Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03423

Experiment: Arabinoxylan (Rye Flour) 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour) 2.5 mg/ml (C)
136,585	-		BACOVA_03422	0.61	-1.0
136,585	-		BACOVA_03422	0.61	+0.7
136,615	+		BACOVA_03422	0.63	+1.0
136,615	+		BACOVA_03422	0.63	+2.0
136,616	-		BACOVA_03422	0.63	-1.3
136,639	-		BACOVA_03422	0.64	-1.3
136,639	-		BACOVA_03422	0.64	-0.2
136,639	-		BACOVA_03422	0.64	+0.6
136,661	-		BACOVA_03422	0.64	-1.2
136,672	+		BACOVA_03422	0.65	+0.3
136,672	+		BACOVA_03422	0.65	-0.1
136,672	+		BACOVA_03422	0.65	+1.7
136,672	+		BACOVA_03422	0.65	+0.6
136,735	+		BACOVA_03422	0.67	-1.0
136,775	+		BACOVA_03422	0.69	+3.3
136,776	-		BACOVA_03422	0.69	-1.0
136,778	-		BACOVA_03422	0.69	-1.4
136,778	-		BACOVA_03422	0.69	-0.0
136,778	-		BACOVA_03422	0.69	-1.6
136,778	-		BACOVA_03422	0.69	-1.3
136,800	-		BACOVA_03422	0.70	-1.9
136,805	+		BACOVA_03422	0.70	+1.1
136,825	+		BACOVA_03422	0.71	+1.3
136,826	-		BACOVA_03422	0.71	-0.1
136,831	+		BACOVA_03422	0.71	+0.6
136,832	-		BACOVA_03422	0.71	-0.8
136,933	+		BACOVA_03422	0.76	+1.2
136,934	-		BACOVA_03422	0.76	-1.0
136,935	+		BACOVA_03422	0.76	+1.0
136,936	-		BACOVA_03422	0.76	-1.0
136,983	+		BACOVA_03422	0.78	+1.8
136,984	-		BACOVA_03422	0.78	-1.3
137,000	+		BACOVA_03422	0.78	+1.6
137,089	-		BACOVA_03422	0.82	-0.4
137,091	+		BACOVA_03422	0.82	+2.3
137,097	-		BACOVA_03422	0.82	-0.3
137,098	+		BACOVA_03422	0.82	+0.9
137,098	+		BACOVA_03422	0.82	+0.3
137,099	-		BACOVA_03422	0.82	-0.6
137,099	-		BACOVA_03422	0.82	-1.3
137,179	-		BACOVA_03422	0.86	-3.0
137,179	-		BACOVA_03422	0.86	-1.2
137,191	-		BACOVA_03422	0.86	-0.1
137,201	-		BACOVA_03422	0.87	-2.5
137,217	+		BACOVA_03422	0.87	+2.0
137,220	+		BACOVA_03422	0.87	-0.6
137,245	+		BACOVA_03422	0.88	+1.5
137,338	+				-0.1
137,339	-				+0.1
137,339	-				-1.9
137,339	-				-0.5
137,345	-				-1.4
137,360	-				-0.8
137,360	-				-1.0
137,398	-				-0.6
137,398	-				-1.0
137,429	-				-2.6
137,429	-				-0.4
137,429	-				-0.8
137,452	-				-0.9
137,550	-				-0.0
137,577	-				-2.2
137,582	+				+0.7
137,583	-				+0.1
137,583	-				-1.1
137,597	+				+1.0
137,609	+				-0.0
137,614	+				+1.7
137,615	+				-0.0
137,615	-				+0.7
137,621	+				+0.5
137,622	-				-1.0
137,625	-				-0.5
137,654	-				-0.2
137,678	-				+1.0
137,694	-				-0.6
137,712	+				+1.2
137,720	+				+1.0
137,720	+				-0.6
137,830	+		BACOVA_03423	0.15	+0.4
137,841	+		BACOVA_03423	0.16	+1.1
137,872	+		BACOVA_03423	0.17	-0.0
137,872	+		BACOVA_03423	0.17	-0.3
137,872	+		BACOVA_03423	0.17	+0.7
137,872	+		BACOVA_03423	0.17	-0.0
137,877	+		BACOVA_03423	0.18	+1.2
137,877	+		BACOVA_03423	0.18	-0.6
137,878	-		BACOVA_03423	0.18	-0.6
137,878	-		BACOVA_03423	0.18	-0.2
137,897	-		BACOVA_03423	0.19	-0.4
137,928	+		BACOVA_03423	0.20	+1.4
137,951	+		BACOVA_03423	0.21	+0.8
137,951	+		BACOVA_03423	0.21	+1.0
137,952	-		BACOVA_03423	0.21	-2.0
137,969	+		BACOVA_03423	0.22	-0.0
137,983	-		BACOVA_03423	0.23	-0.8
138,001	+		BACOVA_03423	0.24	-0.3
138,001	+		BACOVA_03423	0.24	-0.0
138,003	-		BACOVA_03423	0.24	-0.0
138,038	-		BACOVA_03423	0.26	-1.3
138,077	+		BACOVA_03423	0.28	+0.5
138,078	-		BACOVA_03423	0.28	-0.9
138,127	-		BACOVA_03423	0.30	-0.9
138,127	-		BACOVA_03423	0.30	-1.0
138,172	-		BACOVA_03423	0.32	+1.3
138,172	-		BACOVA_03423	0.32	-0.3
138,204	-		BACOVA_03423	0.34	-0.7
138,286	-		BACOVA_03423	0.38	-0.5
138,287	+		BACOVA_03423	0.38	+1.1
138,329	+		BACOVA_03423	0.40	+1.1
138,375	-		BACOVA_03423	0.42	-2.3
138,375	-		BACOVA_03423	0.42	-0.2
138,465	+		BACOVA_03423	0.47	+1.3
138,465	+		BACOVA_03423	0.47	+1.0
138,466	-		BACOVA_03423	0.47	-0.0
138,467	+		BACOVA_03423	0.47	+0.5
138,467	+		BACOVA_03423	0.47	+0.7
138,468	-		BACOVA_03423	0.47	+1.0
138,468	-		BACOVA_03423	0.47	-0.4
138,468	-		BACOVA_03423	0.47	-0.9
138,468	-		BACOVA_03423	0.47	+1.0
138,471	+		BACOVA_03423	0.47	+0.4
138,472	-		BACOVA_03423	0.47	-1.1
138,497	+		BACOVA_03423	0.49	+1.6
138,518	+		BACOVA_03423	0.50	+2.4
138,519	-		BACOVA_03423	0.50	-0.6
138,522	+		BACOVA_03423	0.50	+0.2
138,523	-		BACOVA_03423	0.50	-1.7
138,541	-		BACOVA_03423	0.51	-0.8
138,542	+		BACOVA_03423	0.51	+1.9
138,607	+		BACOVA_03423	0.54	+1.0
138,618	-		BACOVA_03423	0.55	-1.0
138,618	-		BACOVA_03423	0.55	-0.0
138,636	-		BACOVA_03423	0.55	-0.8
138,675	+		BACOVA_03423	0.57	+0.6
138,678	-		BACOVA_03423	0.58	-2.5
138,691	-		BACOVA_03423	0.58	-0.7
138,723	-		BACOVA_03423	0.60	-2.6
138,749	+		BACOVA_03423	0.61	+0.5
138,750	-		BACOVA_03423	0.61	-1.5
138,750	-		BACOVA_03423	0.61	-0.5
138,828	-		BACOVA_03423	0.65	-0.0
138,838	-		BACOVA_03423	0.66	-0.4
138,868	-		BACOVA_03423	0.67	-2.0
138,878	-		BACOVA_03423	0.68	-0.1
138,896	+		BACOVA_03423	0.68	+1.1
138,896	+		BACOVA_03423	0.68	+1.6
138,920	+		BACOVA_03423	0.70	+1.6
138,921	-		BACOVA_03423	0.70	+0.5
138,921	-		BACOVA_03423	0.70	-2.0
138,921	-		BACOVA_03423	0.70	-1.5
138,924	+		BACOVA_03423	0.70	+1.1
138,925	-		BACOVA_03423	0.70	-2.3
138,929	+		BACOVA_03423	0.70	+0.7
138,930	-		BACOVA_03423	0.70	-2.3
138,953	-		BACOVA_03423	0.71	-0.8
139,047	-		BACOVA_03423	0.76	-0.6
139,081	-		BACOVA_03423	0.78	-1.6
139,083	+		BACOVA_03423	0.78	+1.4
139,134	+		BACOVA_03423	0.80	+0.4
139,265	-		BACOVA_03423	0.87	-0.1
139,289	+		BACOVA_03423	0.88	+0.7
139,293	+		BACOVA_03423	0.88	+0.7
139,293	+		BACOVA_03423	0.88	+0.5
139,294	-		BACOVA_03423	0.88	-0.9
139,298	+		BACOVA_03423	0.89	+0.2
139,332	-				+0.3
139,377	-				-1.8
139,414	+				+0.6
139,419	-				-0.0
139,427	+				+1.3
139,428	-				-0.0
139,428	-				-2.3
139,463	-				-1.0
139,490	+				+1.2
139,510	+				+1.9
139,513	+				+0.1
139,629	-				-2.2
139,664	+				+1.1
139,667	-				-1.3
139,668	+				+0.1
139,668	+				-0.8
139,668	+				+0.3
139,669	-				-1.3
139,669	-				-2.2
139,689	+		BACOVA_03424	0.11	-0.6
139,690	-		BACOVA_03424	0.11	-0.9
139,744	+		BACOVA_03424	0.15	+2.0
139,745	-		BACOVA_03424	0.15	-0.2
139,745	-		BACOVA_03424	0.15	+1.0
139,747	-		BACOVA_03424	0.15	-0.9
139,747	-		BACOVA_03424	0.15	-1.1
139,758	+		BACOVA_03424	0.16	-0.0
139,759	-		BACOVA_03424	0.16	-1.4
139,825	-		BACOVA_03424	0.21	-1.5
139,870	+		BACOVA_03424	0.24	-0.3
139,870	+		BACOVA_03424	0.24	+0.1
139,877	-		BACOVA_03424	0.25	-0.0
139,877	-		BACOVA_03424	0.25	-0.3
139,953	+		BACOVA_03424	0.31	-1.8
140,004	-		BACOVA_03424	0.34	-0.6
140,004	-		BACOVA_03424	0.34	-0.6
140,027	+		BACOVA_03424	0.36	+0.0
140,030	-		BACOVA_03424	0.36	-0.7
140,030	-		BACOVA_03424	0.36	-0.2
140,030	-		BACOVA_03424	0.36	-2.9
140,031	+		BACOVA_03424	0.36	+0.2
140,035	+		BACOVA_03424	0.37	-2.2
140,036	-		BACOVA_03424	0.37	-0.5
140,057	-		BACOVA_03424	0.38	-2.0
140,057	-		BACOVA_03424	0.38	-0.1
140,103	-		BACOVA_03424	0.42	-0.6
140,153	-		BACOVA_03424	0.46	-2.0
140,153	-		BACOVA_03424	0.46	-0.6
140,154	+		BACOVA_03424	0.46	+0.2
140,155	-		BACOVA_03424	0.46	-0.3
140,190	+		BACOVA_03424	0.48	+0.6
140,220	+		BACOVA_03424	0.51	+0.7
140,235	+		BACOVA_03424	0.52	+0.2
140,260	+		BACOVA_03424	0.54	+0.2
140,261	-		BACOVA_03424	0.54	-1.0
140,261	-		BACOVA_03424	0.54	-0.9
140,261	-		BACOVA_03424	0.54	-0.3
140,261	-		BACOVA_03424	0.54	+1.0
140,263	-		BACOVA_03424	0.54	+0.1
140,308	-		BACOVA_03424	0.57	-0.8
140,316	+		BACOVA_03424	0.58	-0.7
140,317	-		BACOVA_03424	0.58	-0.6
140,329	+		BACOVA_03424	0.59	-0.0
140,330	-		BACOVA_03424	0.59	+0.1
140,380	-		BACOVA_03424	0.63	-1.0
140,380	-		BACOVA_03424	0.63	+1.6
140,416	+		BACOVA_03424	0.65	+0.2
140,416	+		BACOVA_03424	0.65	+0.6
140,417	-		BACOVA_03424	0.65	+0.1
140,417	-		BACOVA_03424	0.65	-0.5
140,419	-		BACOVA_03424	0.66	-1.8
140,419	-		BACOVA_03424	0.66	-0.7
140,419	-		BACOVA_03424	0.66	-0.0
140,450	-		BACOVA_03424	0.68	+1.4