Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04211

Experiment: Pectin from citrus peel; filtered 1 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; filtered 1 mg/ml (C)
87,643	+				+0.2
87,643	+				-0.3
87,643	+				-0.9
87,644	-				-0.2
87,644	-				+0.1
87,648	+				-0.2
87,648	+				+0.4
87,689	+				+0.6
87,700	+				-0.7
87,819	+		BACOVA_04210	0.22	-0.8
87,820	-		BACOVA_04210	0.22	+1.4
87,825	+		BACOVA_04210	0.23	-0.6
87,842	-		BACOVA_04210	0.25	-0.1
87,880	+		BACOVA_04210	0.30	-1.2
87,880	+		BACOVA_04210	0.30	-0.3
87,880	+		BACOVA_04210	0.30	+0.5
87,881	-		BACOVA_04210	0.30	-0.5
87,881	-		BACOVA_04210	0.30	+1.1
87,973	+		BACOVA_04210	0.42	+0.3
87,973	+		BACOVA_04210	0.42	-1.1
87,974	-		BACOVA_04210	0.42	-0.0
87,974	-		BACOVA_04210	0.42	-1.7
87,976	-		BACOVA_04210	0.42	-0.4
88,043	-		BACOVA_04210	0.51	-0.7
88,043	-		BACOVA_04210	0.51	-1.6
88,043	-		BACOVA_04210	0.51	-1.4
88,045	-		BACOVA_04210	0.51	+0.3
88,048	-		BACOVA_04210	0.51	+0.1
88,092	-		BACOVA_04210	0.57	-0.1
88,092	-		BACOVA_04210	0.57	-0.7
88,126	+		BACOVA_04210	0.61	-0.1
88,127	-		BACOVA_04210	0.61	-0.8
88,159	+		BACOVA_04210	0.65	+0.4
88,159	+		BACOVA_04210	0.65	-0.6
88,159	+		BACOVA_04210	0.65	-1.3
88,159	+		BACOVA_04210	0.65	+1.3
88,160	-		BACOVA_04210	0.66	+0.7
88,270	+		BACOVA_04210	0.80	+0.8
88,270	+		BACOVA_04210	0.80	+0.4
88,278	+		BACOVA_04210	0.81	-0.3
88,278	+		BACOVA_04210	0.81	-0.5
88,467	+				-0.8
88,475	+				+1.9
88,489	+				+1.2
88,490	-				+0.1
88,490	-				+0.2
88,494	+				-0.1
88,495	-				+0.9
88,495	-				-0.2
88,496	+				-0.9
88,496	+				-0.6
88,510	-				-0.7
88,512	-				+1.4
88,512	-				-2.4
88,515	-				+0.1
88,515	-				+0.1
88,521	-				-0.3
88,540	+				+0.9
88,540	+				+0.4
88,540	+				-0.3
88,544	-				-0.6
88,549	-				-0.9
88,549	-				-0.0
88,550	+				+1.4
88,550	+				-0.8
88,551	-				-1.6
88,551	-				-0.3
88,599	-				+0.9
88,629	-				+2.9
88,629	-				+0.9
88,629	-				+1.1
88,629	-				-1.0
88,630	+				+1.1
88,631	-				-0.3
88,695	+				-0.7
88,695	+				-0.6
88,855	-		BACOVA_04211	0.11	+0.2
88,944	+		BACOVA_04211	0.16	-0.9
88,956	+		BACOVA_04211	0.17	-0.7
88,959	-		BACOVA_04211	0.17	+2.5
88,981	-		BACOVA_04211	0.18	-0.5
89,015	-		BACOVA_04211	0.20	-0.1
89,017	+		BACOVA_04211	0.20	+0.9
89,018	-		BACOVA_04211	0.20	+0.4
89,033	+		BACOVA_04211	0.21	+1.9
89,110	-		BACOVA_04211	0.25	-0.4
89,155	-		BACOVA_04211	0.27	-0.9
89,169	+		BACOVA_04211	0.28	+1.5
89,169	+		BACOVA_04211	0.28	-1.7
89,170	-		BACOVA_04211	0.28	+0.3
89,178	-		BACOVA_04211	0.29	-1.0
89,208	+		BACOVA_04211	0.30	+1.0
89,210	+		BACOVA_04211	0.30	-0.7
89,216	+		BACOVA_04211	0.31	-0.4
89,216	+		BACOVA_04211	0.31	-0.1
89,216	+		BACOVA_04211	0.31	+0.2
89,216	+		BACOVA_04211	0.31	-0.8
89,217	-		BACOVA_04211	0.31	+0.9
89,217	-		BACOVA_04211	0.31	+0.5
89,217	-		BACOVA_04211	0.31	+0.5
89,217	-		BACOVA_04211	0.31	+0.1
89,217	-		BACOVA_04211	0.31	-0.5
89,217	-		BACOVA_04211	0.31	+0.5
89,217	-		BACOVA_04211	0.31	+0.0
89,217	-		BACOVA_04211	0.31	+0.1
89,217	-		BACOVA_04211	0.31	+0.7
89,217	-		BACOVA_04211	0.31	-1.3
89,221	-		BACOVA_04211	0.31	-1.4
89,221	-		BACOVA_04211	0.31	-0.0
89,369	+		BACOVA_04211	0.39	-0.9
89,437	+		BACOVA_04211	0.43	-1.1
89,509	-		BACOVA_04211	0.46	-0.1
89,511	-		BACOVA_04211	0.46	-0.1
89,589	-		BACOVA_04211	0.51	-0.9
89,658	-		BACOVA_04211	0.54	+0.8
89,736	-		BACOVA_04211	0.59	+0.3
89,755	+		BACOVA_04211	0.60	-0.7
89,804	+		BACOVA_04211	0.62	-0.3
89,811	-		BACOVA_04211	0.63	+0.9
89,814	+		BACOVA_04211	0.63	+0.1
89,814	+		BACOVA_04211	0.63	-0.1
89,822	+		BACOVA_04211	0.63	+0.5
89,845	+		BACOVA_04211	0.64	-1.1
89,846	-		BACOVA_04211	0.64	-0.5
89,883	-		BACOVA_04211	0.66	+0.4
89,919	+		BACOVA_04211	0.68	-0.8
89,952	+		BACOVA_04211	0.70	+0.0
89,990	-		BACOVA_04211	0.72	-0.3
90,122	+		BACOVA_04211	0.79	+0.2
90,148	-		BACOVA_04211	0.81	-0.2
90,276	-		BACOVA_04211	0.87	+1.6
90,327	+				+0.4
90,328	-				+0.6
90,330	+				-1.1
90,341	+				+0.2
90,341	+				+0.9
90,341	+				-1.1
90,342	-				-3.0
90,364	-				-1.0
90,370	+				+0.4
90,370	+				-0.3
90,370	+				-0.4
90,371	-				-1.1
90,376	-				-0.1
90,376	-				+0.6
90,403	+				+1.3
90,487	+				-1.5
90,487	+				+0.8
90,488	-				-0.3
90,497	+				+0.7
90,497	+				+0.4
90,529	+				-0.1
90,529	+				+0.3
90,540	-				+0.5
90,610	+		BACOVA_04212	0.12	-0.4
90,611	-		BACOVA_04212	0.12	+0.1
90,611	-		BACOVA_04212	0.12	-0.9
90,613	-		BACOVA_04212	0.13	-0.3
90,613	-		BACOVA_04212	0.13	-1.7
90,788	+		BACOVA_04212	0.34	-0.3
90,826	+		BACOVA_04212	0.39	+0.3
90,831	-		BACOVA_04212	0.40	+1.3
90,831	-		BACOVA_04212	0.40	-0.1
90,853	+		BACOVA_04212	0.43	-1.9
90,853	+		BACOVA_04212	0.43	+0.1
90,900	+		BACOVA_04212	0.48	-2.3
90,900	+		BACOVA_04212	0.48	+0.1
90,901	-		BACOVA_04212	0.49	-0.8
90,916	+		BACOVA_04212	0.50	+0.7
90,916	+		BACOVA_04212	0.50	+0.7
91,000	+		BACOVA_04212	0.61	-0.0
91,033	+		BACOVA_04212	0.65	+1.9
91,039	-		BACOVA_04212	0.66	+0.3
91,071	+		BACOVA_04212	0.70	-0.7
91,072	-		BACOVA_04212	0.70	+0.2
91,168	+		BACOVA_04212	0.82	+0.5
91,200	-		BACOVA_04212	0.86	-0.6
91,263	+				+0.8
91,263	+				+0.1
91,264	-				+1.0
91,264	-				+0.4
91,294	+				-0.7
91,294	+				-1.3
91,295	-				-0.9
91,295	-				-1.0
91,352	+				+0.2
91,356	+				+1.5
91,363	+				-0.1
91,390	+				-0.4
91,411	-				-1.4
91,428	+				+0.6
91,431	-				-1.5
91,452	+				-1.1
91,470	+				-0.3
91,473	-				-0.5
91,473	-				+0.2
91,473	-				-0.1
91,479	+				+0.6
91,480	-				-1.1
91,483	-				-1.4