Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05613

Experiment: Pectin from citrus peel; autoclaved 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pectin from citrus peel; autoclaved 2.5 mg/ml (C)
1,130,357	+		BACOVA_05611	0.61	+1.1
1,130,358	-		BACOVA_05611	0.61	-0.6
1,130,368	-		BACOVA_05611	0.62	-1.0
1,130,385	+		BACOVA_05611	0.63	+1.5
1,130,508	-		BACOVA_05611	0.72	-1.0
1,130,508	-		BACOVA_05611	0.72	-2.0
1,130,509	+		BACOVA_05611	0.72	-0.1
1,130,528	+		BACOVA_05611	0.73	-0.1
1,130,602	+		BACOVA_05611	0.79	-0.4
1,130,666	+		BACOVA_05611	0.83	-0.1
1,130,667	-		BACOVA_05611	0.83	+2.0
1,130,667	-		BACOVA_05611	0.83	-0.3
1,130,667	-		BACOVA_05611	0.83	+0.2
1,130,689	-		BACOVA_05611	0.85	-0.7
1,130,807	+				-2.1
1,130,838	-				-0.3
1,130,853	-				+1.1
1,130,854	+				-1.9
1,130,877	+				+0.7
1,130,906	+				+0.3
1,130,914	+				+0.5
1,130,945	+				-0.5
1,130,971	-				+1.1
1,130,988	-				-1.0
1,130,999	-				-0.1
1,131,004	-				-0.8
1,131,031	-				+1.0
1,131,043	+				+0.7
1,131,043	+				+0.5
1,131,067	-				+1.7
1,131,087	+				-0.7
1,131,088	-				+1.3
1,131,099	-				-1.0
1,131,102	+				-0.5
1,131,103	-				-0.0
1,131,120	+				-0.2
1,131,150	-				-0.1
1,131,152	+				+0.1
1,131,153	-				-0.3
1,131,158	-				+0.7
1,131,158	-				+0.4
1,131,165	-				-0.3
1,131,167	+				+1.5
1,131,168	-				+0.9
1,131,168	-				-0.9
1,131,201	-				+0.2
1,131,270	-		BACOVA_05612	0.49	-1.0
1,131,270	-		BACOVA_05612	0.49	+0.1
1,131,302	+		BACOVA_05612	0.68	-0.9
1,131,305	+		BACOVA_05612	0.70	-0.6
1,131,306	-		BACOVA_05612	0.71	-0.0
1,131,313	-		BACOVA_05612	0.75	-0.6
1,131,333	+		BACOVA_05612	0.87	-0.2
1,131,386	-				+1.0
1,131,429	-				-0.1
1,131,434	+				+1.4
1,131,435	-				+1.1
1,131,453	+				-0.3
1,131,454	-				-0.4
1,131,454	-				+0.7
1,131,485	+				-0.7
1,131,486	-				-0.1
1,131,510	+				-0.8
1,131,514	-				+0.7
1,131,611	+		BACOVA_05613	0.14	+1.1
1,131,612	-		BACOVA_05613	0.14	+0.1
1,131,646	+		BACOVA_05613	0.15	-0.5
1,131,646	+		BACOVA_05613	0.15	-0.9
1,131,647	-		BACOVA_05613	0.15	+0.3
1,131,714	-		BACOVA_05613	0.19	-0.6
1,131,721	-		BACOVA_05613	0.19	-0.4
1,131,724	-		BACOVA_05613	0.19	+1.2
1,131,726	-		BACOVA_05613	0.20	+0.4
1,131,737	+		BACOVA_05613	0.20	-1.3
1,131,738	-		BACOVA_05613	0.20	+1.7
1,131,758	-		BACOVA_05613	0.21	+0.9
1,131,781	+		BACOVA_05613	0.22	-0.7
1,131,870	+		BACOVA_05613	0.27	+0.0
1,131,900	+		BACOVA_05613	0.29	-0.5
1,131,936	-		BACOVA_05613	0.31	-0.0
1,131,942	+		BACOVA_05613	0.31	-2.3
1,132,047	+		BACOVA_05613	0.36	-1.6
1,132,047	+		BACOVA_05613	0.36	-1.1
1,132,048	-		BACOVA_05613	0.36	-0.1
1,132,048	-		BACOVA_05613	0.36	-1.9
1,132,048	-		BACOVA_05613	0.36	-0.5
1,132,069	+		BACOVA_05613	0.38	-0.6
1,132,070	-		BACOVA_05613	0.38	-0.9
1,132,100	-		BACOVA_05613	0.39	+0.4
1,132,100	-		BACOVA_05613	0.39	+0.1
1,132,167	+		BACOVA_05613	0.43	+0.3
1,132,170	-		BACOVA_05613	0.43	-0.2
1,132,203	+		BACOVA_05613	0.45	-0.2
1,132,203	+		BACOVA_05613	0.45	+1.0
1,132,210	-		BACOVA_05613	0.45	+0.7
1,132,230	+		BACOVA_05613	0.46	+0.9
1,132,231	-		BACOVA_05613	0.46	+1.3
1,132,233	-		BACOVA_05613	0.46	-1.4
1,132,236	+		BACOVA_05613	0.46	+1.2
1,132,236	+		BACOVA_05613	0.46	+1.2
1,132,283	-		BACOVA_05613	0.49	-0.2
1,132,302	+		BACOVA_05613	0.50	+1.0
1,132,306	+		BACOVA_05613	0.50	+1.5
1,132,349	+		BACOVA_05613	0.52	+0.3
1,132,399	-		BACOVA_05613	0.55	+0.2
1,132,423	-		BACOVA_05613	0.56	-0.2
1,132,458	+		BACOVA_05613	0.58	+1.0
1,132,460	+		BACOVA_05613	0.58	+0.7
1,132,463	+		BACOVA_05613	0.58	-1.3
1,132,481	+		BACOVA_05613	0.59	+2.1
1,132,481	+		BACOVA_05613	0.59	-0.9
1,132,618	+		BACOVA_05613	0.66	+1.0
1,132,645	-		BACOVA_05613	0.68	+1.4
1,132,646	+		BACOVA_05613	0.68	-0.9
1,132,672	-		BACOVA_05613	0.69	+0.6
1,132,674	-		BACOVA_05613	0.69	-0.1
1,132,678	+		BACOVA_05613	0.69	-0.8
1,132,678	+		BACOVA_05613	0.69	+0.5
1,132,678	+		BACOVA_05613	0.69	-0.1
1,132,681	-		BACOVA_05613	0.69	-0.1
1,132,726	-		BACOVA_05613	0.72	-0.3
1,132,800	-		BACOVA_05613	0.76	-1.1
1,132,858	-		BACOVA_05613	0.79	+0.7
1,132,858	-		BACOVA_05613	0.79	-0.4
1,132,863	+		BACOVA_05613	0.79	+0.5
1,132,895	+		BACOVA_05613	0.81	+0.1
1,132,896	-		BACOVA_05613	0.81	+0.7
1,132,896	-		BACOVA_05613	0.81	+0.7
1,132,909	+		BACOVA_05613	0.81	+0.5
1,132,957	+		BACOVA_05613	0.84	+0.3
1,132,973	+		BACOVA_05613	0.85	-1.9
1,132,973	+		BACOVA_05613	0.85	+0.7
1,132,974	-		BACOVA_05613	0.85	+0.9
1,133,017	-		BACOVA_05613	0.87	-0.9
1,133,017	-		BACOVA_05613	0.87	+0.3
1,133,018	+		BACOVA_05613	0.87	+0.5
1,133,019	-		BACOVA_05613	0.87	+0.2
1,133,019	-		BACOVA_05613	0.87	+0.2
1,133,024	-		BACOVA_05613	0.87	-0.0
1,133,024	-		BACOVA_05613	0.87	+1.9
1,133,027	+		BACOVA_05613	0.88	+0.2
1,133,028	-		BACOVA_05613	0.88	-1.4
1,133,048	+		BACOVA_05613	0.89	+0.0
1,133,146	+				+0.3
1,133,200	+				-1.2
1,133,210	-				-1.1
1,133,216	-				+0.2
1,133,232	-				-0.3
1,133,255	-				-0.7
1,133,258	-				+0.4
1,133,298	+				-1.1
1,133,307	+				-1.3
1,133,308	-				-0.6
1,133,308	-				+0.1
1,133,355	+				-0.1
1,133,364	+				+0.4
1,133,380	+				+1.1
1,133,381	-				+0.5
1,133,383	+				+0.5
1,133,383	+				+0.0
1,133,384	-				+0.2
1,133,384	-				+1.1
1,133,407	-				-0.1
1,133,443	+				-0.3
1,133,447	+				-0.1
1,133,483	-				+0.8
1,133,498	-				+0.4
1,133,509	-				+0.1
1,133,516	+				+1.4
1,133,517	-				-0.1
1,133,552	-				-0.5
1,133,564	+				+1.1
1,133,576	+				+1.1
1,133,577	-				-0.1
1,133,578	+				-0.3
1,133,585	-				+0.1
1,133,585	-				-0.3
1,133,585	-				-0.8
1,133,585	-				+0.7
1,133,585	-				-0.5
1,133,602	+				-1.3
1,133,675	+				+1.7
1,133,676	-				-0.6
1,133,682	-				-0.3
1,133,689	-				-0.3
1,133,689	-				-0.4
1,133,698	-				-0.3
1,133,789	+		BACOVA_05614	0.12	+1.0
1,133,791	+		BACOVA_05614	0.12	+0.5
1,133,791	+		BACOVA_05614	0.12	+1.7
1,133,792	-		BACOVA_05614	0.12	+0.4
1,133,795	+		BACOVA_05614	0.12	-0.7
1,133,795	+		BACOVA_05614	0.12	+0.7
1,133,795	+		BACOVA_05614	0.12	-0.8
1,133,795	+		BACOVA_05614	0.12	+0.3
1,133,830	+		BACOVA_05614	0.13	-0.3
1,133,831	-		BACOVA_05614	0.13	+0.3
1,133,852	+		BACOVA_05614	0.13	+0.4
1,133,853	-		BACOVA_05614	0.13	-0.3
1,133,853	-		BACOVA_05614	0.13	+0.3
1,133,855	+		BACOVA_05614	0.13	-0.3
1,133,856	-		BACOVA_05614	0.13	+2.1
1,134,023	-		BACOVA_05614	0.17	+0.5
1,134,062	+		BACOVA_05614	0.18	-1.0
1,134,063	-		BACOVA_05614	0.18	-0.0
1,134,065	+		BACOVA_05614	0.18	-0.7
1,134,065	+		BACOVA_05614	0.18	-3.1
1,134,066	-		BACOVA_05614	0.18	-0.1
1,134,066	-		BACOVA_05614	0.18	+0.1
1,134,074	+		BACOVA_05614	0.19	-0.3
1,134,119	+		BACOVA_05614	0.20	-0.0
1,134,119	+		BACOVA_05614	0.20	+1.7
1,134,120	-		BACOVA_05614	0.20	+0.7
1,134,136	+		BACOVA_05614	0.20	-0.1
1,134,137	-		BACOVA_05614	0.20	+0.8
1,134,168	+		BACOVA_05614	0.21	+0.8
1,134,191	+		BACOVA_05614	0.21	+0.8
1,134,192	-		BACOVA_05614	0.21	+1.0
1,134,256	+		BACOVA_05614	0.23	-1.6
1,134,256	+		BACOVA_05614	0.23	-0.3
1,134,257	-		BACOVA_05614	0.23	+0.3
1,134,257	-		BACOVA_05614	0.23	+0.5
1,134,257	-		BACOVA_05614	0.23	+1.1