Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03752

Experiment: amylopectin from maize 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize 2.5 mg/ml (C)
80,880	+		BACOVA_03750	0.47	+0.8
80,881	-		BACOVA_03750	0.47	-0.0
80,885	+		BACOVA_03750	0.47	-0.1
80,918	+		BACOVA_03750	0.49	+1.0
80,923	-		BACOVA_03750	0.50	-0.8
80,935	+		BACOVA_03750	0.51	-2.7
80,989	-		BACOVA_03750	0.54	+1.5
81,200	+		BACOVA_03750	0.70	+0.2
81,209	+		BACOVA_03750	0.71	-2.2
81,209	+		BACOVA_03750	0.71	-1.9
81,213	+		BACOVA_03750	0.71	-1.5
81,214	-		BACOVA_03750	0.71	-2.1
81,220	+		BACOVA_03750	0.71	-0.4
81,313	-		BACOVA_03750	0.78	+0.8
81,425	+		BACOVA_03750	0.86	-1.6
81,446	-		BACOVA_03750	0.88	+0.6
81,516	+				+3.4
81,516	+				+2.4
81,517	-				+0.6
81,559	+				+2.3
81,559	+				+1.6
81,660	-				-1.0
81,678	+				-3.1
81,682	-		BACOVA_03751	0.13	-1.6
81,689	+		BACOVA_03751	0.19	+0.6
81,729	+		BACOVA_03751	0.56	-0.1
81,785	+				-1.3
81,792	-				+0.2
81,811	-				-2.3
81,814	+				-1.3
81,814	+				+3.2
81,814	+				-1.1
81,814	+				+1.4
81,815	-				+2.8
81,815	-				+3.1
81,815	-				-0.2
81,816	+				+2.5
81,816	+				-0.4
81,817	-				-0.2
81,835	-				+1.1
81,876	+				-1.5
81,888	+				-0.6
81,888	+				-0.1
81,888	+				+1.6
81,927	+				-1.0
81,928	-				-2.2
81,931	+				-0.6
81,932	-				+2.2
81,968	-				-1.4
82,035	-				+0.2
82,080	+				+0.6
82,179	+		BACOVA_03752	0.12	-1.6
82,194	+		BACOVA_03752	0.13	-1.6
82,239	+		BACOVA_03752	0.14	-2.4
82,279	-		BACOVA_03752	0.15	+1.0
82,349	+		BACOVA_03752	0.18	+0.4
82,480	-		BACOVA_03752	0.22	-1.2
82,498	-		BACOVA_03752	0.22	-0.2
82,554	+		BACOVA_03752	0.24	-0.9
82,572	+		BACOVA_03752	0.24	-1.0
82,597	+		BACOVA_03752	0.25	-0.5
82,645	+		BACOVA_03752	0.27	+1.8
82,673	-		BACOVA_03752	0.28	-1.1
82,673	-		BACOVA_03752	0.28	-1.2
82,674	+		BACOVA_03752	0.28	-0.7
82,674	+		BACOVA_03752	0.28	+0.6
82,675	-		BACOVA_03752	0.28	+1.2
82,675	-		BACOVA_03752	0.28	+0.2
82,679	+		BACOVA_03752	0.28	-0.1
82,754	-		BACOVA_03752	0.30	-0.5
82,774	+		BACOVA_03752	0.31	-0.5
82,779	+		BACOVA_03752	0.31	+1.9
82,780	-		BACOVA_03752	0.31	+0.4
82,780	-		BACOVA_03752	0.31	-2.2
82,780	-		BACOVA_03752	0.31	+0.9
82,883	-		BACOVA_03752	0.34	-1.8
82,995	+		BACOVA_03752	0.38	-0.8
82,996	-		BACOVA_03752	0.38	-0.2
82,996	-		BACOVA_03752	0.38	-0.4
83,001	+		BACOVA_03752	0.38	-1.4
83,020	+		BACOVA_03752	0.38	+0.5
83,020	+		BACOVA_03752	0.38	-0.2
83,025	+		BACOVA_03752	0.38	-0.2
83,025	+		BACOVA_03752	0.38	-0.1
83,086	+		BACOVA_03752	0.40	-0.7
83,087	-		BACOVA_03752	0.40	-1.5
83,087	-		BACOVA_03752	0.40	-1.8
83,122	-		BACOVA_03752	0.41	-0.8
83,173	-		BACOVA_03752	0.43	-1.2
83,204	+		BACOVA_03752	0.44	-2.0
83,204	+		BACOVA_03752	0.44	+2.6
83,314	+		BACOVA_03752	0.47	+0.2
83,328	+		BACOVA_03752	0.48	-2.7
83,328	+		BACOVA_03752	0.48	-1.8
83,328	+		BACOVA_03752	0.48	-2.4
83,359	+		BACOVA_03752	0.49	-0.5
83,373	+		BACOVA_03752	0.49	-1.2
83,374	-		BACOVA_03752	0.49	+0.6
83,374	-		BACOVA_03752	0.49	-0.8
83,379	-		BACOVA_03752	0.49	-1.3
83,384	+		BACOVA_03752	0.50	+0.4
83,384	+		BACOVA_03752	0.50	-0.7
83,419	-		BACOVA_03752	0.51	-2.1
83,419	-		BACOVA_03752	0.51	-0.3
83,474	+		BACOVA_03752	0.52	+1.1
83,498	-		BACOVA_03752	0.53	+2.8
83,610	+		BACOVA_03752	0.57	+1.9
83,611	-		BACOVA_03752	0.57	-0.2
83,644	+		BACOVA_03752	0.58	-0.4
83,673	+		BACOVA_03752	0.59	-1.6
83,736	+		BACOVA_03752	0.60	-1.6
83,742	+		BACOVA_03752	0.61	+0.6
83,766	+		BACOVA_03752	0.61	-1.7
83,782	-		BACOVA_03752	0.62	-1.8
83,829	+		BACOVA_03752	0.63	+0.3
83,848	-		BACOVA_03752	0.64	-0.4
83,917	-		BACOVA_03752	0.66	+1.3
83,935	-		BACOVA_03752	0.67	+0.6
83,959	-		BACOVA_03752	0.67	-1.2
83,959	-		BACOVA_03752	0.67	-2.4
83,963	-		BACOVA_03752	0.68	-3.0
83,969	+		BACOVA_03752	0.68	+1.9
84,127	+		BACOVA_03752	0.73	+0.6
84,170	+		BACOVA_03752	0.74	+1.2
84,170	+		BACOVA_03752	0.74	-0.4
84,171	+		BACOVA_03752	0.74	-1.6
84,171	-		BACOVA_03752	0.74	+0.2
84,175	+		BACOVA_03752	0.74	-0.7
84,176	-		BACOVA_03752	0.74	-0.1
84,213	+		BACOVA_03752	0.75	-1.5
84,217	+		BACOVA_03752	0.75	+0.6
84,217	+		BACOVA_03752	0.75	-2.8
84,217	+		BACOVA_03752	0.75	-0.7
84,217	+		BACOVA_03752	0.75	+0.1
84,217	+		BACOVA_03752	0.75	-1.0
84,237	+		BACOVA_03752	0.76	+0.8
84,237	+		BACOVA_03752	0.76	-1.4
84,238	-		BACOVA_03752	0.76	-1.7
84,242	+		BACOVA_03752	0.76	+1.6
84,339	+		BACOVA_03752	0.79	-0.6
84,361	+		BACOVA_03752	0.80	+2.4
84,371	+		BACOVA_03752	0.80	+0.6
84,371	+		BACOVA_03752	0.80	-0.6
84,372	-		BACOVA_03752	0.80	+0.8
84,410	-		BACOVA_03752	0.81	-1.5
84,412	+		BACOVA_03752	0.81	-0.6
84,504	-		BACOVA_03752	0.84	-0.1
84,520	+		BACOVA_03752	0.85	-0.8
84,616	-		BACOVA_03752	0.88	-0.6
84,687	-		BACOVA_03752	0.90	-0.1
84,711	-				+0.6
84,711	-				+0.0
84,759	+				+0.2
84,759	+				-2.8
84,760	-				+0.2
84,760	-				-1.0
84,760	-				+0.6
84,762	+				+0.6
84,762	+				-0.5
84,825	-				+0.2
84,862	-				+0.4
84,862	-				-0.6
84,879	+				+0.9
84,880	-				-1.2
84,916	-				-0.7
84,916	-				+1.2
84,935	+				-0.2
84,983	-				-0.0
84,988	+				+0.0
84,989	-				-0.5
85,184	+		BACOVA_03753	0.15	-1.6
85,187	+		BACOVA_03753	0.15	-1.4
85,187	+		BACOVA_03753	0.15	+1.8
85,187	+		BACOVA_03753	0.15	-2.6
85,187	+		BACOVA_03753	0.15	+0.1
85,187	+		BACOVA_03753	0.15	+0.2
85,187	+		BACOVA_03753	0.15	-1.5
85,187	+		BACOVA_03753	0.15	-1.1
85,188	-		BACOVA_03753	0.15	+1.4
85,240	-		BACOVA_03753	0.20	-2.6
85,245	-		BACOVA_03753	0.20	+1.2
85,265	+		BACOVA_03753	0.22	-0.1
85,289	-		BACOVA_03753	0.24	-0.5
85,380	-		BACOVA_03753	0.32	+0.6
85,435	-		BACOVA_03753	0.37	+1.9
85,465	+		BACOVA_03753	0.39	+0.1
85,491	+		BACOVA_03753	0.42	-0.7
85,492	-		BACOVA_03753	0.42	+0.9
85,496	+		BACOVA_03753	0.42	+0.5
85,497	-		BACOVA_03753	0.42	-1.9
85,497	-		BACOVA_03753	0.42	-1.4
85,520	+		BACOVA_03753	0.44	+0.2
85,520	+		BACOVA_03753	0.44	-0.6
85,521	-		BACOVA_03753	0.44	-1.0
85,559	+		BACOVA_03753	0.48	+1.2
85,648	+		BACOVA_03753	0.55	-0.0
85,656	-		BACOVA_03753	0.56	+0.5
85,671	+		BACOVA_03753	0.57	+1.3
85,680	+		BACOVA_03753	0.58	+2.4
85,681	-		BACOVA_03753	0.58	-0.1
85,684	+		BACOVA_03753	0.58	+0.4
85,684	+		BACOVA_03753	0.58	-1.3
85,685	-		BACOVA_03753	0.59	-1.4
85,685	-		BACOVA_03753	0.59	+0.3
85,699	+		BACOVA_03753	0.60	-0.8
85,778	+		BACOVA_03753	0.67	-1.4
85,870	+		BACOVA_03753	0.75	+1.3
85,870	+		BACOVA_03753	0.75	-0.8
85,870	+		BACOVA_03753	0.75	+0.0
85,877	-		BACOVA_03753	0.75	-0.1
85,882	+		BACOVA_03753	0.76	+0.0
85,959	-		BACOVA_03753	0.82	+1.2
85,959	-		BACOVA_03753	0.82	-1.3
85,980	-		BACOVA_03753	0.84	-1.2
85,998	-		BACOVA_03753	0.86	+0.2