Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01468

Experiment: amylopectin from maize 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	amylopectin from maize 2.5 mg/ml (C)
124,743	-				+0.8
124,762	+				-1.6
124,775	+				-0.5
124,775	+				+0.1
124,783	+				+0.9
124,784	-				+1.4
124,787	+				+3.4
124,787	+				+0.4
124,788	-				+0.3
124,790	+				+0.0
124,790	+				-0.3
124,814	+				-2.0
124,815	-				-0.5
124,856	+				+2.4
124,939	+				+1.4
124,955	+				-0.3
124,975	+				+0.2
125,049	-				+2.8
125,102	+		BACOVA_01466	0.51	-1.1
125,102	+		BACOVA_01466	0.51	-0.1
125,103	-		BACOVA_01466	0.52	-0.9
125,184	+				+1.8
125,184	+				-1.2
125,185	-				-1.3
125,185	-				-0.4
125,190	-				-2.6
125,190	-				-0.7
125,191	+				-0.3
125,191	+				+0.1
125,213	+				-0.4
125,228	-				+2.4
125,233	+				-0.4
125,234	-				-1.1
125,234	-				-1.3
125,242	-				+2.0
125,244	+				+0.3
125,248	+				+0.5
125,376	+		BACOVA_01467	0.33	-0.4
125,376	+		BACOVA_01467	0.33	-0.1
125,432	+		BACOVA_01467	0.50	-0.7
125,473	+		BACOVA_01467	0.63	-1.8
125,474	-		BACOVA_01467	0.63	-1.1
125,474	-		BACOVA_01467	0.63	-0.4
125,476	-		BACOVA_01467	0.64	+1.8
125,493	+		BACOVA_01467	0.69	+0.5
125,499	+		BACOVA_01467	0.71	-0.2
125,597	+				-1.0
125,604	+				+0.6
125,605	-				-2.1
125,605	-				+1.4
125,620	+				-2.0
125,626	+				+0.4
125,627	-				-0.3
125,644	+				-1.1
125,645	-				-0.2
125,645	-				-1.3
125,662	-				+0.1
125,676	+				-0.9
125,708	+				+0.8
125,708	+				-1.7
125,709	-				+0.6
125,709	-				+1.4
125,772	+				+0.7
125,792	+				-2.1
125,855	+		BACOVA_01468	0.11	-0.6
125,982	-		BACOVA_01468	0.21	-0.4
126,043	+		BACOVA_01468	0.27	+0.8
126,066	-		BACOVA_01468	0.29	-1.0
126,137	+		BACOVA_01468	0.35	-1.8
126,155	+		BACOVA_01468	0.36	+1.1
126,155	+		BACOVA_01468	0.36	-1.7
126,155	+		BACOVA_01468	0.36	+1.1
126,156	-		BACOVA_01468	0.36	+0.2
126,161	+		BACOVA_01468	0.37	+0.1
126,176	+		BACOVA_01468	0.38	-0.6
126,176	+		BACOVA_01468	0.38	+0.9
126,193	+		BACOVA_01468	0.39	+0.6
126,221	+		BACOVA_01468	0.42	-0.7
126,222	-		BACOVA_01468	0.42	-0.2
126,223	+		BACOVA_01468	0.42	-1.2
126,223	+		BACOVA_01468	0.42	+1.8
126,223	+		BACOVA_01468	0.42	-1.6
126,224	-		BACOVA_01468	0.42	+0.2
126,224	-		BACOVA_01468	0.42	+3.2
126,236	+		BACOVA_01468	0.43	+1.4
126,263	+		BACOVA_01468	0.45	+0.4
126,263	+		BACOVA_01468	0.45	-0.1
126,263	+		BACOVA_01468	0.45	+3.1
126,320	+		BACOVA_01468	0.50	-0.7
126,343	+		BACOVA_01468	0.52	-1.9
126,344	-		BACOVA_01468	0.52	+1.1
126,454	-		BACOVA_01468	0.62	-2.4
126,495	+		BACOVA_01468	0.65	-0.2
126,495	+		BACOVA_01468	0.65	-1.2
126,495	+		BACOVA_01468	0.65	-1.0
126,496	-		BACOVA_01468	0.65	+1.4
126,533	+		BACOVA_01468	0.68	-1.1
126,566	+		BACOVA_01468	0.71	-0.8
126,567	-		BACOVA_01468	0.71	+0.4
126,630	-		BACOVA_01468	0.77	+0.1
126,783	-		BACOVA_01468	0.90	-1.0
126,785	-		BACOVA_01468	0.90	-0.2
126,830	-				+1.4
126,848	-				+2.3
126,853	+				-2.6
126,863	+				-1.8
126,869	+				-0.7
126,870	-				+0.6
126,886	-				-0.6
126,888	+				-0.6
126,897	-				+0.2
126,922	-				-0.1
126,927	-				-1.0
126,928	+				-0.2
126,960	-				+1.0
126,960	-				-0.3
126,969	+				+1.8
126,969	+				-0.7
126,969	+				-0.5
126,970	-				+1.7
126,970	-				+3.2
126,976	+				-0.2
126,983	+				+0.6
127,025	+				+3.8
127,026	-				+0.8
127,027	+				-0.2
127,027	+				-2.3
127,027	+				-2.7
127,028	-				+0.1
127,028	-				-0.2
127,028	-				-0.9
127,029	+				-0.4
127,030	-				+0.4
127,056	-				+1.4
127,062	+				-0.6
127,066	-				-1.0
127,068	-				-1.8
127,071	+				+1.2
127,071	+				-1.2
127,072	-				+2.8
127,072	-				-0.8
127,072	-				+1.0
127,072	-				+2.4
127,080	-				+0.2
127,102	-				-0.2
127,129	-		BACOVA_01469	0.10	+0.1
127,230	+		BACOVA_01469	0.29	-0.2
127,259	+		BACOVA_01469	0.35	+0.4
127,345	+		BACOVA_01469	0.51	+1.4
127,345	+		BACOVA_01469	0.51	-0.8
127,345	+		BACOVA_01469	0.51	+0.6
127,346	-		BACOVA_01469	0.51	+0.4
127,349	+		BACOVA_01469	0.52	-0.6
127,350	-		BACOVA_01469	0.52	+2.5
127,367	+		BACOVA_01469	0.55	-0.3
127,475	+		BACOVA_01469	0.75	-2.2
127,476	-		BACOVA_01469	0.76	-0.2
127,476	-		BACOVA_01469	0.76	-0.8
127,510	-		BACOVA_01469	0.82	-1.7
127,511	+		BACOVA_01469	0.82	+0.7
127,511	+		BACOVA_01469	0.82	+1.1
127,511	+		BACOVA_01469	0.82	-0.6
127,511	+		BACOVA_01469	0.82	+0.1
127,511	+		BACOVA_01469	0.82	-0.6
127,511	+		BACOVA_01469	0.82	+0.1
127,512	-		BACOVA_01469	0.82	-3.1
127,512	-		BACOVA_01469	0.82	-0.4
127,512	-		BACOVA_01469	0.82	+0.2
127,512	-		BACOVA_01469	0.82	-1.8
127,515	+		BACOVA_01469	0.83	-0.5
127,515	+		BACOVA_01469	0.83	+0.8
127,515	+		BACOVA_01469	0.83	-0.3
127,516	-		BACOVA_01469	0.83	-0.4
127,593	+				+1.8
127,605	+				-0.9
127,605	+				+0.1
127,632	+				-0.8
127,645	+				-0.9
127,651	+				+1.8
127,652	-				-0.9
127,652	-				+0.8
127,660	+				+0.4
127,671	-				-0.9
127,676	+				+1.5
127,719	-				+0.6
127,730	+		BACOVA_01470	0.11	-0.2
127,730	+		BACOVA_01470	0.11	-2.8
127,730	+		BACOVA_01470	0.11	-0.3
127,770	-		BACOVA_01470	0.17	-0.2
127,852	+		BACOVA_01470	0.28	-1.1
127,853	-		BACOVA_01470	0.28	-1.8