Experiment: marine_broth_2216 1 x (C) complex media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02572 and BACOVA_02573 are separated by 282 nucleotides BACOVA_02573 and BACOVA_02574 are separated by 13 nucleotides BACOVA_02574 and BACOVA_02575 are separated by 226 nucleotides BACOVA_02575 and BACOVA_02576 are separated by 35 nucleotides BACOVA_02576 and BACOVA_02577 are separated by 143 nucleotides
BACOVA_02572: BACOVA_02572 - methyltransferase domain protein, at 340,989 to 341,699
_02572
BACOVA_02573: BACOVA_02573 - hypothetical protein, at 341,982 to 342,491
_02573
BACOVA_02574: BACOVA_02574 - hypothetical protein, at 342,505 to 342,801
_02574
BACOVA_02575: BACOVA_02575 - tRNA-Pro, at 343,028 to 343,102
_02575
BACOVA_02576: BACOVA_02576 - tRNA-Pro, at 343,138 to 343,212
_02576
BACOVA_02577: BACOVA_02577 - hypothetical protein, at 343,356 to 343,523
_02577
Position (kb) 341
342
343 Strain fitness (log2 ratio) -2
-1
0
1
2 at 340.985 kb on + strand at 341.021 kb on + strand at 341.185 kb on + strand, within BACOVA_02572 at 341.186 kb on - strand, within BACOVA_02572 at 341.197 kb on + strand, within BACOVA_02572 at 341.261 kb on - strand, within BACOVA_02572 at 341.283 kb on - strand, within BACOVA_02572 at 341.314 kb on + strand, within BACOVA_02572 at 341.315 kb on - strand, within BACOVA_02572 at 341.324 kb on + strand, within BACOVA_02572 at 341.335 kb on - strand, within BACOVA_02572 at 341.500 kb on + strand, within BACOVA_02572 at 341.507 kb on + strand, within BACOVA_02572 at 341.508 kb on - strand, within BACOVA_02572 at 341.510 kb on - strand, within BACOVA_02572 at 341.518 kb on + strand, within BACOVA_02572 at 341.542 kb on + strand, within BACOVA_02572 at 341.543 kb on - strand, within BACOVA_02572 at 341.615 kb on - strand, within BACOVA_02572 at 341.649 kb on + strand at 341.649 kb on + strand at 341.649 kb on + strand at 341.652 kb on - strand at 341.661 kb on + strand at 341.662 kb on - strand at 341.662 kb on - strand at 341.683 kb on - strand at 341.686 kb on - strand at 341.736 kb on - strand at 341.767 kb on - strand at 341.767 kb on - strand at 341.768 kb on + strand at 341.832 kb on - strand at 341.839 kb on - strand at 341.961 kb on + strand at 341.961 kb on + strand at 341.962 kb on - strand at 341.962 kb on - strand at 341.962 kb on - strand at 341.966 kb on - strand at 341.967 kb on + strand at 341.994 kb on + strand at 341.995 kb on - strand at 342.064 kb on + strand, within BACOVA_02573 at 342.068 kb on + strand, within BACOVA_02573 at 342.073 kb on - strand, within BACOVA_02573 at 342.084 kb on - strand, within BACOVA_02573 at 342.105 kb on + strand, within BACOVA_02573 at 342.117 kb on - strand, within BACOVA_02573 at 342.124 kb on + strand, within BACOVA_02573 at 342.126 kb on + strand, within BACOVA_02573 at 342.127 kb on - strand, within BACOVA_02573 at 342.132 kb on + strand, within BACOVA_02573 at 342.133 kb on - strand, within BACOVA_02573 at 342.143 kb on + strand, within BACOVA_02573 at 342.144 kb on - strand, within BACOVA_02573 at 342.145 kb on + strand, within BACOVA_02573 at 342.145 kb on + strand, within BACOVA_02573 at 342.145 kb on + strand, within BACOVA_02573 at 342.190 kb on - strand, within BACOVA_02573 at 342.191 kb on + strand, within BACOVA_02573 at 342.191 kb on + strand, within BACOVA_02573 at 342.230 kb on - strand, within BACOVA_02573 at 342.230 kb on - strand, within BACOVA_02573 at 342.230 kb on - strand, within BACOVA_02573 at 342.233 kb on + strand, within BACOVA_02573 at 342.234 kb on - strand, within BACOVA_02573 at 342.292 kb on + strand, within BACOVA_02573 at 342.293 kb on - strand, within BACOVA_02573 at 342.335 kb on + strand, within BACOVA_02573 at 342.336 kb on - strand, within BACOVA_02573 at 342.344 kb on - strand, within BACOVA_02573 at 342.355 kb on - strand, within BACOVA_02573 at 342.355 kb on - strand, within BACOVA_02573 at 342.367 kb on - strand, within BACOVA_02573 at 342.389 kb on + strand, within BACOVA_02573 at 342.390 kb on - strand, within BACOVA_02573 at 342.414 kb on + strand, within BACOVA_02573 at 342.417 kb on - strand, within BACOVA_02573 at 342.419 kb on - strand, within BACOVA_02573 at 342.419 kb on - strand, within BACOVA_02573 at 342.450 kb on + strand at 342.456 kb on + strand at 342.489 kb on - strand at 342.491 kb on + strand at 342.492 kb on - strand at 342.537 kb on - strand, within BACOVA_02574 at 342.539 kb on + strand, within BACOVA_02574 at 342.548 kb on - strand, within BACOVA_02574 at 342.572 kb on - strand, within BACOVA_02574 at 342.625 kb on - strand, within BACOVA_02574 at 342.678 kb on - strand, within BACOVA_02574 at 342.730 kb on - strand, within BACOVA_02574 at 342.730 kb on - strand, within BACOVA_02574 at 342.772 kb on + strand at 342.784 kb on - strand at 342.849 kb on + strand at 342.877 kb on + strand at 342.877 kb on + strand at 342.877 kb on + strand at 342.884 kb on - strand at 342.884 kb on - strand at 342.924 kb on - strand at 342.948 kb on - strand at 342.954 kb on - strand at 342.959 kb on - strand at 342.962 kb on + strand at 342.963 kb on - strand at 342.980 kb on - strand at 342.982 kb on + strand at 342.988 kb on + strand at 342.989 kb on - strand at 342.989 kb on - strand at 343.118 kb on - strand at 343.120 kb on + strand at 343.120 kb on + strand at 343.439 kb on + strand, within BACOVA_02577
Per-strain Table
Position Strand Gene LocusTag Fraction marine_broth_2216 1 x (C) complex media remove 340,985 + +0.2 341,021 + +0.4 341,185 + BACOVA_02572 0.28 -1.0 341,186 - BACOVA_02572 0.28 -0.1 341,197 + BACOVA_02572 0.29 -1.4 341,261 - BACOVA_02572 0.38 +0.1 341,283 - BACOVA_02572 0.41 +0.1 341,314 + BACOVA_02572 0.46 -0.2 341,315 - BACOVA_02572 0.46 -2.0 341,324 + BACOVA_02572 0.47 +0.3 341,335 - BACOVA_02572 0.49 +0.3 341,500 + BACOVA_02572 0.72 -1.7 341,507 + BACOVA_02572 0.73 -1.8 341,508 - BACOVA_02572 0.73 -1.0 341,510 - BACOVA_02572 0.73 +0.6 341,518 + BACOVA_02572 0.74 -0.4 341,542 + BACOVA_02572 0.78 +1.2 341,543 - BACOVA_02572 0.78 +1.4 341,615 - BACOVA_02572 0.88 +0.4 341,649 + -0.4 341,649 + +0.3 341,649 + -0.5 341,652 - -0.3 341,661 + +1.6 341,662 - -0.6 341,662 - +0.8 341,683 - +0.2 341,686 - -0.2 341,736 - -1.0 341,767 - +0.3 341,767 - -1.7 341,768 + -0.0 341,832 - +0.6 341,839 - +0.6 341,961 + -1.4 341,961 + -0.2 341,962 - +0.4 341,962 - -0.7 341,962 - +0.5 341,966 - +0.1 341,967 + +0.2 341,994 + +0.6 341,995 - +0.5 342,064 + BACOVA_02573 0.16 -0.4 342,068 + BACOVA_02573 0.17 +0.6 342,073 - BACOVA_02573 0.18 -0.2 342,084 - BACOVA_02573 0.20 +1.3 342,105 + BACOVA_02573 0.24 -0.3 342,117 - BACOVA_02573 0.26 -1.5 342,124 + BACOVA_02573 0.28 +0.6 342,126 + BACOVA_02573 0.28 +0.6 342,127 - BACOVA_02573 0.28 -1.6 342,132 + BACOVA_02573 0.29 -0.0 342,133 - BACOVA_02573 0.30 -2.0 342,143 + BACOVA_02573 0.32 -1.4 342,144 - BACOVA_02573 0.32 +0.6 342,145 + BACOVA_02573 0.32 -2.7 342,145 + BACOVA_02573 0.32 +0.0 342,145 + BACOVA_02573 0.32 +0.9 342,190 - BACOVA_02573 0.41 -0.9 342,191 + BACOVA_02573 0.41 -0.6 342,191 + BACOVA_02573 0.41 -2.3 342,230 - BACOVA_02573 0.49 -0.2 342,230 - BACOVA_02573 0.49 -0.5 342,230 - BACOVA_02573 0.49 +0.6 342,233 + BACOVA_02573 0.49 +0.0 342,234 - BACOVA_02573 0.49 -1.7 342,292 + BACOVA_02573 0.61 +0.3 342,293 - BACOVA_02573 0.61 +0.9 342,335 + BACOVA_02573 0.69 -2.4 342,336 - BACOVA_02573 0.69 -0.8 342,344 - BACOVA_02573 0.71 -0.4 342,355 - BACOVA_02573 0.73 +0.3 342,355 - BACOVA_02573 0.73 -1.0 342,367 - BACOVA_02573 0.75 -1.4 342,389 + BACOVA_02573 0.80 -1.3 342,390 - BACOVA_02573 0.80 +1.6 342,414 + BACOVA_02573 0.85 -0.2 342,417 - BACOVA_02573 0.85 -1.7 342,419 - BACOVA_02573 0.86 -0.8 342,419 - BACOVA_02573 0.86 +0.6 342,450 + -0.4 342,456 + +2.6 342,489 - -0.7 342,491 + +0.2 342,492 - -1.0 342,537 - BACOVA_02574 0.11 +0.0 342,539 + BACOVA_02574 0.11 -0.7 342,548 - BACOVA_02574 0.14 -0.9 342,572 - BACOVA_02574 0.23 +1.2 342,625 - BACOVA_02574 0.40 -1.7 342,678 - BACOVA_02574 0.58 -1.4 342,730 - BACOVA_02574 0.76 +1.2 342,730 - BACOVA_02574 0.76 +0.1 342,772 + +0.0 342,784 - +0.8 342,849 + +1.2 342,877 + -2.3 342,877 + -0.4 342,877 + -1.2 342,884 - +1.2 342,884 - -0.1 342,924 - -1.1 342,948 - -0.6 342,954 - -1.1 342,959 - -0.1 342,962 + -1.6 342,963 - -2.7 342,980 - -1.7 342,982 + +0.4 342,988 + -0.4 342,989 - +0.9 342,989 - -0.4 343,118 - +0.5 343,120 + -0.7 343,120 + -0.4 343,439 + BACOVA_02577 0.49 -1.6
Or see this region's nucleotide sequence