +1.2
246,855 + -0.7
246,855 + -0.1
246,855 + +0.9
246,856 - +1.9
246,856 - +0.8
246,856 - -0.8
246,860 - +0.0
246,933 - +1.3
246,933 - -0.6
246,958 + -0.9
246,958 + -0.5
246,976 + -0.2
246,989 + -0.1
246,999 + -1.1
247,000 - +0.4
247,000 - -1.4
247,045 + +0.5
247,045 + -0.0
247,055 + +0.7
247,068 + -0.3
247,069 - -0.1
247,069 - -0.4
247,069 - +1.1
247,071 - +0.0
247,071 - -0.1
247,102 + -0.6
247,122 + -0.8
247,123 - -0.2
247,141 - +0.5
247,151 - -1.4
247,154 - +0.9
247,174 - +1.5
247,190 + -1.6
247,204 + +0.1
247,205 - +0.9
247,212 + -0.6
247,212 + -0.7
247,213 - +0.7
247,213 - -0.5
247,213 - -0.9
247,213 - +0.3
247,233 + -1.1
247,233 + -0.3
247,276 - +0.3
247,323 + -0.9
247,351 + +0.4
247,370 + +0.7
247,371 - +0.1
247,376 + +0.0
247,397 + +0.5
247,439 - +0.3
247,439 - +0.5
247,449 - +0.5
247,452 + -1.5
247,452 + -1.3
247,517 + -0.4
247,517 + -1.3
247,538 + +0.8
247,651 + BACOVA_02792 0.11 +0.4
247,695 - BACOVA_02792 0.20 -0.7
247,783 + BACOVA_02792 0.39 +1.2
247,785 + BACOVA_02792 0.40 +0.8
247,785 + BACOVA_02792 0.40 -1.7
247,786 - BACOVA_02792 0.40 -1.7
247,828 - BACOVA_02792 0.49 +0.5
247,828 - BACOVA_02792 0.49 -1.3
247,829 + BACOVA_02792 0.49 -0.3
247,830 - BACOVA_02792 0.50 -0.6
247,830 - BACOVA_02792 0.50 -1.3

Or see this region's nucleotide sequence