Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03626

Experiment: LB 1 x (C) complex media

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03624 and BACOVA_03625 are separated by 173 nucleotidesBACOVA_03625 and BACOVA_03626 are separated by 211 nucleotidesBACOVA_03626 and BACOVA_03627 are separated by 59 nucleotides BACOVA_03624: BACOVA_03624 - hypothetical protein, at 431,810 to 432,970 _03624 BACOVA_03625: BACOVA_03625 - hypothetical protein, at 433,144 to 433,254 _03625 BACOVA_03626: BACOVA_03626 - hypothetical protein, at 433,466 to 434,911 _03626 BACOVA_03627: BACOVA_03627 - glycosyl hydrolase family 76, at 434,971 to 436,101 _03627 Position (kb) 433 434 435Strain fitness (log2 ratio) -2 -1 0 1 2at 432.493 kb on - strand, within BACOVA_03624at 432.493 kb on - strand, within BACOVA_03624at 432.500 kb on + strand, within BACOVA_03624at 432.501 kb on - strand, within BACOVA_03624at 432.501 kb on - strand, within BACOVA_03624at 432.501 kb on - strand, within BACOVA_03624at 432.501 kb on - strand, within BACOVA_03624at 432.507 kb on - strand, within BACOVA_03624at 432.593 kb on + strand, within BACOVA_03624at 432.671 kb on - strand, within BACOVA_03624at 432.686 kb on - strand, within BACOVA_03624at 432.686 kb on - strand, within BACOVA_03624at 432.723 kb on + strand, within BACOVA_03624at 432.724 kb on - strand, within BACOVA_03624at 432.730 kb on + strand, within BACOVA_03624at 432.730 kb on + strand, within BACOVA_03624at 432.811 kb on + strand, within BACOVA_03624at 432.819 kb on - strand, within BACOVA_03624at 432.819 kb on - strand, within BACOVA_03624at 432.819 kb on - strand, within BACOVA_03624at 432.932 kb on - strandat 432.934 kb on + strandat 432.962 kb on - strandat 432.971 kb on - strandat 432.971 kb on - strandat 432.975 kb on + strandat 432.975 kb on + strandat 432.975 kb on + strandat 432.975 kb on + strandat 432.975 kb on + strandat 432.976 kb on - strandat 432.976 kb on - strandat 433.003 kb on - strandat 433.003 kb on - strandat 433.011 kb on + strandat 433.011 kb on + strandat 433.012 kb on - strandat 433.012 kb on - strandat 433.016 kb on - strandat 433.029 kb on + strandat 433.034 kb on - strandat 433.084 kb on - strandat 433.186 kb on + strand, within BACOVA_03625at 433.186 kb on + strand, within BACOVA_03625at 433.187 kb on - strand, within BACOVA_03625at 433.187 kb on - strand, within BACOVA_03625at 433.187 kb on - strand, within BACOVA_03625at 433.206 kb on + strand, within BACOVA_03625at 433.228 kb on + strand, within BACOVA_03625at 433.229 kb on - strand, within BACOVA_03625at 433.258 kb on + strandat 433.426 kb on + strandat 433.459 kb on + strandat 433.459 kb on + strandat 433.460 kb on - strandat 433.467 kb on + strandat 433.477 kb on + strandat 433.478 kb on - strandat 433.515 kb on - strandat 433.538 kb on - strandat 433.624 kb on + strand, within BACOVA_03626at 433.691 kb on - strand, within BACOVA_03626at 433.694 kb on - strand, within BACOVA_03626at 433.768 kb on - strand, within BACOVA_03626at 433.774 kb on + strand, within BACOVA_03626at 433.774 kb on + strand, within BACOVA_03626at 433.775 kb on - strand, within BACOVA_03626at 433.787 kb on + strand, within BACOVA_03626at 433.813 kb on + strand, within BACOVA_03626at 433.842 kb on + strand, within BACOVA_03626at 433.842 kb on + strand, within BACOVA_03626at 433.884 kb on - strand, within BACOVA_03626at 433.932 kb on + strand, within BACOVA_03626at 433.947 kb on + strand, within BACOVA_03626at 433.993 kb on + strand, within BACOVA_03626at 433.993 kb on + strand, within BACOVA_03626at 433.993 kb on + strand, within BACOVA_03626at 433.994 kb on - strand, within BACOVA_03626at 433.997 kb on - strand, within BACOVA_03626at 434.061 kb on + strand, within BACOVA_03626at 434.066 kb on + strand, within BACOVA_03626at 434.157 kb on - strand, within BACOVA_03626at 434.157 kb on - strand, within BACOVA_03626at 434.188 kb on + strand, within BACOVA_03626at 434.209 kb on - strand, within BACOVA_03626at 434.309 kb on + strand, within BACOVA_03626at 434.310 kb on - strand, within BACOVA_03626at 434.312 kb on - strand, within BACOVA_03626at 434.343 kb on + strand, within BACOVA_03626at 434.357 kb on - strand, within BACOVA_03626at 434.559 kb on + strand, within BACOVA_03626at 434.560 kb on - strand, within BACOVA_03626at 434.567 kb on + strand, within BACOVA_03626at 434.567 kb on + strand, within BACOVA_03626at 434.568 kb on - strand, within BACOVA_03626at 434.614 kb on + strand, within BACOVA_03626at 434.627 kb on - strand, within BACOVA_03626at 434.653 kb on + strand, within BACOVA_03626at 434.653 kb on + strand, within BACOVA_03626at 434.653 kb on + strand, within BACOVA_03626at 434.654 kb on - strand, within BACOVA_03626at 434.811 kb on + strandat 434.847 kb on - strandat 434.857 kb on + strandat 434.858 kb on - strandat 434.904 kb on - strandat 434.904 kb on - strandat 434.914 kb on + strandat 434.914 kb on + strandat 434.973 kb on - strandat 435.022 kb on - strandat 435.059 kb on - strandat 435.147 kb on + strand, within BACOVA_03627at 435.148 kb on - strand, within BACOVA_03627at 435.172 kb on + strand, within BACOVA_03627at 435.322 kb on + strand, within BACOVA_03627at 435.360 kb on - strand, within BACOVA_03627at 435.394 kb on - strand, within BACOVA_03627at 435.405 kb on - strand, within BACOVA_03627at 435.450 kb on - strand, within BACOVA_03627at 435.479 kb on - strand, within BACOVA_03627at 435.540 kb on + strand, within BACOVA_03627at 435.540 kb on + strand, within BACOVA_03627at 435.609 kb on - strand, within BACOVA_03627at 435.614 kb on + strand, within BACOVA_03627at 435.614 kb on + strand, within BACOVA_03627at 435.614 kb on + strand, within BACOVA_03627at 435.615 kb on - strand, within BACOVA_03627at 435.615 kb on - strand, within BACOVA_03627at 435.668 kb on + strand, within BACOVA_03627at 435.702 kb on + strand, within BACOVA_03627at 435.713 kb on + strand, within BACOVA_03627at 435.714 kb on - strand, within BACOVA_03627at 435.782 kb on + strand, within BACOVA_03627at 435.782 kb on + strand, within BACOVA_03627at 435.851 kb on + strand, within BACOVA_03627at 435.851 kb on + strand, within BACOVA_03627at 435.852 kb on - strand, within BACOVA_03627

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Per-strain Table

Position Strand Gene LocusTag Fraction LB 1 x (C) complex media
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432,493 - BACOVA_03624 0.59 -0.1
432,493 - BACOVA_03624 0.59 -0.3
432,500 + BACOVA_03624 0.59 -0.4
432,501 - BACOVA_03624 0.60 -0.0
432,501 - BACOVA_03624 0.60 +0.1
432,501 - BACOVA_03624 0.60 -0.6
432,501 - BACOVA_03624 0.60 +0.0
432,507 - BACOVA_03624 0.60 -0.8
432,593 + BACOVA_03624 0.67 +0.6
432,671 - BACOVA_03624 0.74 -0.5
432,686 - BACOVA_03624 0.75 -0.3
432,686 - BACOVA_03624 0.75 +0.5
432,723 + BACOVA_03624 0.79 -0.0
432,724 - BACOVA_03624 0.79 +0.5
432,730 + BACOVA_03624 0.79 +0.6
432,730 + BACOVA_03624 0.79 +0.9
432,811 + BACOVA_03624 0.86 -0.2
432,819 - BACOVA_03624 0.87 -0.3
432,819 - BACOVA_03624 0.87 +0.8
432,819 - BACOVA_03624 0.87 -0.6
432,932 - +0.1
432,934 + +0.7
432,962 - -0.1
432,971 - +0.1
432,971 - -0.6
432,975 + +0.4
432,975 + -0.1
432,975 + -0.1
432,975 + +0.5
432,975 + -0.4
432,976 - +0.4
432,976 - -0.1
433,003 - +0.1
433,003 - +0.4
433,011 + -1.8
433,011 + +0.4
433,012 - +0.1
433,012 - -0.2
433,016 - +0.5
433,029 + -0.6
433,034 - +0.2
433,084 - +1.2
433,186 + BACOVA_03625 0.38 +1.3
433,186 + BACOVA_03625 0.38 -0.6
433,187 - BACOVA_03625 0.39 +0.1
433,187 - BACOVA_03625 0.39 -0.1
433,187 - BACOVA_03625 0.39 +0.9
433,206 + BACOVA_03625 0.56 +0.4
433,228 + BACOVA_03625 0.76 +0.2
433,229 - BACOVA_03625 0.77 +1.3
433,258 + +0.8
433,426 + +0.4
433,459 + +1.6
433,459 + +0.3
433,460 - +0.9
433,467 + -0.6
433,477 + -0.2
433,478 - -0.3
433,515 - +0.0
433,538 - -0.4
433,624 + BACOVA_03626 0.11 +0.2
433,691 - BACOVA_03626 0.16 -0.5
433,694 - BACOVA_03626 0.16 -0.7
433,768 - BACOVA_03626 0.21 -0.4
433,774 + BACOVA_03626 0.21 -1.1
433,774 + BACOVA_03626 0.21 -0.7
433,775 - BACOVA_03626 0.21 +0.3
433,787 + BACOVA_03626 0.22 -0.5
433,813 + BACOVA_03626 0.24 +0.3
433,842 + BACOVA_03626 0.26 -0.1
433,842 + BACOVA_03626 0.26 +0.8
433,884 - BACOVA_03626 0.29 +0.2
433,932 + BACOVA_03626 0.32 -0.1
433,947 + BACOVA_03626 0.33 -0.2
433,993 + BACOVA_03626 0.36 -1.2
433,993 + BACOVA_03626 0.36 -0.3
433,993 + BACOVA_03626 0.36 +0.5
433,994 - BACOVA_03626 0.37 -0.7
433,997 - BACOVA_03626 0.37 -2.4
434,061 + BACOVA_03626 0.41 -0.5
434,066 + BACOVA_03626 0.41 -0.5
434,157 - BACOVA_03626 0.48 -0.6
434,157 - BACOVA_03626 0.48 -0.2
434,188 + BACOVA_03626 0.50 +0.3
434,209 - BACOVA_03626 0.51 -0.0
434,309 + BACOVA_03626 0.58 -0.5
434,310 - BACOVA_03626 0.58 +0.0
434,312 - BACOVA_03626 0.59 -1.9
434,343 + BACOVA_03626 0.61 -1.7
434,357 - BACOVA_03626 0.62 +0.0
434,559 + BACOVA_03626 0.76 -0.1
434,560 - BACOVA_03626 0.76 -0.4
434,567 + BACOVA_03626 0.76 +0.4
434,567 + BACOVA_03626 0.76 -1.2
434,568 - BACOVA_03626 0.76 -0.1
434,614 + BACOVA_03626 0.79 -0.0
434,627 - BACOVA_03626 0.80 +0.6
434,653 + BACOVA_03626 0.82 -0.4
434,653 + BACOVA_03626 0.82 +0.9
434,653 + BACOVA_03626 0.82 +0.9
434,654 - BACOVA_03626 0.82 +0.2
434,811 + -0.7
434,847 - +0.2
434,857 + -0.2
434,858 - -0.6
434,904 - +0.3
434,904 - +0.9
434,914 + -1.0
434,914 + +0.3
434,973 - +1.9
435,022 - -0.4
435,059 - +0.6
435,147 + BACOVA_03627 0.16 -0.1
435,148 - BACOVA_03627 0.16 -0.0
435,172 + BACOVA_03627 0.18 -0.5
435,322 + BACOVA_03627 0.31 -0.7
435,360 - BACOVA_03627 0.34 -0.8
435,394 - BACOVA_03627 0.37 -0.9
435,405 - BACOVA_03627 0.38 -0.2
435,450 - BACOVA_03627 0.42 -0.4
435,479 - BACOVA_03627 0.45 +0.3
435,540 + BACOVA_03627 0.50 -0.2
435,540 + BACOVA_03627 0.50 -1.5
435,609 - BACOVA_03627 0.56 -1.0
435,614 + BACOVA_03627 0.57 +0.4
435,614 + BACOVA_03627 0.57 -2.1
435,614 + BACOVA_03627 0.57 -0.6
435,615 - BACOVA_03627 0.57 -1.4
435,615 - BACOVA_03627 0.57 +0.1
435,668 + BACOVA_03627 0.62 +1.4
435,702 + BACOVA_03627 0.65 +0.6
435,713 + BACOVA_03627 0.66 -0.8
435,714 - BACOVA_03627 0.66 +0.3
435,782 + BACOVA_03627 0.72 +0.0
435,782 + BACOVA_03627 0.72 -0.4
435,851 + BACOVA_03627 0.78 +0.2
435,851 + BACOVA_03627 0.78 +1.3
435,852 - BACOVA_03627 0.78 +0.2

Or see this region's nucleotide sequence