Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00699

Experiment: marine_broth_2216 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00698 and BACOVA_00699 are separated by 82 nucleotidesBACOVA_00699 and BACOVA_00700 are separated by 231 nucleotides BACOVA_00698: BACOVA_00698 - arylsulfatase, at 62,017 to 63,579 _00698 BACOVA_00699: BACOVA_00699 - Creatinase, at 63,662 to 64,825 _00699 BACOVA_00700: BACOVA_00700 - glutamate dehydrogenase, NAD-specific, at 65,057 to 66,394 _00700 Position (kb) 63 64 65Strain fitness (log2 ratio) -2 -1 0 1 2at 62.665 kb on + strand, within BACOVA_00698at 62.666 kb on - strand, within BACOVA_00698at 62.666 kb on - strand, within BACOVA_00698at 62.738 kb on - strand, within BACOVA_00698at 62.738 kb on - strand, within BACOVA_00698at 62.818 kb on - strand, within BACOVA_00698at 62.866 kb on - strand, within BACOVA_00698at 62.985 kb on - strand, within BACOVA_00698at 63.014 kb on + strand, within BACOVA_00698at 63.015 kb on - strand, within BACOVA_00698at 63.041 kb on + strand, within BACOVA_00698at 63.041 kb on + strand, within BACOVA_00698at 63.041 kb on + strand, within BACOVA_00698at 63.041 kb on + strand, within BACOVA_00698at 63.043 kb on + strand, within BACOVA_00698at 63.043 kb on + strand, within BACOVA_00698at 63.076 kb on - strand, within BACOVA_00698at 63.076 kb on - strand, within BACOVA_00698at 63.080 kb on + strand, within BACOVA_00698at 63.080 kb on + strand, within BACOVA_00698at 63.081 kb on - strand, within BACOVA_00698at 63.087 kb on - strand, within BACOVA_00698at 63.227 kb on + strand, within BACOVA_00698at 63.228 kb on - strand, within BACOVA_00698at 63.228 kb on - strand, within BACOVA_00698at 63.318 kb on - strand, within BACOVA_00698at 63.459 kb on - strandat 63.462 kb on + strandat 63.463 kb on - strandat 63.516 kb on + strandat 63.550 kb on + strandat 63.550 kb on + strandat 63.550 kb on + strandat 63.551 kb on - strandat 63.551 kb on - strandat 63.559 kb on + strandat 63.593 kb on + strandat 63.605 kb on + strandat 63.605 kb on + strandat 63.606 kb on - strandat 63.606 kb on - strandat 63.606 kb on - strandat 63.608 kb on + strandat 63.608 kb on + strandat 63.609 kb on - strandat 63.756 kb on - strandat 63.796 kb on + strand, within BACOVA_00699at 63.807 kb on - strand, within BACOVA_00699at 63.847 kb on + strand, within BACOVA_00699at 63.874 kb on + strand, within BACOVA_00699at 64.075 kb on + strand, within BACOVA_00699at 64.075 kb on + strand, within BACOVA_00699at 64.076 kb on - strand, within BACOVA_00699at 64.106 kb on + strand, within BACOVA_00699at 64.106 kb on + strand, within BACOVA_00699at 64.148 kb on - strand, within BACOVA_00699at 64.204 kb on - strand, within BACOVA_00699at 64.254 kb on - strand, within BACOVA_00699at 64.359 kb on + strand, within BACOVA_00699at 64.380 kb on + strand, within BACOVA_00699at 64.380 kb on + strand, within BACOVA_00699at 64.381 kb on - strand, within BACOVA_00699at 64.381 kb on - strand, within BACOVA_00699at 64.426 kb on - strand, within BACOVA_00699at 64.475 kb on + strand, within BACOVA_00699at 64.516 kb on - strand, within BACOVA_00699at 64.523 kb on - strand, within BACOVA_00699at 64.525 kb on - strand, within BACOVA_00699at 64.525 kb on - strand, within BACOVA_00699at 64.545 kb on - strand, within BACOVA_00699at 64.615 kb on + strand, within BACOVA_00699at 64.643 kb on - strand, within BACOVA_00699at 64.645 kb on + strand, within BACOVA_00699at 64.646 kb on - strand, within BACOVA_00699at 64.665 kb on - strand, within BACOVA_00699at 64.696 kb on - strand, within BACOVA_00699at 64.716 kb on + strandat 64.717 kb on - strandat 64.738 kb on + strandat 64.747 kb on + strandat 64.748 kb on - strandat 64.848 kb on + strandat 64.849 kb on - strandat 64.853 kb on - strandat 64.901 kb on + strandat 64.920 kb on + strandat 64.920 kb on + strandat 64.938 kb on - strandat 64.950 kb on - strandat 64.964 kb on + strandat 64.970 kb on + strandat 65.033 kb on + strandat 65.039 kb on + strandat 65.039 kb on + strandat 65.040 kb on - strandat 65.040 kb on - strandat 65.058 kb on + strandat 65.058 kb on + strandat 65.062 kb on + strandat 65.063 kb on - strandat 65.099 kb on - strandat 65.127 kb on + strandat 65.127 kb on + strandat 65.131 kb on + strandat 65.136 kb on + strandat 65.137 kb on - strandat 65.307 kb on + strand, within BACOVA_00700at 65.307 kb on + strand, within BACOVA_00700at 65.307 kb on + strand, within BACOVA_00700at 65.308 kb on - strand, within BACOVA_00700at 65.308 kb on - strand, within BACOVA_00700at 65.308 kb on - strand, within BACOVA_00700at 65.308 kb on - strand, within BACOVA_00700at 65.317 kb on + strand, within BACOVA_00700at 65.384 kb on + strand, within BACOVA_00700at 65.385 kb on - strand, within BACOVA_00700at 65.385 kb on - strand, within BACOVA_00700at 65.490 kb on - strand, within BACOVA_00700at 65.520 kb on + strand, within BACOVA_00700at 65.563 kb on + strand, within BACOVA_00700at 65.563 kb on + strand, within BACOVA_00700at 65.564 kb on - strand, within BACOVA_00700at 65.564 kb on - strand, within BACOVA_00700at 65.566 kb on - strand, within BACOVA_00700at 65.602 kb on - strand, within BACOVA_00700at 65.605 kb on + strand, within BACOVA_00700at 65.605 kb on + strand, within BACOVA_00700at 65.605 kb on + strand, within BACOVA_00700at 65.608 kb on - strand, within BACOVA_00700at 65.608 kb on - strand, within BACOVA_00700at 65.608 kb on - strand, within BACOVA_00700at 65.663 kb on - strand, within BACOVA_00700at 65.663 kb on - strand, within BACOVA_00700at 65.710 kb on + strand, within BACOVA_00700at 65.717 kb on + strand, within BACOVA_00700at 65.718 kb on - strand, within BACOVA_00700at 65.757 kb on + strand, within BACOVA_00700

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Per-strain Table

Position Strand Gene LocusTag Fraction marine_broth_2216 1 x (C) complex media
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62,665 + BACOVA_00698 0.41 -0.1
62,666 - BACOVA_00698 0.42 -0.5
62,666 - BACOVA_00698 0.42 -0.7
62,738 - BACOVA_00698 0.46 -1.4
62,738 - BACOVA_00698 0.46 -0.4
62,818 - BACOVA_00698 0.51 -1.8
62,866 - BACOVA_00698 0.54 +0.9
62,985 - BACOVA_00698 0.62 +0.9
63,014 + BACOVA_00698 0.64 +0.4
63,015 - BACOVA_00698 0.64 +0.9
63,041 + BACOVA_00698 0.66 -0.6
63,041 + BACOVA_00698 0.66 +1.4
63,041 + BACOVA_00698 0.66 +0.3
63,041 + BACOVA_00698 0.66 +0.1
63,043 + BACOVA_00698 0.66 -0.9
63,043 + BACOVA_00698 0.66 -0.9
63,076 - BACOVA_00698 0.68 +0.2
63,076 - BACOVA_00698 0.68 +0.8
63,080 + BACOVA_00698 0.68 +0.6
63,080 + BACOVA_00698 0.68 -0.7
63,081 - BACOVA_00698 0.68 +1.3
63,087 - BACOVA_00698 0.68 +1.8
63,227 + BACOVA_00698 0.77 -0.2
63,228 - BACOVA_00698 0.77 -0.5
63,228 - BACOVA_00698 0.77 -0.2
63,318 - BACOVA_00698 0.83 -0.1
63,459 - +0.5
63,462 + +0.9
63,463 - +0.8
63,516 + +1.1
63,550 + -0.1
63,550 + -0.8
63,550 + +0.9
63,551 - +0.9
63,551 - +0.5
63,559 + -1.5
63,593 + -1.1
63,605 + -1.5
63,605 + -0.7
63,606 - -0.2
63,606 - -1.2
63,606 - +0.8
63,608 + -0.1
63,608 + -0.1
63,609 - -0.8
63,756 - +0.9
63,796 + BACOVA_00699 0.12 +0.5
63,807 - BACOVA_00699 0.12 +1.7
63,847 + BACOVA_00699 0.16 +0.3
63,874 + BACOVA_00699 0.18 -1.1
64,075 + BACOVA_00699 0.35 +0.3
64,075 + BACOVA_00699 0.35 -0.9
64,076 - BACOVA_00699 0.36 +0.4
64,106 + BACOVA_00699 0.38 +1.9
64,106 + BACOVA_00699 0.38 +0.1
64,148 - BACOVA_00699 0.42 +1.3
64,204 - BACOVA_00699 0.47 +0.3
64,254 - BACOVA_00699 0.51 +0.5
64,359 + BACOVA_00699 0.60 -0.1
64,380 + BACOVA_00699 0.62 -1.1
64,380 + BACOVA_00699 0.62 +0.5
64,381 - BACOVA_00699 0.62 +1.4
64,381 - BACOVA_00699 0.62 -0.9
64,426 - BACOVA_00699 0.66 +1.3
64,475 + BACOVA_00699 0.70 +1.1
64,516 - BACOVA_00699 0.73 -1.4
64,523 - BACOVA_00699 0.74 +0.0
64,525 - BACOVA_00699 0.74 +0.5
64,525 - BACOVA_00699 0.74 +0.9
64,545 - BACOVA_00699 0.76 +0.3
64,615 + BACOVA_00699 0.82 +0.1
64,643 - BACOVA_00699 0.84 +0.4
64,645 + BACOVA_00699 0.84 +0.2
64,646 - BACOVA_00699 0.85 +0.5
64,665 - BACOVA_00699 0.86 +0.8
64,696 - BACOVA_00699 0.89 -1.2
64,716 + +0.8
64,717 - +1.5
64,738 + +0.6
64,747 + +1.1
64,748 - -0.6
64,848 + -0.9
64,849 - -0.5
64,853 - -1.1
64,901 + +1.3
64,920 + +1.4
64,920 + -0.3
64,938 - -0.5
64,950 - +0.7
64,964 + +0.7
64,970 + +0.3
65,033 + +1.5
65,039 + -0.2
65,039 + -0.3
65,040 - +0.6
65,040 - +0.2
65,058 + +0.6
65,058 + -0.2
65,062 + +0.1
65,063 - -1.4
65,099 - -1.4
65,127 + +0.2
65,127 + -0.2
65,131 + -0.9
65,136 + +0.6
65,137 - -0.9
65,307 + BACOVA_00700 0.19 -0.9
65,307 + BACOVA_00700 0.19 -1.2
65,307 + BACOVA_00700 0.19 -1.0
65,308 - BACOVA_00700 0.19 +0.5
65,308 - BACOVA_00700 0.19 +0.0
65,308 - BACOVA_00700 0.19 -0.7
65,308 - BACOVA_00700 0.19 -0.9
65,317 + BACOVA_00700 0.19 -0.3
65,384 + BACOVA_00700 0.24 +1.3
65,385 - BACOVA_00700 0.25 -0.1
65,385 - BACOVA_00700 0.25 -0.3
65,490 - BACOVA_00700 0.32 -0.7
65,520 + BACOVA_00700 0.35 +0.9
65,563 + BACOVA_00700 0.38 -0.4
65,563 + BACOVA_00700 0.38 -0.4
65,564 - BACOVA_00700 0.38 -0.4
65,564 - BACOVA_00700 0.38 -0.8
65,566 - BACOVA_00700 0.38 -1.0
65,602 - BACOVA_00700 0.41 -0.2
65,605 + BACOVA_00700 0.41 -0.7
65,605 + BACOVA_00700 0.41 -0.5
65,605 + BACOVA_00700 0.41 +0.3
65,608 - BACOVA_00700 0.41 +0.2
65,608 - BACOVA_00700 0.41 -1.9
65,608 - BACOVA_00700 0.41 -1.2
65,663 - BACOVA_00700 0.45 -0.4
65,663 - BACOVA_00700 0.45 +1.5
65,710 + BACOVA_00700 0.49 -0.4
65,717 + BACOVA_00700 0.49 +0.2
65,718 - BACOVA_00700 0.49 +0.3
65,757 + BACOVA_00700 0.52 -0.4

Or see this region's nucleotide sequence