Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02611

Experiment: Arabinoxylan (Rye Flour) 0.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02610 and BACOVA_02611 are separated by 617 nucleotidesBACOVA_02611 and BACOVA_02612 are separated by 472 nucleotides BACOVA_02610: BACOVA_02610 - DNA polymerase III, delta subunit, at 379,705 to 380,724 _02610 BACOVA_02611: BACOVA_02611 - hypothetical protein, at 381,342 to 381,461 _02611 BACOVA_02612: BACOVA_02612 - DNA-binding helix-turn-helix protein, at 381,934 to 382,404 _02612 Position (kb) 381 382Strain fitness (log2 ratio) -1 0 1at 381.137 kb on - strandat 381.140 kb on - strandat 381.256 kb on - strandat 381.435 kb on - strand, within BACOVA_02611at 381.439 kb on - strand, within BACOVA_02611at 381.930 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Arabinoxylan (Rye Flour) 0.5 mg/ml (C)
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381,137 - -0.3
381,140 - -0.2
381,256 - -0.0
381,435 - BACOVA_02611 0.78 +0.6
381,439 - BACOVA_02611 0.81 -0.2
381,930 + +1.5

Or see this region's nucleotide sequence