Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03038

Experiment: Pectin from citrus peel; filtered 1 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; filtered 1 mg/ml (C)
112,298	+		BACOVA_03037	0.16	-0.5
112,299	-		BACOVA_03037	0.16	+0.6
112,304	-		BACOVA_03037	0.17	-0.5
112,314	+		BACOVA_03037	0.17	-2.2
112,426	-		BACOVA_03037	0.27	+0.5
112,461	+		BACOVA_03037	0.30	+1.7
112,461	+		BACOVA_03037	0.30	-0.7
112,462	-		BACOVA_03037	0.30	+1.7
112,462	-		BACOVA_03037	0.30	-0.4
112,462	-		BACOVA_03037	0.30	+0.7
112,482	-		BACOVA_03037	0.31	+0.6
112,511	+		BACOVA_03037	0.34	-0.6
112,512	-		BACOVA_03037	0.34	-0.0
112,520	-		BACOVA_03037	0.35	-1.7
112,552	+		BACOVA_03037	0.37	+0.5
112,599	+		BACOVA_03037	0.41	-0.5
112,600	-		BACOVA_03037	0.41	-0.6
112,610	+		BACOVA_03037	0.42	+0.3
112,610	+		BACOVA_03037	0.42	+2.0
112,610	+		BACOVA_03037	0.42	-0.3
112,611	-		BACOVA_03037	0.42	+1.0
112,611	-		BACOVA_03037	0.42	+1.3
112,622	-		BACOVA_03037	0.43	+0.2
112,708	+		BACOVA_03037	0.50	-0.8
112,763	-		BACOVA_03037	0.55	-1.0
112,763	-		BACOVA_03037	0.55	-0.6
112,764	+		BACOVA_03037	0.55	-0.7
112,798	+		BACOVA_03037	0.58	-0.2
112,814	-		BACOVA_03037	0.59	+1.6
112,859	-		BACOVA_03037	0.63	+0.2
112,877	+		BACOVA_03037	0.64	+0.4
112,877	+		BACOVA_03037	0.64	+0.1
112,878	-		BACOVA_03037	0.64	-0.9
112,881	+		BACOVA_03037	0.65	+0.8
112,882	-		BACOVA_03037	0.65	+0.2
112,882	-		BACOVA_03037	0.65	-2.0
112,897	+		BACOVA_03037	0.66	+1.8
112,905	+		BACOVA_03037	0.67	+0.9
112,906	-		BACOVA_03037	0.67	+0.3
112,961	-		BACOVA_03037	0.71	+0.4
112,972	+		BACOVA_03037	0.72	-0.3
112,987	-		BACOVA_03037	0.74	+1.6
112,993	-		BACOVA_03037	0.74	-1.3
113,026	+		BACOVA_03037	0.77	-0.6
113,027	-		BACOVA_03037	0.77	-1.2
113,047	+		BACOVA_03037	0.79	+0.3
113,051	-		BACOVA_03037	0.79	-0.5
113,079	+		BACOVA_03037	0.81	+0.1
113,083	+		BACOVA_03037	0.82	-0.5
113,084	-		BACOVA_03037	0.82	+0.1
113,091	+		BACOVA_03037	0.82	-0.3
113,178	-		BACOVA_03037	0.90	-1.2
113,201	-				+0.6
113,221	+				-0.4
113,221	+				+0.7
113,221	+				+0.3
113,222	-				+0.1
113,241	+				-1.3
113,242	-				-0.7
113,254	+				+0.2
113,284	+				+0.5
113,284	+				-0.2
113,284	+				-0.5
113,285	-				-0.5
113,380	+				-0.5
113,380	+				+1.0
113,438	-		BACOVA_03038	0.10	-0.2
113,438	-		BACOVA_03038	0.10	+0.6
113,459	+		BACOVA_03038	0.12	-0.2
113,460	-		BACOVA_03038	0.12	+0.3
113,460	-		BACOVA_03038	0.12	+0.4
113,483	-		BACOVA_03038	0.13	-0.5
113,547	+		BACOVA_03038	0.18	-0.2
113,557	+		BACOVA_03038	0.19	+0.8
113,558	-		BACOVA_03038	0.19	-0.5
113,558	-		BACOVA_03038	0.19	-0.8
113,579	-		BACOVA_03038	0.20	-0.5
113,669	-		BACOVA_03038	0.27	-1.0
113,681	+		BACOVA_03038	0.27	+0.0
113,705	-		BACOVA_03038	0.29	-0.2
113,705	-		BACOVA_03038	0.29	+0.5
113,707	+		BACOVA_03038	0.29	+0.1
113,759	+		BACOVA_03038	0.33	+0.1
113,771	+		BACOVA_03038	0.34	+0.0
113,807	+		BACOVA_03038	0.36	+0.4
113,846	+		BACOVA_03038	0.39	-0.5
113,846	+		BACOVA_03038	0.39	-0.7
113,858	+		BACOVA_03038	0.40	+0.2
113,882	-		BACOVA_03038	0.42	+0.9
113,882	-		BACOVA_03038	0.42	-1.5
113,903	+		BACOVA_03038	0.43	-0.9
113,903	+		BACOVA_03038	0.43	-0.2
113,904	-		BACOVA_03038	0.43	-0.2
113,918	-		BACOVA_03038	0.44	+0.4
113,918	-		BACOVA_03038	0.44	-0.1
113,966	-		BACOVA_03038	0.48	+0.8
113,966	-		BACOVA_03038	0.48	-0.4
113,994	-		BACOVA_03038	0.50	-1.2
114,064	+		BACOVA_03038	0.54	+1.1
114,065	-		BACOVA_03038	0.55	-1.7
114,080	+		BACOVA_03038	0.56	+1.2
114,080	+		BACOVA_03038	0.56	-0.3
114,080	+		BACOVA_03038	0.56	-1.2
114,114	-		BACOVA_03038	0.58	+0.1
114,144	-		BACOVA_03038	0.60	+0.6
114,149	+		BACOVA_03038	0.61	-0.5
114,149	+		BACOVA_03038	0.61	+1.5
114,149	+		BACOVA_03038	0.61	-1.3
114,168	-		BACOVA_03038	0.62	+0.8
114,181	+		BACOVA_03038	0.63	+0.3
114,181	+		BACOVA_03038	0.63	+0.5
114,182	-		BACOVA_03038	0.63	+0.6
114,187	+		BACOVA_03038	0.63	-0.2
114,217	+		BACOVA_03038	0.65	+0.1
114,219	+		BACOVA_03038	0.65	-0.5
114,235	+		BACOVA_03038	0.67	-0.7
114,237	+		BACOVA_03038	0.67	-0.3
114,237	+		BACOVA_03038	0.67	-1.2
114,238	-		BACOVA_03038	0.67	+0.7
114,238	-		BACOVA_03038	0.67	-0.1
114,273	+		BACOVA_03038	0.69	-2.1
114,323	-		BACOVA_03038	0.73	+0.8
114,344	+		BACOVA_03038	0.74	+1.1
114,344	+		BACOVA_03038	0.74	+0.8
114,383	-		BACOVA_03038	0.77	-0.7
114,408	-		BACOVA_03038	0.79	+0.5
114,420	-		BACOVA_03038	0.80	-0.1
114,485	+		BACOVA_03038	0.84	-0.3
114,486	-		BACOVA_03038	0.84	+0.2
114,495	+		BACOVA_03038	0.85	+0.8
114,495	+		BACOVA_03038	0.85	+0.0
114,556	-		BACOVA_03038	0.89	+0.2
114,559	-		BACOVA_03038	0.90	+0.4
114,559	-		BACOVA_03038	0.90	+0.4
114,560	+		BACOVA_03038	0.90	-0.3
114,560	+		BACOVA_03038	0.90	+0.5
114,561	-		BACOVA_03038	0.90	-0.4
114,585	-				-0.1
114,611	+				-0.5
114,612	-				-1.3
114,684	-				+0.4
114,689	+				-0.9
114,689	+				+1.0
114,690	-				+2.4
114,690	-				-1.3
114,710	+				-0.0
114,717	+				+0.7
114,717	+				-2.0
114,731	-				-0.7
114,748	-				+0.5
114,812	+				-0.6
114,828	-				+1.8
114,836	-		BACOVA_03039	0.16	+0.8
114,836	-		BACOVA_03039	0.16	-0.2
114,840	+		BACOVA_03039	0.20	+0.1
114,841	-		BACOVA_03039	0.21	-1.1
114,855	+		BACOVA_03039	0.34	+0.7
114,866	+		BACOVA_03039	0.45	-0.4
114,879	-		BACOVA_03039	0.57	-0.7
114,880	+		BACOVA_03039	0.58	-0.6
114,880	+		BACOVA_03039	0.58	-0.3
114,881	-		BACOVA_03039	0.59	+0.6
114,893	+		BACOVA_03039	0.70	-2.2
114,894	-		BACOVA_03039	0.71	-2.2
114,908	+		BACOVA_03039	0.85	-1.2
114,930	+				+0.7
115,036	+		BACOVA_03040	0.37	+0.0
115,053	+		BACOVA_03040	0.51	-0.4
115,096	+		BACOVA_03040	0.87	-0.5
115,109	+				+0.8
115,109	+				-1.0
115,110	-				+0.4
115,152	-				-2.0
115,152	-				+0.4
115,163	+				+0.2
115,164	-				-0.5
115,203	+		BACOVA_03041	0.13	-0.9
115,204	-		BACOVA_03041	0.14	-0.7
115,255	+		BACOVA_03041	0.57	-1.7
115,276	-		BACOVA_03041	0.75	-1.2
115,277	+		BACOVA_03041	0.76	-3.2
115,278	-		BACOVA_03041	0.77	-0.4
115,308	+				-2.2
115,309	-				+0.7
115,366	+		BACOVA_03042	0.13	-0.7
115,367	-		BACOVA_03042	0.13	-0.4
115,373	-		BACOVA_03042	0.14	+0.4
115,456	+		BACOVA_03042	0.32	-2.0
115,456	+		BACOVA_03042	0.32	+0.0
115,456	+		BACOVA_03042	0.32	-0.7
115,457	-		BACOVA_03042	0.32	-0.7
115,466	+		BACOVA_03042	0.34	+1.7
115,467	-		BACOVA_03042	0.34	-0.7
115,470	+		BACOVA_03042	0.35	+0.5
115,505	+		BACOVA_03042	0.42	-0.4
115,512	+		BACOVA_03042	0.44	+1.4
115,512	+		BACOVA_03042	0.44	-1.2
115,530	+		BACOVA_03042	0.48	-0.2
115,531	-		BACOVA_03042	0.48	-0.6
115,556	+		BACOVA_03042	0.53	-0.5
115,568	+		BACOVA_03042	0.56	-1.3
115,601	-		BACOVA_03042	0.63	-0.4
115,609	+		BACOVA_03042	0.65	-0.0
115,647	+		BACOVA_03042	0.73	+0.4