Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04212

Experiment: Pectin from citrus peel; filtered 1 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; filtered 1 mg/ml (C)
89,589	-		BACOVA_04211	0.51	-0.9
89,658	-		BACOVA_04211	0.54	+0.8
89,736	-		BACOVA_04211	0.59	+0.3
89,755	+		BACOVA_04211	0.60	-0.7
89,804	+		BACOVA_04211	0.62	-0.3
89,811	-		BACOVA_04211	0.63	+0.9
89,814	+		BACOVA_04211	0.63	+0.1
89,814	+		BACOVA_04211	0.63	-0.1
89,822	+		BACOVA_04211	0.63	+0.5
89,845	+		BACOVA_04211	0.64	-1.1
89,846	-		BACOVA_04211	0.64	-0.5
89,883	-		BACOVA_04211	0.66	+0.4
89,919	+		BACOVA_04211	0.68	-0.8
89,952	+		BACOVA_04211	0.70	+0.0
89,990	-		BACOVA_04211	0.72	-0.3
90,122	+		BACOVA_04211	0.79	+0.2
90,148	-		BACOVA_04211	0.81	-0.2
90,276	-		BACOVA_04211	0.87	+1.6
90,327	+				+0.4
90,328	-				+0.6
90,330	+				-1.1
90,341	+				+0.2
90,341	+				+0.9
90,341	+				-1.1
90,342	-				-3.0
90,364	-				-1.0
90,370	+				+0.4
90,370	+				-0.3
90,370	+				-0.4
90,371	-				-1.1
90,376	-				-0.1
90,376	-				+0.6
90,403	+				+1.3
90,487	+				-1.5
90,487	+				+0.8
90,488	-				-0.3
90,497	+				+0.7
90,497	+				+0.4
90,529	+				-0.1
90,529	+				+0.3
90,540	-				+0.5
90,610	+		BACOVA_04212	0.12	-0.4
90,611	-		BACOVA_04212	0.12	+0.1
90,611	-		BACOVA_04212	0.12	-0.9
90,613	-		BACOVA_04212	0.13	-0.3
90,613	-		BACOVA_04212	0.13	-1.7
90,788	+		BACOVA_04212	0.34	-0.3
90,826	+		BACOVA_04212	0.39	+0.3
90,831	-		BACOVA_04212	0.40	+1.3
90,831	-		BACOVA_04212	0.40	-0.1
90,853	+		BACOVA_04212	0.43	-1.9
90,853	+		BACOVA_04212	0.43	+0.1
90,900	+		BACOVA_04212	0.48	-2.3
90,900	+		BACOVA_04212	0.48	+0.1
90,901	-		BACOVA_04212	0.49	-0.8
90,916	+		BACOVA_04212	0.50	+0.7
90,916	+		BACOVA_04212	0.50	+0.7
91,000	+		BACOVA_04212	0.61	-0.0
91,033	+		BACOVA_04212	0.65	+1.9
91,039	-		BACOVA_04212	0.66	+0.3
91,071	+		BACOVA_04212	0.70	-0.7
91,072	-		BACOVA_04212	0.70	+0.2
91,168	+		BACOVA_04212	0.82	+0.5
91,200	-		BACOVA_04212	0.86	-0.6
91,263	+				+0.8
91,263	+				+0.1
91,264	-				+1.0
91,264	-				+0.4
91,294	+				-0.7
91,294	+				-1.3
91,295	-				-0.9
91,295	-				-1.0
91,352	+				+0.2
91,356	+				+1.5
91,363	+				-0.1
91,390	+				-0.4
91,411	-				-1.4
91,428	+				+0.6
91,431	-				-1.5
91,452	+				-1.1
91,470	+				-0.3
91,473	-				-0.5
91,473	-				+0.2
91,473	-				-0.1
91,479	+				+0.6
91,480	-				-1.1
91,483	-				-1.4
91,540	+		BACOVA_04213	0.14	-0.8
91,540	+		BACOVA_04213	0.14	+1.3
91,629	+		BACOVA_04213	0.22	-0.2
91,646	+		BACOVA_04213	0.23	-1.2
91,647	-		BACOVA_04213	0.23	+1.3
91,647	-		BACOVA_04213	0.23	+1.3
91,649	+		BACOVA_04213	0.23	-0.6
91,686	+		BACOVA_04213	0.26	+0.6
91,696	-		BACOVA_04213	0.27	+0.5
91,696	-		BACOVA_04213	0.27	+0.7
91,699	+		BACOVA_04213	0.27	-0.3
91,699	+		BACOVA_04213	0.27	+0.1
91,746	+		BACOVA_04213	0.31	-0.5
91,779	+		BACOVA_04213	0.34	-0.7
91,839	-		BACOVA_04213	0.39	-0.0
91,877	+		BACOVA_04213	0.42	+2.9
91,877	+		BACOVA_04213	0.42	+0.5
91,877	+		BACOVA_04213	0.42	-0.4
91,878	-		BACOVA_04213	0.42	-0.7
91,878	-		BACOVA_04213	0.42	-1.3
91,878	-		BACOVA_04213	0.42	+0.7
91,922	-		BACOVA_04213	0.46	+0.8
91,922	-		BACOVA_04213	0.46	-0.3
91,939	-		BACOVA_04213	0.47	-0.9
91,997	+		BACOVA_04213	0.52	-0.1
92,013	+		BACOVA_04213	0.54	-0.7
92,013	+		BACOVA_04213	0.54	+1.0
92,045	-		BACOVA_04213	0.56	-0.5
92,048	+		BACOVA_04213	0.57	-1.4
92,070	+		BACOVA_04213	0.58	+0.2
92,071	-		BACOVA_04213	0.59	-2.6
92,088	+		BACOVA_04213	0.60	+1.2
92,089	-		BACOVA_04213	0.60	-0.7
92,130	+		BACOVA_04213	0.63	-1.6
92,131	-		BACOVA_04213	0.64	-0.3
92,143	+		BACOVA_04213	0.65	-1.2
92,181	-		BACOVA_04213	0.68	+1.6
92,231	-		BACOVA_04213	0.72	-1.4
92,297	+		BACOVA_04213	0.77	+0.2