Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03428

Experiment: Arabinoxylan (Rye Flour) 0.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour) 0.5 mg/ml (C)
147,046	-		BACOVA_03427	0.50	-0.2
147,086	-		BACOVA_03427	0.52	-0.3
147,110	+		BACOVA_03427	0.53	-1.2
147,129	-		BACOVA_03427	0.54	-0.1
147,129	-		BACOVA_03427	0.54	-1.0
147,179	-		BACOVA_03427	0.57	-0.9
147,179	-		BACOVA_03427	0.57	-0.8
147,272	+		BACOVA_03427	0.62	-0.5
147,273	-		BACOVA_03427	0.62	-0.5
147,273	-		BACOVA_03427	0.62	-0.3
147,285	-		BACOVA_03427	0.62	-1.3
147,327	+		BACOVA_03427	0.65	-0.7
147,328	-		BACOVA_03427	0.65	-0.8
147,368	+		BACOVA_03427	0.67	-1.7
147,369	-		BACOVA_03427	0.67	-1.0
147,381	-		BACOVA_03427	0.68	+0.1
147,439	+		BACOVA_03427	0.71	-0.9
147,439	+		BACOVA_03427	0.71	-1.2
147,439	+		BACOVA_03427	0.71	-0.6
147,440	-		BACOVA_03427	0.71	+0.3
147,448	+		BACOVA_03427	0.71	-0.5
147,448	+		BACOVA_03427	0.71	-0.5
147,497	+		BACOVA_03427	0.74	-1.8
147,533	+		BACOVA_03427	0.76	-0.1
147,533	+		BACOVA_03427	0.76	-0.2
147,561	+		BACOVA_03427	0.77	-2.1
147,562	-		BACOVA_03427	0.77	-0.5
147,567	-		BACOVA_03427	0.77	-1.3
147,583	+		BACOVA_03427	0.78	-1.6
147,619	+		BACOVA_03427	0.80	-1.5
147,620	-		BACOVA_03427	0.80	-2.1
147,679	+		BACOVA_03427	0.83	-1.9
147,679	+		BACOVA_03427	0.83	-0.7
147,789	-		BACOVA_03427	0.89	-1.6
147,789	-		BACOVA_03427	0.89	-1.7
147,790	+		BACOVA_03427	0.89	-1.2
147,836	+				+0.1
147,837	-				-1.5
147,837	-				-1.1
147,839	-				-1.2
147,907	+				-0.9
147,920	+				-0.9
147,951	-				-0.2
147,986	+				-0.5
148,000	+				-1.2
148,036	-				-0.5
148,039	+				-1.5
148,039	+				-1.7
148,040	-				-1.3
148,040	-				-2.0
148,041	+				-0.0
148,074	+				-0.9
148,074	+				-3.3
148,074	+				+0.5
148,119	-				-1.0
148,210	-				-0.3
148,216	-				-1.7
148,216	-				-0.2
148,216	-				+0.1
148,216	-				-1.7
148,290	-				-1.6
148,326	-		BACOVA_03428	0.11	+0.1
148,347	+		BACOVA_03428	0.12	-2.5
148,347	+		BACOVA_03428	0.12	-1.2
148,348	-		BACOVA_03428	0.12	-0.8
148,348	-		BACOVA_03428	0.12	-0.5
148,350	-		BACOVA_03428	0.12	-0.9
148,353	+		BACOVA_03428	0.12	+0.3
148,384	+		BACOVA_03428	0.13	-0.8
148,384	+		BACOVA_03428	0.13	-0.0
148,384	+		BACOVA_03428	0.13	+1.1
148,385	-		BACOVA_03428	0.13	-3.3
148,385	-		BACOVA_03428	0.13	-0.0
148,385	-		BACOVA_03428	0.13	-0.6
148,417	-		BACOVA_03428	0.14	+0.0
148,417	-		BACOVA_03428	0.14	-0.8
148,422	+		BACOVA_03428	0.14	-1.7
148,472	+		BACOVA_03428	0.16	-1.2
148,473	-		BACOVA_03428	0.16	-1.5
148,496	-		BACOVA_03428	0.17	-0.9
148,501	-		BACOVA_03428	0.17	+1.4
148,522	+		BACOVA_03428	0.18	-1.5
148,523	-		BACOVA_03428	0.18	-1.1
148,523	-		BACOVA_03428	0.18	-1.8
148,524	+		BACOVA_03428	0.18	-1.5
148,524	+		BACOVA_03428	0.18	-0.7
148,525	-		BACOVA_03428	0.18	-1.5
148,534	+		BACOVA_03428	0.18	-1.8
148,560	+		BACOVA_03428	0.19	-0.6
148,561	-		BACOVA_03428	0.19	-0.3
148,561	-		BACOVA_03428	0.19	-1.4
148,561	-		BACOVA_03428	0.19	-0.2
148,574	-		BACOVA_03428	0.20	-0.6
148,592	-		BACOVA_03428	0.20	-0.9
148,592	-		BACOVA_03428	0.20	-0.3
148,608	+		BACOVA_03428	0.21	-0.6
148,609	-		BACOVA_03428	0.21	-1.4
148,618	+		BACOVA_03428	0.21	-0.9
148,645	-		BACOVA_03428	0.22	-0.7
148,700	-		BACOVA_03428	0.24	+1.1
148,727	-		BACOVA_03428	0.25	-0.7
148,741	-		BACOVA_03428	0.26	-0.2
148,748	-		BACOVA_03428	0.26	-2.0
148,752	+		BACOVA_03428	0.26	-2.2
148,755	+		BACOVA_03428	0.26	-2.6
148,755	+		BACOVA_03428	0.26	-1.7
148,755	+		BACOVA_03428	0.26	-1.4
148,795	-		BACOVA_03428	0.27	-2.3
148,803	+		BACOVA_03428	0.28	-0.9
148,854	+		BACOVA_03428	0.30	-0.5
148,855	-		BACOVA_03428	0.30	-2.0
148,857	+		BACOVA_03428	0.30	-0.9
148,858	-		BACOVA_03428	0.30	-1.7
148,867	-		BACOVA_03428	0.30	-1.1
148,867	-		BACOVA_03428	0.30	-1.3
148,870	-		BACOVA_03428	0.30	-0.7
148,870	-		BACOVA_03428	0.30	-1.0
148,886	-		BACOVA_03428	0.31	-1.0
148,886	-		BACOVA_03428	0.31	-0.5
148,949	+		BACOVA_03428	0.33	-0.6
148,949	+		BACOVA_03428	0.33	-1.9
148,949	+		BACOVA_03428	0.33	-2.0
148,984	+		BACOVA_03428	0.34	-1.2
148,984	+		BACOVA_03428	0.34	-0.6
148,984	-		BACOVA_03428	0.34	-2.5
148,985	-		BACOVA_03428	0.34	-2.1
148,986	+		BACOVA_03428	0.34	-2.9
148,987	-		BACOVA_03428	0.34	-1.1
148,988	+		BACOVA_03428	0.34	-1.0
148,997	-		BACOVA_03428	0.35	-0.6
148,997	-		BACOVA_03428	0.35	-3.5
148,998	+		BACOVA_03428	0.35	-1.0
148,998	+		BACOVA_03428	0.35	-0.7
148,998	+		BACOVA_03428	0.35	-1.6
149,000	+		BACOVA_03428	0.35	-1.1
149,001	-		BACOVA_03428	0.35	-0.3
149,001	-		BACOVA_03428	0.35	-1.0
149,001	-		BACOVA_03428	0.35	-0.3
149,001	-		BACOVA_03428	0.35	+0.7
149,004	+		BACOVA_03428	0.35	-1.7
149,020	-		BACOVA_03428	0.35	-1.5
149,029	-		BACOVA_03428	0.36	-0.7
149,029	-		BACOVA_03428	0.36	+0.1
149,033	-		BACOVA_03428	0.36	-1.3
149,047	-		BACOVA_03428	0.36	+0.1
149,097	+		BACOVA_03428	0.38	-0.6
149,098	-		BACOVA_03428	0.38	-1.4
149,098	-		BACOVA_03428	0.38	-0.3
149,115	+		BACOVA_03428	0.39	-0.1
149,116	-		BACOVA_03428	0.39	+1.2
149,196	-		BACOVA_03428	0.42	-0.7
149,200	+		BACOVA_03428	0.42	+0.5
149,200	+		BACOVA_03428	0.42	-2.6
149,241	+		BACOVA_03428	0.43	-0.5
149,242	-		BACOVA_03428	0.43	-1.1
149,242	-		BACOVA_03428	0.43	-0.7
149,242	-		BACOVA_03428	0.43	-0.3
149,254	-		BACOVA_03428	0.44	-0.7
149,262	+		BACOVA_03428	0.44	-3.4
149,286	+		BACOVA_03428	0.45	+0.0
149,314	-		BACOVA_03428	0.46	-2.8
149,332	+		BACOVA_03428	0.46	-1.1
149,332	+		BACOVA_03428	0.46	-1.2
149,386	+		BACOVA_03428	0.48	-2.4
149,388	+		BACOVA_03428	0.48	-1.0
149,389	-		BACOVA_03428	0.49	-0.4
149,401	-		BACOVA_03428	0.49	+0.1
149,412	+		BACOVA_03428	0.49	-1.2
149,413	-		BACOVA_03428	0.49	-2.2
149,417	+		BACOVA_03428	0.50	-1.1
149,417	+		BACOVA_03428	0.50	-0.3
149,488	+		BACOVA_03428	0.52	-0.5
149,497	-		BACOVA_03428	0.52	-0.2
149,530	+		BACOVA_03428	0.54	-1.2
149,530	+		BACOVA_03428	0.54	+0.1
149,548	+		BACOVA_03428	0.54	-2.2
149,551	+		BACOVA_03428	0.54	-2.6
149,563	-		BACOVA_03428	0.55	-1.7
149,649	+		BACOVA_03428	0.58	-1.4
149,649	+		BACOVA_03428	0.58	-1.3
149,650	-		BACOVA_03428	0.58	-2.8
149,673	-		BACOVA_03428	0.59	-0.5
149,673	-		BACOVA_03428	0.59	-1.0
149,708	-		BACOVA_03428	0.60	-1.2
149,744	-		BACOVA_03428	0.61	-1.2
149,747	-		BACOVA_03428	0.61	-0.7
149,749	-		BACOVA_03428	0.61	-1.9
149,749	-		BACOVA_03428	0.61	-2.0
149,752	+		BACOVA_03428	0.61	-0.9
149,795	-		BACOVA_03428	0.63	-4.0
149,886	+		BACOVA_03428	0.66	-1.6
149,889	-		BACOVA_03428	0.66	-1.8
149,900	+		BACOVA_03428	0.67	+0.0
149,933	-		BACOVA_03428	0.68	-1.2
149,977	-		BACOVA_03428	0.69	-2.0
149,984	-		BACOVA_03428	0.70	+0.1
150,131	+		BACOVA_03428	0.75	-1.3
150,151	-		BACOVA_03428	0.76	-0.5
150,178	+		BACOVA_03428	0.76	-0.7
150,178	+		BACOVA_03428	0.76	+0.4
150,214	+		BACOVA_03428	0.78	-0.7
150,215	-		BACOVA_03428	0.78	-1.7
150,310	+		BACOVA_03428	0.81	-2.2
150,311	-		BACOVA_03428	0.81	-1.9
150,312	+		BACOVA_03428	0.81	-1.0
150,312	+		BACOVA_03428	0.81	-1.6
150,381	+		BACOVA_03428	0.84	+0.9
150,394	-		BACOVA_03428	0.84	-2.5
150,421	+		BACOVA_03428	0.85	-1.0
150,433	-		BACOVA_03428	0.86	+0.6
150,433	-		BACOVA_03428	0.86	-0.5
150,483	+		BACOVA_03428	0.87	-0.8
150,507	+		BACOVA_03428	0.88	-1.3
150,567	+				-1.2
150,568	-				-3.4
150,572	-				+0.4
150,586	-				-2.6
150,600	+				-2.2
150,603	+				-1.9
150,604	-				+1.1
150,613	-				+0.1
150,619	-				-0.3
150,631	+				-0.6
150,631	+				-2.2
150,639	+				-2.1
150,669	+				-1.4
150,670	-				-2.4
150,673	+				-1.2
150,710	+				-1.5
150,728	-				-2.0
150,728	-				+2.1
150,728	-				-1.4
150,747	-				-1.0
150,750	+				-0.7
150,751	-				-2.8
150,755	+				-2.1
150,773	-				-1.3
150,858	-				-1.3
150,860	+				+1.1
150,861	-				-1.4
150,864	+				-2.9
150,864	+				+0.1
150,864	+				-0.9
150,864	+				-0.2
150,865	-				-1.9
150,893	+				-1.5
150,973	+				-0.5
150,974	-				-0.9
150,988	+				-0.8
151,015	+				+1.1
151,036	+				+0.4
151,036	+				-2.1
151,036	+				-1.3
151,037	-				-3.9
151,037	-				-1.8
151,037	-				-1.5
151,051	+		BACOVA_03429	0.10	-2.2
151,140	+		BACOVA_03429	0.15	-0.9
151,141	-		BACOVA_03429	0.15	+0.1
151,177	+		BACOVA_03429	0.17	-0.4
151,177	+		BACOVA_03429	0.17	-1.1
151,178	-		BACOVA_03429	0.17	-1.5
151,211	+		BACOVA_03429	0.19	-1.0
151,212	-		BACOVA_03429	0.19	-0.8
151,296	-		BACOVA_03429	0.24	-2.1
151,300	+		BACOVA_03429	0.24	+0.1
151,301	-		BACOVA_03429	0.24	-0.6
151,369	+		BACOVA_03429	0.28	-0.2
151,370	-		BACOVA_03429	0.28	+0.7
151,433	+		BACOVA_03429	0.32	+0.1
151,433	+		BACOVA_03429	0.32	-1.2
151,435	+		BACOVA_03429	0.32	-0.1
151,435	+		BACOVA_03429	0.32	-2.2
151,436	-		BACOVA_03429	0.32	-1.5
151,436	-		BACOVA_03429	0.32	-1.6
151,436	-		BACOVA_03429	0.32	-1.6
151,436	-		BACOVA_03429	0.32	-1.1
151,438	-		BACOVA_03429	0.32	-0.9
151,479	+		BACOVA_03429	0.34	-2.3
151,480	-		BACOVA_03429	0.34	-1.9
151,519	-		BACOVA_03429	0.37	-0.7
151,538	-		BACOVA_03429	0.38	-0.4
151,538	-		BACOVA_03429	0.38	-1.4
151,538	-		BACOVA_03429	0.38	-1.9
151,609	-		BACOVA_03429	0.42	-0.7
151,609	-		BACOVA_03429	0.42	-2.3
151,609	-		BACOVA_03429	0.42	-1.5
151,650	+		BACOVA_03429	0.44	-0.9
151,678	-		BACOVA_03429	0.46	-1.3
151,744	+		BACOVA_03429	0.49	-2.5
151,822	-		BACOVA_03429	0.54	-0.9
151,822	-		BACOVA_03429	0.54	-2.9