Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03082

Experiment: Pectin from citrus peel; filtered 1 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; filtered 1 mg/ml (C)
152,435	+		BACOVA_03081	0.54	-0.2
152,435	+		BACOVA_03081	0.54	+0.4
152,436	-		BACOVA_03081	0.54	+0.0
152,439	-		BACOVA_03081	0.54	+0.4
152,439	-		BACOVA_03081	0.54	-1.5
152,472	-		BACOVA_03081	0.57	-0.2
152,475	-		BACOVA_03081	0.57	-0.2
152,475	-		BACOVA_03081	0.57	-0.0
152,478	-		BACOVA_03081	0.57	-0.3
152,478	-		BACOVA_03081	0.57	+1.1
152,493	-		BACOVA_03081	0.59	+0.2
152,503	+		BACOVA_03081	0.59	-0.7
152,547	+		BACOVA_03081	0.63	-0.2
152,547	+		BACOVA_03081	0.63	+0.5
152,548	-		BACOVA_03081	0.63	-0.2
152,548	-		BACOVA_03081	0.63	+0.1
152,606	+		BACOVA_03081	0.68	+1.3
152,687	+		BACOVA_03081	0.75	+1.0
152,687	+		BACOVA_03081	0.75	+0.4
152,700	+		BACOVA_03081	0.76	-0.9
152,701	-		BACOVA_03081	0.76	+0.7
152,733	+		BACOVA_03081	0.79	+0.7
152,756	+		BACOVA_03081	0.81	+0.5
152,756	+		BACOVA_03081	0.81	+0.3
152,774	-		BACOVA_03081	0.83	+0.6
152,776	-		BACOVA_03081	0.83	+0.2
152,776	-		BACOVA_03081	0.83	+0.3
152,781	-		BACOVA_03081	0.83	-0.5
152,857	-		BACOVA_03081	0.90	+0.3
152,872	+				+0.8
152,873	-				+0.5
152,901	+				+1.6
152,902	-				-0.7
152,910	+				+1.1
152,911	-				+0.6
152,911	-				-0.2
152,928	-				-0.0
152,949	-				+0.4
152,949	-				+0.4
152,962	+				-1.6
153,001	+				-0.9
153,017	+				+0.8
153,030	+				-0.0
153,053	+				-1.5
153,054	-				+0.8
153,441	+				-0.2
153,484	-				-1.4
153,597	+				+0.8
153,598	-				-0.7
153,598	-				-2.0
153,598	-				+2.1
153,625	-				+1.5
153,656	+				-2.7
153,699	+				+0.5
153,699	+				-0.7
153,700	-				-0.3
153,700	-				-1.8
153,733	-				-1.7
153,744	+		BACOVA_03082	0.10	-1.4
153,744	+		BACOVA_03082	0.10	-0.7
153,745	-		BACOVA_03082	0.10	+0.8
153,745	-		BACOVA_03082	0.10	+0.0
153,755	-		BACOVA_03082	0.10	-1.0
153,755	-		BACOVA_03082	0.10	+0.3
153,795	+		BACOVA_03082	0.12	-0.8
153,799	+		BACOVA_03082	0.12	-2.6
153,820	-		BACOVA_03082	0.13	-0.3
153,823	+		BACOVA_03082	0.13	-0.6
153,839	-		BACOVA_03082	0.13	-0.4
153,847	+		BACOVA_03082	0.13	-0.0
153,847	+		BACOVA_03082	0.13	+1.3
153,848	-		BACOVA_03082	0.13	-0.3
153,903	+		BACOVA_03082	0.15	-0.5
153,910	+		BACOVA_03082	0.15	-1.5
153,967	-		BACOVA_03082	0.17	-0.2
154,004	+		BACOVA_03082	0.18	-1.3
154,027	+		BACOVA_03082	0.19	-0.2
154,028	-		BACOVA_03082	0.19	-1.5
154,028	-		BACOVA_03082	0.19	-0.3
154,089	+		BACOVA_03082	0.21	+0.4
154,118	+		BACOVA_03082	0.22	+0.7
154,118	+		BACOVA_03082	0.22	-0.7
154,144	+		BACOVA_03082	0.23	-1.2
154,156	+		BACOVA_03082	0.23	-3.8
154,156	+		BACOVA_03082	0.23	+0.0
154,160	-		BACOVA_03082	0.23	+1.3
154,191	+		BACOVA_03082	0.24	-0.2
154,228	-		BACOVA_03082	0.26	+0.2
154,253	+		BACOVA_03082	0.26	+0.1
154,275	+		BACOVA_03082	0.27	-1.5
154,277	+		BACOVA_03082	0.27	-0.2
154,277	+		BACOVA_03082	0.27	+0.6
154,277	+		BACOVA_03082	0.27	-1.2
154,278	-		BACOVA_03082	0.27	+0.7
154,278	-		BACOVA_03082	0.27	-0.2
154,279	+		BACOVA_03082	0.27	-0.6
154,279	+		BACOVA_03082	0.27	+0.2
154,280	-		BACOVA_03082	0.27	+0.8
154,357	+		BACOVA_03082	0.30	-1.2
154,357	+		BACOVA_03082	0.30	+0.4
154,418	+		BACOVA_03082	0.32	-1.2
154,418	+		BACOVA_03082	0.32	+1.2
154,420	+		BACOVA_03082	0.32	-0.3
154,426	+		BACOVA_03082	0.32	-0.5
154,426	+		BACOVA_03082	0.32	+0.0
154,426	+		BACOVA_03082	0.32	+0.8
154,427	-		BACOVA_03082	0.32	+0.4
154,427	-		BACOVA_03082	0.32	-0.5
154,431	+		BACOVA_03082	0.32	-1.1
154,432	-		BACOVA_03082	0.32	+0.3
154,478	-		BACOVA_03082	0.34	-1.4
154,478	-		BACOVA_03082	0.34	+1.3
154,487	-		BACOVA_03082	0.34	+0.5
154,522	+		BACOVA_03082	0.35	+0.3
154,522	+		BACOVA_03082	0.35	-0.2
154,522	+		BACOVA_03082	0.35	+0.5
154,523	-		BACOVA_03082	0.35	-0.2
154,523	-		BACOVA_03082	0.35	+0.9
154,580	-		BACOVA_03082	0.37	-0.3
154,592	+		BACOVA_03082	0.37	-0.0
154,593	-		BACOVA_03082	0.37	-1.9
154,593	-		BACOVA_03082	0.37	-1.2
154,593	-		BACOVA_03082	0.37	+1.8
154,597	-		BACOVA_03082	0.38	-0.1
154,597	-		BACOVA_03082	0.38	-0.3
154,597	-		BACOVA_03082	0.38	+0.4
154,642	+		BACOVA_03082	0.39	-0.3
154,643	-		BACOVA_03082	0.39	+0.0
154,643	-		BACOVA_03082	0.39	-0.2
154,664	-		BACOVA_03082	0.40	+2.4
154,681	+		BACOVA_03082	0.40	+0.4
154,688	-		BACOVA_03082	0.40	+0.5
154,689	+		BACOVA_03082	0.40	-1.2
154,689	+		BACOVA_03082	0.40	-1.2
154,741	-		BACOVA_03082	0.42	-1.5
154,741	-		BACOVA_03082	0.42	-0.1
154,759	+		BACOVA_03082	0.43	-1.3
154,762	+		BACOVA_03082	0.43	-1.0
154,780	+		BACOVA_03082	0.43	-0.5
154,781	-		BACOVA_03082	0.43	-0.7
154,781	-		BACOVA_03082	0.43	-0.9
154,784	-		BACOVA_03082	0.44	+0.2
154,795	+		BACOVA_03082	0.44	-0.4
154,801	+		BACOVA_03082	0.44	+0.5
154,814	-		BACOVA_03082	0.44	+0.7
154,814	-		BACOVA_03082	0.44	+0.3
154,838	+		BACOVA_03082	0.45	-1.2
154,838	+		BACOVA_03082	0.45	-3.2
154,861	+		BACOVA_03082	0.46	-1.6
154,907	-		BACOVA_03082	0.47	-0.1
154,907	-		BACOVA_03082	0.47	+1.4
154,911	+		BACOVA_03082	0.48	+0.5
154,912	-		BACOVA_03082	0.48	+0.7
154,930	-		BACOVA_03082	0.48	-1.7
154,970	-		BACOVA_03082	0.49	+0.0
154,980	+		BACOVA_03082	0.50	-1.2
154,981	-		BACOVA_03082	0.50	-0.0
154,993	-		BACOVA_03082	0.50	+0.1
155,027	+		BACOVA_03082	0.51	-1.5
155,036	-		BACOVA_03082	0.52	-0.3
155,040	+		BACOVA_03082	0.52	+0.3
155,040	+		BACOVA_03082	0.52	-0.7
155,041	-		BACOVA_03082	0.52	+1.0
155,053	+		BACOVA_03082	0.52	+0.4
155,054	-		BACOVA_03082	0.52	+0.7
155,120	+		BACOVA_03082	0.54	+0.3
155,120	+		BACOVA_03082	0.54	-0.4
155,120	+		BACOVA_03082	0.54	-0.8
155,120	+		BACOVA_03082	0.54	-1.0
155,120	+		BACOVA_03082	0.54	+0.7
155,121	-		BACOVA_03082	0.54	+1.2
155,126	+		BACOVA_03082	0.54	-0.0
155,126	+		BACOVA_03082	0.54	-1.4
155,126	+		BACOVA_03082	0.54	+1.6
155,126	+		BACOVA_03082	0.54	+0.8
155,126	+		BACOVA_03082	0.54	+0.0
155,127	-		BACOVA_03082	0.55	-0.5
155,127	-		BACOVA_03082	0.55	-0.3
155,127	-		BACOVA_03082	0.55	-0.7
155,127	-		BACOVA_03082	0.55	+1.0
155,128	+		BACOVA_03082	0.55	+0.1
155,129	-		BACOVA_03082	0.55	-0.2
155,129	-		BACOVA_03082	0.55	-1.2
155,131	+		BACOVA_03082	0.55	+0.3
155,187	+		BACOVA_03082	0.56	-0.0
155,187	+		BACOVA_03082	0.56	-0.6
155,189	+		BACOVA_03082	0.56	-0.8
155,198	-		BACOVA_03082	0.57	+0.8
155,198	-		BACOVA_03082	0.57	-1.2
155,201	-		BACOVA_03082	0.57	+0.9
155,201	-		BACOVA_03082	0.57	-0.8
155,219	-		BACOVA_03082	0.57	-2.2
155,235	+		BACOVA_03082	0.58	+1.4
155,235	+		BACOVA_03082	0.58	-0.7
155,246	-		BACOVA_03082	0.58	+0.6
155,265	+		BACOVA_03082	0.59	-0.0
155,276	-		BACOVA_03082	0.59	+0.3
155,285	+		BACOVA_03082	0.60	-0.6
155,309	-		BACOVA_03082	0.60	+0.6
155,344	+		BACOVA_03082	0.61	-1.2
155,375	+		BACOVA_03082	0.62	-2.1
155,380	+		BACOVA_03082	0.63	+1.3
155,381	-		BACOVA_03082	0.63	-0.2
155,390	-		BACOVA_03082	0.63	-1.4
155,420	-		BACOVA_03082	0.64	+0.7
155,424	-		BACOVA_03082	0.64	+0.9
155,441	+		BACOVA_03082	0.65	-0.9
155,442	-		BACOVA_03082	0.65	-0.9
155,454	-		BACOVA_03082	0.65	+0.3
155,462	-		BACOVA_03082	0.65	+0.3
155,501	-		BACOVA_03082	0.67	-0.6
155,605	+		BACOVA_03082	0.70	+0.2
155,613	-		BACOVA_03082	0.70	-0.5
155,617	+		BACOVA_03082	0.70	+0.2
155,618	-		BACOVA_03082	0.70	+0.0
155,623	+		BACOVA_03082	0.70	+0.3
155,624	-		BACOVA_03082	0.70	-1.6
155,643	+		BACOVA_03082	0.71	-0.3
155,647	+		BACOVA_03082	0.71	-0.2
155,648	-		BACOVA_03082	0.71	+0.8
155,687	-		BACOVA_03082	0.72	-1.5
155,724	+		BACOVA_03082	0.74	+0.1
155,794	+		BACOVA_03082	0.76	-0.5
155,814	+		BACOVA_03082	0.77	+2.0
155,837	-		BACOVA_03082	0.77	-0.3
155,862	+		BACOVA_03082	0.78	-0.2
155,870	-		BACOVA_03082	0.78	-1.2
155,870	-		BACOVA_03082	0.78	+0.0
155,879	-		BACOVA_03082	0.79	-0.1
155,901	-		BACOVA_03082	0.79	+0.5
155,901	-		BACOVA_03082	0.79	+0.5
155,945	-		BACOVA_03082	0.81	+1.1
155,974	+		BACOVA_03082	0.82	-1.1
155,997	+		BACOVA_03082	0.82	-1.1
155,997	+		BACOVA_03082	0.82	-2.4
155,997	+		BACOVA_03082	0.82	+0.4
155,997	+		BACOVA_03082	0.82	+1.3
155,997	+		BACOVA_03082	0.82	-0.7
155,997	+		BACOVA_03082	0.82	-0.3
155,997	+		BACOVA_03082	0.82	-1.0
155,997	+		BACOVA_03082	0.82	-0.6
155,997	+		BACOVA_03082	0.82	+1.8
155,997	+		BACOVA_03082	0.82	+1.0
155,998	-		BACOVA_03082	0.82	-1.0
155,998	-		BACOVA_03082	0.82	-2.3
155,998	-		BACOVA_03082	0.82	-0.2
155,998	-		BACOVA_03082	0.82	-1.1
155,998	-		BACOVA_03082	0.82	-0.7
155,998	-		BACOVA_03082	0.82	-0.6
155,998	-		BACOVA_03082	0.82	+0.2
156,029	-		BACOVA_03082	0.83	+1.0
156,034	+		BACOVA_03082	0.84	-1.8
156,034	+		BACOVA_03082	0.84	-0.5
156,035	-		BACOVA_03082	0.84	-0.9
156,035	-		BACOVA_03082	0.84	-0.5
156,035	-		BACOVA_03082	0.84	-0.2
156,039	-		BACOVA_03082	0.84	+0.6
156,039	-		BACOVA_03082	0.84	+0.5
156,041	-		BACOVA_03082	0.84	-0.2
156,093	-		BACOVA_03082	0.85	+0.6
156,106	-		BACOVA_03082	0.86	-0.2
156,106	-		BACOVA_03082	0.86	+0.8
156,144	+		BACOVA_03082	0.87	+0.8
156,145	-		BACOVA_03082	0.87	-0.5
156,184	-		BACOVA_03082	0.88	+0.7
156,206	+		BACOVA_03082	0.89	+0.9
156,207	-		BACOVA_03082	0.89	-1.2
156,208	+		BACOVA_03082	0.89	-1.3
156,209	-		BACOVA_03082	0.89	+0.7
156,214	+		BACOVA_03082	0.89	-0.6
156,215	-		BACOVA_03082	0.89	-0.7
156,245	+				-0.6
156,256	+				-0.5
156,256	-				-0.3
156,272	-				-1.7
156,287	-				-0.7
156,290	+				+0.8
156,290	+				+1.8
156,291	-				-0.2
156,291	-				-0.3
156,291	-				+0.6
156,321	+				+1.1
156,321	+				-0.7
156,322	-				-2.4
156,322	-				+0.3
156,322	-				+0.5
156,322	-				-0.5
156,334	+				-2.2
156,334	+				+0.4
156,335	-				-0.0
156,400	+				+0.1
156,400	+				-0.9
156,400	+				-2.5
156,416	-				+0.4
156,416	-				-0.2
156,433	+				+0.7
156,433	+				-0.0
156,434	-				+1.5
156,434	-				-1.0
156,434	-				-1.0
156,449	-				+0.5
156,449	-				-1.0
156,484	-				-1.0
156,491	-				-0.7
156,498	+				+0.7
156,499	-				-0.5
156,499	-				+2.2
156,499	-				-1.1
156,523	+				+0.0
156,557	+				-2.2
156,557	+				-0.4
156,562	+				+0.2
156,610	+				+1.3
156,610	+				-0.4
156,610	+				+1.2
156,611	-				-2.0
156,611	-				-0.3
156,620	+				-2.5
156,687	-				-1.2
156,690	+				-0.0
156,691	-				+0.5
156,691	-				+0.0
156,735	+		BACOVA_03083	0.12	+0.0
156,736	-		BACOVA_03083	0.12	+0.2
156,737	+		BACOVA_03083	0.12	-0.2
156,750	-		BACOVA_03083	0.13	+0.1
156,808	+		BACOVA_03083	0.17	+1.8
156,811	-		BACOVA_03083	0.17	+0.1
156,815	+		BACOVA_03083	0.18	-1.6
156,816	-		BACOVA_03083	0.18	+1.1
156,816	-		BACOVA_03083	0.18	-1.4
156,852	+		BACOVA_03083	0.20	-0.0
156,872	+		BACOVA_03083	0.21	-0.0
156,872	+		BACOVA_03083	0.21	+0.3
156,873	-		BACOVA_03083	0.22	+0.3
156,884	-		BACOVA_03083	0.22	-0.2
156,884	-		BACOVA_03083	0.22	-1.0
156,884	-		BACOVA_03083	0.22	+0.1
156,941	+		BACOVA_03083	0.26	+0.5
156,962	+		BACOVA_03083	0.28	+0.4
156,962	+		BACOVA_03083	0.28	-0.1
156,963	-		BACOVA_03083	0.28	-0.5
156,966	+		BACOVA_03083	0.28	+0.3
157,058	-		BACOVA_03083	0.34	-0.5
157,058	-		BACOVA_03083	0.34	+0.8
157,093	+		BACOVA_03083	0.37	+1.1
157,093	+		BACOVA_03083	0.37	-0.4
157,103	-		BACOVA_03083	0.37	-0.4
157,143	+		BACOVA_03083	0.40	+0.0
157,144	-		BACOVA_03083	0.40	+1.3
157,147	-		BACOVA_03083	0.40	+0.5
157,157	+		BACOVA_03083	0.41	+0.5
157,157	+		BACOVA_03083	0.41	+0.3
157,158	-		BACOVA_03083	0.41	+0.4
157,211	+		BACOVA_03083	0.45	+0.8
157,216	+		BACOVA_03083	0.45	+0.7
157,217	-		BACOVA_03083	0.45	+0.3
157,217	-		BACOVA_03083	0.45	-0.0
157,220	+		BACOVA_03083	0.45	-1.3
157,221	-		BACOVA_03083	0.45	+2.7
157,244	+		BACOVA_03083	0.47	-1.0
157,245	-		BACOVA_03083	0.47	-0.3
157,250	+		BACOVA_03083	0.47	-0.5
157,309	-		BACOVA_03083	0.51	+0.5
157,313	+		BACOVA_03083	0.52	+0.0
157,350	-		BACOVA_03083	0.54	+0.3
157,375	+		BACOVA_03083	0.56	+0.1
157,395	+		BACOVA_03083	0.57	-0.7
157,396	-		BACOVA_03083	0.57	-0.6
157,397	+		BACOVA_03083	0.57	-0.2
157,398	-		BACOVA_03083	0.57	-0.5
157,398	-		BACOVA_03083	0.57	+1.1
157,468	+		BACOVA_03083	0.62	+0.5
157,469	-		BACOVA_03083	0.62	-0.0
157,487	+		BACOVA_03083	0.64	-0.5
157,537	+		BACOVA_03083	0.67	-0.8
157,537	+		BACOVA_03083	0.67	-0.4
157,538	-		BACOVA_03083	0.67	-0.7
157,538	-		BACOVA_03083	0.67	-0.4