Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03424

Experiment: Arabinoxylan (Rye Flour) 0.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour) 0.5 mg/ml (C)
138,607	+		BACOVA_03423	0.54	+3.0
138,618	-		BACOVA_03423	0.55	-2.7
138,618	-		BACOVA_03423	0.55	-0.9
138,636	-		BACOVA_03423	0.55	+1.1
138,675	+		BACOVA_03423	0.57	+2.5
138,678	-		BACOVA_03423	0.58	-0.8
138,691	-		BACOVA_03423	0.58	-0.5
138,723	-		BACOVA_03423	0.60	-0.2
138,749	+		BACOVA_03423	0.61	+2.0
138,750	-		BACOVA_03423	0.61	+0.0
138,750	-		BACOVA_03423	0.61	-1.2
138,828	-		BACOVA_03423	0.65	+1.4
138,838	-		BACOVA_03423	0.66	-0.3
138,868	-		BACOVA_03423	0.67	+0.4
138,878	-		BACOVA_03423	0.68	-1.3
138,896	+		BACOVA_03423	0.68	+1.9
138,896	+		BACOVA_03423	0.68	+2.8
138,920	+		BACOVA_03423	0.70	+3.2
138,921	-		BACOVA_03423	0.70	-0.7
138,921	-		BACOVA_03423	0.70	-1.0
138,921	-		BACOVA_03423	0.70	-1.3
138,924	+		BACOVA_03423	0.70	+2.0
138,925	-		BACOVA_03423	0.70	-2.2
138,929	+		BACOVA_03423	0.70	+1.9
138,930	-		BACOVA_03423	0.70	-1.3
138,953	-		BACOVA_03423	0.71	-0.3
139,047	-		BACOVA_03423	0.76	-1.1
139,081	-		BACOVA_03423	0.78	-0.7
139,083	+		BACOVA_03423	0.78	+3.2
139,134	+		BACOVA_03423	0.80	+1.2
139,265	-		BACOVA_03423	0.87	-0.9
139,289	+		BACOVA_03423	0.88	+2.4
139,293	+		BACOVA_03423	0.88	+1.4
139,293	+		BACOVA_03423	0.88	+2.5
139,294	-		BACOVA_03423	0.88	-0.5
139,298	+		BACOVA_03423	0.89	+2.0
139,332	-				-0.4
139,377	-				-0.8
139,414	+				+1.4
139,419	-				-1.9
139,427	+				+2.3
139,428	-				+0.7
139,428	-				-0.6
139,463	-				+0.1
139,490	+				+2.3
139,510	+				+3.9
139,513	+				+1.8
139,629	-				-1.1
139,664	+				+1.3
139,667	-				-0.2
139,668	+				+1.0
139,668	+				-0.6
139,668	+				+0.3
139,669	-				-1.6
139,669	-				-2.3
139,689	+		BACOVA_03424	0.11	+0.9
139,690	-		BACOVA_03424	0.11	-0.8
139,744	+		BACOVA_03424	0.15	+2.3
139,745	-		BACOVA_03424	0.15	-0.1
139,745	-		BACOVA_03424	0.15	+1.1
139,747	-		BACOVA_03424	0.15	-0.0
139,747	-		BACOVA_03424	0.15	-0.9
139,758	+		BACOVA_03424	0.16	+1.7
139,759	-		BACOVA_03424	0.16	-0.1
139,825	-		BACOVA_03424	0.21	-1.3
139,870	+		BACOVA_03424	0.24	+1.5
139,870	+		BACOVA_03424	0.24	+1.5
139,877	-		BACOVA_03424	0.25	+1.7
139,877	-		BACOVA_03424	0.25	-0.0
139,953	+		BACOVA_03424	0.31	+0.3
140,004	-		BACOVA_03424	0.34	-1.1
140,004	-		BACOVA_03424	0.34	-0.2
140,027	+		BACOVA_03424	0.36	+1.4
140,030	-		BACOVA_03424	0.36	+0.1
140,030	-		BACOVA_03424	0.36	+0.3
140,030	-		BACOVA_03424	0.36	-0.2
140,031	+		BACOVA_03424	0.36	+1.9
140,035	+		BACOVA_03424	0.37	+0.7
140,036	-		BACOVA_03424	0.37	-1.4
140,057	-		BACOVA_03424	0.38	-1.4
140,057	-		BACOVA_03424	0.38	-1.4
140,103	-		BACOVA_03424	0.42	+0.2
140,153	-		BACOVA_03424	0.46	-0.5
140,153	-		BACOVA_03424	0.46	-0.5
140,154	+		BACOVA_03424	0.46	+1.7
140,155	-		BACOVA_03424	0.46	-2.0
140,190	+		BACOVA_03424	0.48	+0.7
140,220	+		BACOVA_03424	0.51	+1.1
140,235	+		BACOVA_03424	0.52	+1.4
140,260	+		BACOVA_03424	0.54	+0.5
140,261	-		BACOVA_03424	0.54	-0.9
140,261	-		BACOVA_03424	0.54	-0.8
140,261	-		BACOVA_03424	0.54	-1.3
140,261	-		BACOVA_03424	0.54	+0.4
140,263	-		BACOVA_03424	0.54	-1.1
140,308	-		BACOVA_03424	0.57	-1.3
140,316	+		BACOVA_03424	0.58	+1.0
140,317	-		BACOVA_03424	0.58	-0.5
140,329	+		BACOVA_03424	0.59	+1.1
140,330	-		BACOVA_03424	0.59	-0.5
140,380	-		BACOVA_03424	0.63	+0.7
140,380	-		BACOVA_03424	0.63	+1.4
140,416	+		BACOVA_03424	0.65	+0.9
140,416	+		BACOVA_03424	0.65	+1.1
140,417	-		BACOVA_03424	0.65	-1.2
140,417	-		BACOVA_03424	0.65	-0.7
140,419	-		BACOVA_03424	0.66	-0.7
140,419	-		BACOVA_03424	0.66	-1.2
140,419	-		BACOVA_03424	0.66	+1.3
140,450	-		BACOVA_03424	0.68	+0.4
140,553	+		BACOVA_03424	0.76	+0.5
140,554	-		BACOVA_03424	0.76	+2.1
140,569	+		BACOVA_03424	0.77	+2.3
140,569	+		BACOVA_03424	0.77	+1.5
140,570	-		BACOVA_03424	0.77	+0.5
140,589	+		BACOVA_03424	0.78	+0.9
140,596	+		BACOVA_03424	0.79	-0.1
140,720	+		BACOVA_03424	0.88	+0.9
140,721	-		BACOVA_03424	0.88	-0.9
140,733	+		BACOVA_03424	0.89	+2.1
140,734	-		BACOVA_03424	0.89	-0.7
140,734	-		BACOVA_03424	0.89	-1.2
140,734	-		BACOVA_03424	0.89	-1.7
140,759	+				+0.0
140,759	+				+1.8
140,760	-				-1.4
140,761	+				+1.0
140,762	-				-1.1
140,762	-				-0.8
140,764	-				-1.8
140,802	-				-0.7
140,802	-				-1.2
140,903	+				-0.2
140,904	-				-1.8
141,002	-				-2.3
141,007	-				+1.7
141,010	+				-0.7
141,011	-				-4.4
141,036	+				+0.9
141,102	+				-1.0
141,102	+				-2.9
141,110	+				-0.9
141,113	+				-2.2
141,113	+				+0.7
141,120	-				-2.3
141,147	+				-0.4
141,147	+				-2.1
141,148	-				-2.4
141,168	-				-3.2
141,174	+				-1.5
141,175	-				+0.1
141,233	-		BACOVA_03425	0.12	-2.3
141,241	+		BACOVA_03425	0.12	-1.0
141,292	+		BACOVA_03425	0.15	-1.6
141,298	+		BACOVA_03425	0.15	-0.9
141,323	-		BACOVA_03425	0.17	+0.1
141,334	-		BACOVA_03425	0.17	-0.5
141,361	+		BACOVA_03425	0.19	-2.0
141,362	-		BACOVA_03425	0.19	-1.5
141,372	-		BACOVA_03425	0.19	-1.6
141,378	+		BACOVA_03425	0.20	-1.8
141,379	-		BACOVA_03425	0.20	-2.5
141,379	-		BACOVA_03425	0.20	-2.1
141,379	-		BACOVA_03425	0.20	-2.6
141,388	+		BACOVA_03425	0.20	-1.5
141,405	+		BACOVA_03425	0.21	-1.5
141,405	+		BACOVA_03425	0.21	-1.6
141,406	-		BACOVA_03425	0.21	-2.6
141,474	-		BACOVA_03425	0.25	-2.5
141,529	+		BACOVA_03425	0.28	-0.7
141,538	+		BACOVA_03425	0.28	-0.4
141,540	+		BACOVA_03425	0.29	-1.8
141,550	+		BACOVA_03425	0.29	-0.2
141,551	-		BACOVA_03425	0.29	-3.7
141,551	-		BACOVA_03425	0.29	-1.6
141,553	+		BACOVA_03425	0.29	+0.1
141,553	+		BACOVA_03425	0.29	-0.9
141,554	-		BACOVA_03425	0.29	-2.1
141,555	+		BACOVA_03425	0.29	-1.2
141,555	+		BACOVA_03425	0.29	-1.7
141,556	-		BACOVA_03425	0.29	-2.5
141,561	-		BACOVA_03425	0.30	-3.1
141,654	+		BACOVA_03425	0.35	-0.9
141,695	-		BACOVA_03425	0.37	-2.2
141,696	+		BACOVA_03425	0.37	-0.7
141,697	-		BACOVA_03425	0.37	-0.5
141,697	-		BACOVA_03425	0.37	-0.6
141,727	-		BACOVA_03425	0.39	-2.0
141,739	-		BACOVA_03425	0.40	-0.9
141,739	-		BACOVA_03425	0.40	-0.3
141,751	-		BACOVA_03425	0.40	-1.9
141,751	-		BACOVA_03425	0.40	-1.1
141,756	-		BACOVA_03425	0.41	-2.9
141,762	-		BACOVA_03425	0.41	-1.7
141,815	+		BACOVA_03425	0.44	-0.4
141,854	+		BACOVA_03425	0.46	-1.6
141,870	-		BACOVA_03425	0.47	-1.8
141,872	-		BACOVA_03425	0.47	-2.2