Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01714

Experiment: Arabinoxylan (Rye Flour) 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabinoxylan (Rye Flour) 2.5 mg/ml (C)
137,874	+		BACOVA_01712	0.80	-1.5
137,896	-		BACOVA_01712	0.83	-2.0
137,950	-				+0.8
137,998	-				-0.2
138,011	+				-2.0
138,065	-				-0.8
138,177	+		BACOVA_01713	0.22	-2.8
138,313	+		BACOVA_01713	0.40	-0.8
138,334	+		BACOVA_01713	0.43	-0.2
138,402	+		BACOVA_01713	0.52	-2.2
138,405	+		BACOVA_01713	0.52	-0.2
138,445	+		BACOVA_01713	0.58	-0.2
138,506	+		BACOVA_01713	0.66	-1.6
138,762	+				-1.6
138,804	+				-3.8
138,829	+				+0.8
138,886	+				-2.2
138,911	+				-0.6
138,920	+				-1.2
138,929	+				-1.8
138,990	+				+0.2
139,047	+		BACOVA_01714	0.10	-1.1
139,048	-		BACOVA_01714	0.11	-0.2
139,089	+		BACOVA_01714	0.13	-0.6
139,134	+		BACOVA_01714	0.16	-2.3
139,134	+		BACOVA_01714	0.16	-1.7
139,134	+		BACOVA_01714	0.16	-1.6
139,158	+		BACOVA_01714	0.17	-1.1
139,159	-		BACOVA_01714	0.17	-0.6
139,272	-		BACOVA_01714	0.24	-0.6
139,294	-		BACOVA_01714	0.25	-0.8
139,310	+		BACOVA_01714	0.26	-2.2
139,310	+		BACOVA_01714	0.26	-1.5
139,312	+		BACOVA_01714	0.26	-1.8
139,317	+		BACOVA_01714	0.26	-1.2
139,317	+		BACOVA_01714	0.26	-3.3
139,317	+		BACOVA_01714	0.26	-3.4
139,326	+		BACOVA_01714	0.27	-1.3
139,360	-		BACOVA_01714	0.29	+0.8
139,448	+		BACOVA_01714	0.34	-0.2
139,451	+		BACOVA_01714	0.34	-0.6
139,473	-		BACOVA_01714	0.36	+1.2
139,519	-		BACOVA_01714	0.38	-0.6
139,519	-		BACOVA_01714	0.38	-0.2
139,519	-		BACOVA_01714	0.38	-0.2
139,650	+		BACOVA_01714	0.46	-1.9
139,650	+		BACOVA_01714	0.46	+0.1
139,721	+		BACOVA_01714	0.50	-1.8
139,725	-		BACOVA_01714	0.50	-0.8
139,770	+		BACOVA_01714	0.53	-2.0
139,884	-		BACOVA_01714	0.60	-1.2
139,891	+		BACOVA_01714	0.60	-1.4
139,900	-		BACOVA_01714	0.61	-0.2
140,017	+		BACOVA_01714	0.68	-4.1
140,018	-		BACOVA_01714	0.68	-1.7
140,045	+		BACOVA_01714	0.69	-0.8
140,049	-		BACOVA_01714	0.70	-1.4
140,049	-		BACOVA_01714	0.70	-2.9
140,051	-		BACOVA_01714	0.70	-1.2
140,119	-		BACOVA_01714	0.74	-1.7
140,139	+		BACOVA_01714	0.75	-0.9
140,164	-		BACOVA_01714	0.76	-1.6
140,182	-		BACOVA_01714	0.77	+0.4
140,185	+		BACOVA_01714	0.78	-1.8
140,185	+		BACOVA_01714	0.78	-1.6
140,186	-		BACOVA_01714	0.78	-1.9
140,190	+		BACOVA_01714	0.78	-1.6
140,217	-		BACOVA_01714	0.79	-2.6
140,234	-		BACOVA_01714	0.80	-1.2
140,261	+		BACOVA_01714	0.82	-2.5
140,262	-		BACOVA_01714	0.82	-1.6
140,262	-		BACOVA_01714	0.82	-0.6
140,262	-		BACOVA_01714	0.82	-2.0
140,262	-		BACOVA_01714	0.82	-1.2
140,262	-		BACOVA_01714	0.82	-0.8
140,264	-		BACOVA_01714	0.82	-0.5
140,264	-		BACOVA_01714	0.82	-1.9
140,266	-		BACOVA_01714	0.82	-1.6
140,281	+		BACOVA_01714	0.83	-1.8
140,281	+		BACOVA_01714	0.83	-1.6
140,282	-		BACOVA_01714	0.83	-1.9
140,282	-		BACOVA_01714	0.83	-1.7
140,295	+		BACOVA_01714	0.84	+0.2
140,417	+				-1.4
140,418	-				-1.6
140,464	+				-2.6
140,508	-				-0.8
140,510	+				-2.0
140,552	-				-0.8
140,554	-				-0.6
140,572	-				-1.6
140,580	+				+0.8
140,589	-				-1.2
140,625	+				-2.7
140,625	+				-2.0
140,628	+				-2.0
140,628	+				-2.8
140,651	-				-0.8
140,730	-		BACOVA_01715	0.12	+2.1
140,736	+		BACOVA_01715	0.13	-2.6
140,805	+		BACOVA_01715	0.19	-1.4
140,809	+		BACOVA_01715	0.19	-1.6
140,809	+		BACOVA_01715	0.19	-1.8
140,809	+		BACOVA_01715	0.19	-2.1
140,855	-		BACOVA_01715	0.23	-1.4
140,901	-		BACOVA_01715	0.27	+0.8
140,901	-		BACOVA_01715	0.27	-2.6
140,949	+		BACOVA_01715	0.31	-2.0
141,018	+		BACOVA_01715	0.38	-2.0
141,024	+		BACOVA_01715	0.38	-1.7
141,039	+		BACOVA_01715	0.39	-0.8
141,039	+		BACOVA_01715	0.39	-2.5
141,044	+		BACOVA_01715	0.40	-0.2
141,059	+		BACOVA_01715	0.41	-1.0
141,059	+		BACOVA_01715	0.41	-0.5
141,059	+		BACOVA_01715	0.41	-2.8
141,060	-		BACOVA_01715	0.41	-0.2
141,064	+		BACOVA_01715	0.42	-1.0
141,064	+		BACOVA_01715	0.42	-1.8
141,065	-		BACOVA_01715	0.42	+0.8
141,065	-		BACOVA_01715	0.42	+0.3
141,065	-		BACOVA_01715	0.42	+0.0
141,126	+		BACOVA_01715	0.47	-2.2
141,127	-		BACOVA_01715	0.47	-2.0
141,151	-		BACOVA_01715	0.49	+0.4
141,161	+		BACOVA_01715	0.50	-1.8
141,165	+		BACOVA_01715	0.50	-2.8
141,305	+		BACOVA_01715	0.63	-0.8
141,305	+		BACOVA_01715	0.63	-2.5
141,305	+		BACOVA_01715	0.63	-2.8
141,306	-		BACOVA_01715	0.63	+0.2
141,423	+		BACOVA_01715	0.73	-2.8
141,445	+		BACOVA_01715	0.75	-2.3
141,453	+		BACOVA_01715	0.76	-1.4
141,454	-		BACOVA_01715	0.76	-2.2
141,454	-		BACOVA_01715	0.76	+0.3
141,455	+		BACOVA_01715	0.76	-2.6
141,455	+		BACOVA_01715	0.76	-1.8
141,456	-		BACOVA_01715	0.76	-2.0
141,456	-		BACOVA_01715	0.76	-3.0
141,484	+		BACOVA_01715	0.78	+0.8
141,498	+		BACOVA_01715	0.80	-1.5
141,499	-		BACOVA_01715	0.80	+0.2
141,532	-		BACOVA_01715	0.83	-2.4
141,556	+		BACOVA_01715	0.85	-4.1
141,557	-		BACOVA_01715	0.85	-2.1
141,557	-		BACOVA_01715	0.85	-2.2
141,557	-		BACOVA_01715	0.85	-2.8