Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03676

Experiment: amylopectin from maize 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize 2.5 mg/ml (C)
1,755	+				+0.6
1,827	+				+1.2
1,873	-		BACOVA_03675	0.13	+2.0
1,879	+		BACOVA_03675	0.14	+4.0
1,879	+		BACOVA_03675	0.14	+1.9
1,879	+		BACOVA_03675	0.14	-0.4
1,886	+		BACOVA_03675	0.15	-1.1
1,889	-		BACOVA_03675	0.15	+3.3
1,907	+		BACOVA_03675	0.17	+1.2
1,907	+		BACOVA_03675	0.17	+0.5
1,907	+		BACOVA_03675	0.17	-0.4
1,918	-		BACOVA_03675	0.18	-0.1
1,933	+		BACOVA_03675	0.19	+1.7
1,939	-		BACOVA_03675	0.20	+3.2
1,942	+		BACOVA_03675	0.20	-0.1
1,943	-		BACOVA_03675	0.21	-1.1
1,989	-		BACOVA_03675	0.25	+1.2
2,014	-		BACOVA_03675	0.28	+3.6
2,066	-		BACOVA_03675	0.33	+1.8
2,066	-		BACOVA_03675	0.33	+2.6
2,078	+		BACOVA_03675	0.34	+1.5
2,083	-		BACOVA_03675	0.35	+2.6
2,083	-		BACOVA_03675	0.35	+1.6
2,120	+		BACOVA_03675	0.39	+0.6
2,120	+		BACOVA_03675	0.39	+1.2
2,121	-		BACOVA_03675	0.39	-1.0
2,126	-		BACOVA_03675	0.39	+0.5
2,130	-		BACOVA_03675	0.40	+1.2
2,130	-		BACOVA_03675	0.40	+0.2
2,144	+		BACOVA_03675	0.41	-1.8
2,220	+		BACOVA_03675	0.49	-1.2
2,220	+		BACOVA_03675	0.49	+0.6
2,249	+		BACOVA_03675	0.52	+0.2
2,259	-		BACOVA_03675	0.53	-0.1
2,323	-		BACOVA_03675	0.59	+1.2
2,338	-		BACOVA_03675	0.61	+2.9
2,423	+		BACOVA_03675	0.70	-0.1
2,430	-		BACOVA_03675	0.70	+1.0
2,462	-		BACOVA_03675	0.74	+0.6
2,489	+		BACOVA_03675	0.77	-0.1
2,532	-		BACOVA_03675	0.81	+0.2
2,534	-		BACOVA_03675	0.81	-0.1
2,581	-		BACOVA_03675	0.86	+1.2
2,585	+		BACOVA_03675	0.86	+4.1
2,589	-		BACOVA_03675	0.87	+0.6
2,658	-				+4.2
2,671	+				+1.5
2,686	+				-0.1
2,686	+				+2.5
2,690	+				-1.6
2,691	-				+1.0
2,691	-				+3.6
2,722	+				+2.2
2,851	-		BACOVA_03676	0.11	-0.4
2,857	+		BACOVA_03676	0.11	-0.4
2,876	+		BACOVA_03676	0.13	-0.4
2,877	-		BACOVA_03676	0.13	+1.2
2,993	+		BACOVA_03676	0.24	+2.0
2,993	+		BACOVA_03676	0.24	+0.2
2,994	-		BACOVA_03676	0.24	+0.9
2,999	-		BACOVA_03676	0.24	-1.0
3,064	+		BACOVA_03676	0.30	-0.1
3,070	+		BACOVA_03676	0.30	+0.2
3,070	+		BACOVA_03676	0.30	+0.8
3,070	+		BACOVA_03676	0.30	+0.9
3,072	+		BACOVA_03676	0.31	+0.6
3,072	+		BACOVA_03676	0.31	+0.8
3,075	+		BACOVA_03676	0.31	-0.1
3,076	-		BACOVA_03676	0.31	-1.8
3,150	+		BACOVA_03676	0.38	-2.1
3,159	+		BACOVA_03676	0.38	+1.2
3,201	+		BACOVA_03676	0.42	+1.2
3,202	-		BACOVA_03676	0.42	+0.2
3,204	-		BACOVA_03676	0.43	-0.1
3,216	+		BACOVA_03676	0.44	+0.6
3,266	-		BACOVA_03676	0.48	+0.4
3,271	+		BACOVA_03676	0.49	+1.8
3,272	-		BACOVA_03676	0.49	-1.2
3,275	+		BACOVA_03676	0.49	+0.0
3,276	-		BACOVA_03676	0.49	+0.6
3,387	-		BACOVA_03676	0.59	+0.2
3,390	+		BACOVA_03676	0.59	-0.5
3,390	+		BACOVA_03676	0.59	-0.1
3,403	+		BACOVA_03676	0.60	+1.6
3,408	-		BACOVA_03676	0.61	-0.8
3,457	+		BACOVA_03676	0.65	+1.2
3,459	+		BACOVA_03676	0.65	+0.6
3,482	-		BACOVA_03676	0.68	+0.2
3,504	+		BACOVA_03676	0.70	-0.6
3,537	+		BACOVA_03676	0.73	-0.6
3,540	+		BACOVA_03676	0.73	+0.5
3,541	-		BACOVA_03676	0.73	-1.1
3,542	+		BACOVA_03676	0.73	-0.8
3,583	+		BACOVA_03676	0.77	+1.2
3,584	-		BACOVA_03676	0.77	+0.8
3,584	-		BACOVA_03676	0.77	-1.2
3,643	+		BACOVA_03676	0.82	+0.2
3,644	-		BACOVA_03676	0.82	+0.2
3,653	+		BACOVA_03676	0.83	-0.8
3,676	+		BACOVA_03676	0.85	+0.1
3,681	+		BACOVA_03676	0.85	+1.0
3,682	-		BACOVA_03676	0.86	-1.0
3,712	-		BACOVA_03676	0.88	+0.2
3,736	+				-0.4
3,737	-				+1.7
3,888	-				+4.7
3,889	+				-0.1
3,898	-		BACOVA_03677	0.10	+1.4
3,925	+		BACOVA_03677	0.15	-1.3
3,938	+		BACOVA_03677	0.18	+1.1
3,939	-		BACOVA_03677	0.18	-1.2
3,939	-		BACOVA_03677	0.18	+1.0
3,939	-		BACOVA_03677	0.18	+0.6
3,939	-		BACOVA_03677	0.18	+1.2
3,941	-		BACOVA_03677	0.18	-0.4
3,941	-		BACOVA_03677	0.18	-1.1
3,970	+		BACOVA_03677	0.24	-0.6
3,978	-		BACOVA_03677	0.25	-1.2
3,978	-		BACOVA_03677	0.25	+0.4
3,995	+		BACOVA_03677	0.29	-1.8
3,996	-		BACOVA_03677	0.29	+2.2
4,033	-		BACOVA_03677	0.36	+2.4
4,079	-		BACOVA_03677	0.45	+0.0
4,091	-		BACOVA_03677	0.47	-0.6
4,130	+		BACOVA_03677	0.54	+1.2
4,131	-		BACOVA_03677	0.54	-0.6
4,131	-		BACOVA_03677	0.54	-1.0
4,133	-		BACOVA_03677	0.55	-2.0
4,225	+		BACOVA_03677	0.72	-0.1
4,225	+		BACOVA_03677	0.72	-0.4
4,225	+		BACOVA_03677	0.72	-1.3
4,226	-		BACOVA_03677	0.73	-1.1
4,226	-		BACOVA_03677	0.73	+0.5
4,258	+		BACOVA_03677	0.79	-0.4
4,269	+		BACOVA_03677	0.81	-0.1
4,269	+		BACOVA_03677	0.81	+0.1
4,270	-		BACOVA_03677	0.81	-1.4
4,273	+		BACOVA_03677	0.82	-1.2
4,274	-		BACOVA_03677	0.82	-0.1
4,316	+		BACOVA_03677	0.90	-0.6
4,316	+		BACOVA_03677	0.90	+0.8
4,318	+				+1.2
4,339	+				+0.4
4,345	-				+1.6
4,346	+				+1.5
4,347	-				-1.4
4,369	+				+0.2
4,372	+				+1.2
4,385	-				+0.6
4,389	-				-0.1
4,439	+				+1.1
4,439	+				-0.4
4,441	+				+1.7
4,443	+				+1.6
4,443	+				-0.1
4,473	-				-0.7
4,475	+				+0.1
4,498	+				+0.2
4,540	+		BACOVA_03678	0.11	+0.6
4,570	+		BACOVA_03678	0.13	-2.1
4,571	-		BACOVA_03678	0.13	-0.1
4,620	-		BACOVA_03678	0.17	+0.6
4,653	+		BACOVA_03678	0.19	+0.2
4,664	+		BACOVA_03678	0.20	+0.4
4,722	+		BACOVA_03678	0.24	+1.2
4,738	+		BACOVA_03678	0.25	+1.6
4,798	+		BACOVA_03678	0.29	+2.6
4,798	+		BACOVA_03678	0.29	+2.0
4,802	-		BACOVA_03678	0.29	+0.6