Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00713

Experiment: Mucin from porcine stomach type II 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00712 and BACOVA_00713 are separated by 94 nucleotides BACOVA_00712: BACOVA_00712 - hypothetical protein, at 83,738 to 85,300 _00712 BACOVA_00713: BACOVA_00713 - hypothetical protein, at 85,395 to 85,769 _00713 Position (kb) 85 86Strain fitness (log2 ratio) -2 -1 0 1at 84.451 kb on + strand, within BACOVA_00712at 84.451 kb on + strand, within BACOVA_00712at 84.452 kb on - strand, within BACOVA_00712at 84.452 kb on - strand, within BACOVA_00712at 84.472 kb on + strand, within BACOVA_00712at 84.473 kb on - strand, within BACOVA_00712at 84.496 kb on + strand, within BACOVA_00712at 84.515 kb on + strand, within BACOVA_00712at 84.516 kb on - strand, within BACOVA_00712at 84.584 kb on - strand, within BACOVA_00712at 84.589 kb on + strand, within BACOVA_00712at 84.610 kb on - strand, within BACOVA_00712at 84.630 kb on + strand, within BACOVA_00712at 84.630 kb on + strand, within BACOVA_00712at 84.630 kb on + strand, within BACOVA_00712at 84.632 kb on + strand, within BACOVA_00712at 84.633 kb on - strand, within BACOVA_00712at 84.633 kb on - strand, within BACOVA_00712at 84.633 kb on - strand, within BACOVA_00712at 84.633 kb on - strand, within BACOVA_00712at 84.634 kb on + strand, within BACOVA_00712at 84.634 kb on + strand, within BACOVA_00712at 84.635 kb on - strand, within BACOVA_00712at 84.670 kb on + strand, within BACOVA_00712at 84.699 kb on + strand, within BACOVA_00712at 84.710 kb on - strand, within BACOVA_00712at 84.712 kb on + strand, within BACOVA_00712at 84.712 kb on + strand, within BACOVA_00712at 84.751 kb on - strand, within BACOVA_00712at 84.763 kb on + strand, within BACOVA_00712at 84.789 kb on + strand, within BACOVA_00712at 84.826 kb on + strand, within BACOVA_00712at 84.827 kb on - strand, within BACOVA_00712at 84.833 kb on - strand, within BACOVA_00712at 84.841 kb on + strand, within BACOVA_00712at 84.842 kb on - strand, within BACOVA_00712at 84.852 kb on - strand, within BACOVA_00712at 84.852 kb on - strand, within BACOVA_00712at 84.863 kb on - strand, within BACOVA_00712at 84.870 kb on + strand, within BACOVA_00712at 84.883 kb on + strand, within BACOVA_00712at 84.883 kb on + strand, within BACOVA_00712at 84.884 kb on - strand, within BACOVA_00712at 84.887 kb on + strand, within BACOVA_00712at 84.887 kb on + strand, within BACOVA_00712at 84.888 kb on - strand, within BACOVA_00712at 84.906 kb on - strand, within BACOVA_00712at 84.908 kb on + strand, within BACOVA_00712at 84.909 kb on - strand, within BACOVA_00712at 84.910 kb on + strand, within BACOVA_00712at 84.910 kb on + strand, within BACOVA_00712at 84.911 kb on - strand, within BACOVA_00712at 84.911 kb on - strand, within BACOVA_00712at 84.911 kb on - strand, within BACOVA_00712at 84.959 kb on - strand, within BACOVA_00712at 84.973 kb on + strand, within BACOVA_00712at 84.988 kb on + strand, within BACOVA_00712at 85.033 kb on + strand, within BACOVA_00712at 85.034 kb on - strand, within BACOVA_00712at 85.036 kb on + strand, within BACOVA_00712at 85.039 kb on + strand, within BACOVA_00712at 85.046 kb on + strand, within BACOVA_00712at 85.079 kb on - strand, within BACOVA_00712at 85.079 kb on - strand, within BACOVA_00712at 85.082 kb on - strand, within BACOVA_00712at 85.082 kb on - strand, within BACOVA_00712at 85.085 kb on - strand, within BACOVA_00712at 85.138 kb on + strand, within BACOVA_00712at 85.138 kb on + strand, within BACOVA_00712at 85.139 kb on - strand, within BACOVA_00712at 85.144 kb on + strandat 85.144 kb on + strandat 85.145 kb on - strandat 85.147 kb on + strandat 85.148 kb on - strandat 85.153 kb on + strandat 85.205 kb on - strandat 85.209 kb on + strandat 85.210 kb on - strandat 85.301 kb on + strandat 85.302 kb on - strandat 85.305 kb on + strandat 85.306 kb on - strandat 85.307 kb on + strandat 85.308 kb on - strandat 85.313 kb on - strandat 85.317 kb on - strandat 85.317 kb on - strandat 85.317 kb on - strandat 85.319 kb on - strandat 85.325 kb on - strandat 85.325 kb on - strandat 85.351 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Mucin from porcine stomach type II 2.5 mg/ml (C)
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84,451 + BACOVA_00712 0.46 -2.2
84,451 + BACOVA_00712 0.46 -0.3
84,452 - BACOVA_00712 0.46 +1.6
84,452 - BACOVA_00712 0.46 +0.3
84,472 + BACOVA_00712 0.47 -0.1
84,473 - BACOVA_00712 0.47 +0.0
84,496 + BACOVA_00712 0.48 -0.8
84,515 + BACOVA_00712 0.50 -0.6
84,516 - BACOVA_00712 0.50 +1.2
84,584 - BACOVA_00712 0.54 +1.7
84,589 + BACOVA_00712 0.54 +0.6
84,610 - BACOVA_00712 0.56 +0.5
84,630 + BACOVA_00712 0.57 +0.0
84,630 + BACOVA_00712 0.57 +0.9
84,630 + BACOVA_00712 0.57 -2.0
84,632 + BACOVA_00712 0.57 +1.2
84,633 - BACOVA_00712 0.57 +0.6
84,633 - BACOVA_00712 0.57 +1.2
84,633 - BACOVA_00712 0.57 -0.9
84,633 - BACOVA_00712 0.57 -1.5
84,634 + BACOVA_00712 0.57 +0.5
84,634 + BACOVA_00712 0.57 -0.3
84,635 - BACOVA_00712 0.57 +1.0
84,670 + BACOVA_00712 0.60 -1.0
84,699 + BACOVA_00712 0.61 -0.8
84,710 - BACOVA_00712 0.62 +0.9
84,712 + BACOVA_00712 0.62 -0.2
84,712 + BACOVA_00712 0.62 -1.0
84,751 - BACOVA_00712 0.65 +1.2
84,763 + BACOVA_00712 0.66 -1.3
84,789 + BACOVA_00712 0.67 +1.0
84,826 + BACOVA_00712 0.70 -0.8
84,827 - BACOVA_00712 0.70 -0.9
84,833 - BACOVA_00712 0.70 -0.2
84,841 + BACOVA_00712 0.71 -0.0
84,842 - BACOVA_00712 0.71 +0.3
84,852 - BACOVA_00712 0.71 -0.3
84,852 - BACOVA_00712 0.71 -1.5
84,863 - BACOVA_00712 0.72 -0.9
84,870 + BACOVA_00712 0.72 +0.6
84,883 + BACOVA_00712 0.73 +0.5
84,883 + BACOVA_00712 0.73 -0.1
84,884 - BACOVA_00712 0.73 +0.5
84,887 + BACOVA_00712 0.74 -1.6
84,887 + BACOVA_00712 0.74 +0.3
84,888 - BACOVA_00712 0.74 +1.4
84,906 - BACOVA_00712 0.75 -1.0
84,908 + BACOVA_00712 0.75 +0.0
84,909 - BACOVA_00712 0.75 -0.1
84,910 + BACOVA_00712 0.75 -1.3
84,910 + BACOVA_00712 0.75 -0.9
84,911 - BACOVA_00712 0.75 +0.8
84,911 - BACOVA_00712 0.75 -1.1
84,911 - BACOVA_00712 0.75 -0.5
84,959 - BACOVA_00712 0.78 +0.5
84,973 + BACOVA_00712 0.79 -0.2
84,988 + BACOVA_00712 0.80 -0.6
85,033 + BACOVA_00712 0.83 -0.7
85,034 - BACOVA_00712 0.83 +0.3
85,036 + BACOVA_00712 0.83 +0.1
85,039 + BACOVA_00712 0.83 +0.4
85,046 + BACOVA_00712 0.84 +0.7
85,079 - BACOVA_00712 0.86 +0.0
85,079 - BACOVA_00712 0.86 -0.5
85,082 - BACOVA_00712 0.86 -0.2
85,082 - BACOVA_00712 0.86 +0.7
85,085 - BACOVA_00712 0.86 +0.0
85,138 + BACOVA_00712 0.90 -1.5
85,138 + BACOVA_00712 0.90 +0.1
85,139 - BACOVA_00712 0.90 -1.0
85,144 + +0.0
85,144 + -0.8
85,145 - -2.5
85,147 + +0.3
85,148 - +0.4
85,153 + -0.6
85,205 - -0.1
85,209 + +0.4
85,210 - -1.4
85,301 + +0.2
85,302 - +0.4
85,305 + -0.1
85,306 - -0.2
85,307 + -2.2
85,308 - -0.2
85,313 - +0.2
85,317 - -0.7
85,317 - -1.5
85,317 - -0.7
85,319 - -0.5
85,325 - +0.0
85,325 - +1.0
85,351 - -1.0

Or see this region's nucleotide sequence