Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02683

Experiment: amylopectin from maize 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize 2.5 mg/ml (C)
87,603	+		BACOVA_02682	0.38	-0.4
87,603	+		BACOVA_02682	0.38	-1.8
87,603	+		BACOVA_02682	0.38	-2.3
87,604	-		BACOVA_02682	0.38	-0.6
87,654	-		BACOVA_02682	0.41	-2.6
87,654	-		BACOVA_02682	0.41	-0.6
87,657	+		BACOVA_02682	0.41	-1.9
87,657	+		BACOVA_02682	0.41	+0.0
87,658	-		BACOVA_02682	0.41	-1.5
87,658	-		BACOVA_02682	0.41	-1.6
87,658	-		BACOVA_02682	0.41	+1.2
87,663	+		BACOVA_02682	0.41	+4.1
87,678	+		BACOVA_02682	0.42	+0.1
87,678	+		BACOVA_02682	0.42	+1.0
87,679	-		BACOVA_02682	0.42	-0.4
87,693	-		BACOVA_02682	0.43	+3.3
87,695	+		BACOVA_02682	0.43	+0.4
87,696	-		BACOVA_02682	0.44	-1.4
87,701	-		BACOVA_02682	0.44	-0.3
87,715	-		BACOVA_02682	0.45	-2.8
87,727	-		BACOVA_02682	0.46	+0.5
87,731	+		BACOVA_02682	0.46	+1.8
87,731	+		BACOVA_02682	0.46	-0.3
87,732	-		BACOVA_02682	0.46	-1.6
87,732	-		BACOVA_02682	0.46	-0.4
87,757	+		BACOVA_02682	0.47	+0.9
87,790	-		BACOVA_02682	0.50	-1.2
87,795	+		BACOVA_02682	0.50	+0.1
87,795	+		BACOVA_02682	0.50	+0.4
87,796	-		BACOVA_02682	0.50	+0.3
87,796	-		BACOVA_02682	0.50	-0.9
87,796	-		BACOVA_02682	0.50	+2.0
87,828	+		BACOVA_02682	0.52	-1.0
87,828	+		BACOVA_02682	0.52	-2.2
87,852	+		BACOVA_02682	0.53	-1.1
87,853	-		BACOVA_02682	0.54	+0.8
87,862	+		BACOVA_02682	0.54	-1.6
87,863	-		BACOVA_02682	0.54	-1.3
87,863	-		BACOVA_02682	0.54	-0.2
87,870	+		BACOVA_02682	0.55	-1.9
87,902	+		BACOVA_02682	0.57	-0.2
87,959	+		BACOVA_02682	0.60	-1.3
87,960	-		BACOVA_02682	0.60	-0.8
87,996	+		BACOVA_02682	0.63	-0.3
87,997	-		BACOVA_02682	0.63	+0.8
88,018	+		BACOVA_02682	0.64	+0.4
88,019	-		BACOVA_02682	0.64	+1.3
88,019	-		BACOVA_02682	0.64	+0.3
88,062	+		BACOVA_02682	0.67	-1.2
88,068	-		BACOVA_02682	0.67	-0.4
88,081	+		BACOVA_02682	0.68	+1.1
88,174	+		BACOVA_02682	0.74	+0.7
88,286	-		BACOVA_02682	0.81	-0.7
88,343	-		BACOVA_02682	0.85	+2.0
88,366	+		BACOVA_02682	0.86	+0.4
88,366	+		BACOVA_02682	0.86	-0.4
88,367	-		BACOVA_02682	0.86	+0.9
88,389	-		BACOVA_02682	0.88	-0.7
88,503	+				+0.3
88,507	+				-1.2
88,508	-				+0.8
88,554	+				-2.5
88,554	+				-3.1
88,554	+				+0.2
88,554	+				+0.5
88,555	-				-1.4
88,555	-				+0.3
88,555	-				+1.3
88,561	+				-0.6
88,564	+				+0.3
88,591	-				-2.4
88,595	+				-0.1
88,634	+				-1.8
88,634	+				-3.5
88,635	-				-1.7
88,638	-				-1.8
88,644	+				-1.7
88,645	-				+0.1
88,656	-				+0.0
88,727	+		BACOVA_02683	0.14	-2.0
88,727	+		BACOVA_02683	0.14	+0.2
88,728	-		BACOVA_02683	0.15	-0.8
88,755	+		BACOVA_02683	0.17	+0.8
88,774	-		BACOVA_02683	0.19	+1.4
88,802	+		BACOVA_02683	0.22	+0.4
88,802	+		BACOVA_02683	0.22	+1.0
88,802	+		BACOVA_02683	0.22	-1.4
88,803	-		BACOVA_02683	0.22	-0.1
88,803	-		BACOVA_02683	0.22	-0.2
88,803	-		BACOVA_02683	0.22	-0.2
88,803	-		BACOVA_02683	0.22	+0.6
88,803	-		BACOVA_02683	0.22	-0.4
88,804	+		BACOVA_02683	0.22	-0.9
88,804	+		BACOVA_02683	0.22	-1.0
88,804	+		BACOVA_02683	0.22	-0.2
88,804	+		BACOVA_02683	0.22	+0.4
88,804	+		BACOVA_02683	0.22	+2.4
88,804	+		BACOVA_02683	0.22	-1.0
88,805	-		BACOVA_02683	0.22	-0.6
88,805	-		BACOVA_02683	0.22	-1.3
88,877	-		BACOVA_02683	0.29	+1.8
88,877	-		BACOVA_02683	0.29	-2.5
88,921	+		BACOVA_02683	0.34	-0.2
89,010	+		BACOVA_02683	0.43	+1.3
89,099	+		BACOVA_02683	0.51	-1.1
89,147	+		BACOVA_02683	0.56	+0.8
89,148	-		BACOVA_02683	0.56	-0.5
89,153	+		BACOVA_02683	0.57	-1.4
89,153	+		BACOVA_02683	0.57	-1.7
89,154	-		BACOVA_02683	0.57	-0.6
89,239	+		BACOVA_02683	0.65	-0.4
89,240	-		BACOVA_02683	0.65	-0.6
89,243	+		BACOVA_02683	0.66	-1.4
89,295	+		BACOVA_02683	0.71	-1.3
89,314	+		BACOVA_02683	0.73	+0.4
89,320	+		BACOVA_02683	0.73	-0.6
89,380	-		BACOVA_02683	0.79	-1.1
89,382	-		BACOVA_02683	0.79	-0.3
89,382	-		BACOVA_02683	0.79	+1.4
89,382	-		BACOVA_02683	0.79	-0.5
89,388	+		BACOVA_02683	0.80	-0.9
89,458	+		BACOVA_02683	0.87	+2.6
89,470	+		BACOVA_02683	0.88	-0.1
89,477	+		BACOVA_02683	0.89	-1.2
89,478	-		BACOVA_02683	0.89	-1.2
89,537	+				-2.1
89,543	+				-0.6
89,555	+				-0.6
89,556	-				+1.9
89,556	-				+0.1
89,558	-				+0.6
89,562	+				-1.3
89,562	+				-0.2
89,562	+				-0.8
89,563	-				+0.8
89,563	-				+0.7
89,563	-				+3.8
89,563	-				-1.2
89,564	+				+1.1
89,601	+				-0.1
89,613	+				-1.0
89,617	-				+2.4
89,628	+				+2.4
89,629	-				+0.1
89,645	+				+0.8
89,713	-				-1.1
89,758	+		BACOVA_02684	0.17	+0.9
89,758	+		BACOVA_02684	0.17	-2.5
89,799	+		BACOVA_02684	0.24	+1.2
89,799	+		BACOVA_02684	0.24	-0.8
89,800	-		BACOVA_02684	0.25	+0.6
89,800	-		BACOVA_02684	0.25	+1.1
89,800	-		BACOVA_02684	0.25	-0.4
89,801	+		BACOVA_02684	0.25	-1.0
89,802	-		BACOVA_02684	0.25	-0.2
89,809	-		BACOVA_02684	0.26	+1.4
89,809	-		BACOVA_02684	0.26	-0.4
89,855	-		BACOVA_02684	0.34	-0.2
89,882	-		BACOVA_02684	0.39	+0.8
89,934	+		BACOVA_02684	0.48	+0.6
89,935	-		BACOVA_02684	0.48	-2.0
89,946	+		BACOVA_02684	0.50	+0.4
89,947	-		BACOVA_02684	0.50	-1.2
89,947	-		BACOVA_02684	0.50	-1.1
89,986	+		BACOVA_02684	0.57	-2.4
90,037	+		BACOVA_02684	0.65	-2.2
90,037	+		BACOVA_02684	0.65	-1.0
90,038	-		BACOVA_02684	0.65	+0.3
90,067	+		BACOVA_02684	0.70	-1.1
90,253	-				-0.2
90,259	-				-0.9
90,259	-				-2.2
90,263	+				-0.5
90,263	+				+1.9
90,299	-				-1.9
90,343	+				-1.5
90,347	+				+0.8
90,348	-				-0.4
90,348	-				+0.1
90,464	+		BACOVA_02685	0.10	-0.2
90,488	+		BACOVA_02685	0.12	+1.4
90,517	+		BACOVA_02685	0.13	+1.3
90,529	+		BACOVA_02685	0.14	+1.1