Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00781

Experiment: amylopectin from maize 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00779 and BACOVA_00780 are separated by 11 nucleotidesBACOVA_00780 and BACOVA_00781 are separated by 1 nucleotidesBACOVA_00781 and BACOVA_00782 are separated by 77 nucleotides BACOVA_00779: BACOVA_00779 - hypothetical protein, at 464,006 to 464,734 _00779 BACOVA_00780: BACOVA_00780 - hypothetical protein, at 464,746 to 465,231 _00780 BACOVA_00781: BACOVA_00781 - hypothetical protein, at 465,233 to 466,000 _00781 BACOVA_00782: BACOVA_00782 - transporter, major facilitator family protein, at 466,078 to 467,331 _00782 Position (kb) 465 466 467Strain fitness (log2 ratio) -2 -1 0 1 2 3at 464.269 kb on + strand, within BACOVA_00779at 464.269 kb on + strand, within BACOVA_00779at 464.269 kb on + strand, within BACOVA_00779at 464.294 kb on + strand, within BACOVA_00779at 464.308 kb on + strand, within BACOVA_00779at 464.390 kb on + strand, within BACOVA_00779at 464.391 kb on - strand, within BACOVA_00779at 464.393 kb on - strand, within BACOVA_00779at 464.393 kb on - strand, within BACOVA_00779at 464.416 kb on - strand, within BACOVA_00779at 464.416 kb on - strand, within BACOVA_00779at 464.416 kb on - strand, within BACOVA_00779at 464.441 kb on - strand, within BACOVA_00779at 464.453 kb on - strand, within BACOVA_00779at 464.453 kb on - strand, within BACOVA_00779at 464.453 kb on - strand, within BACOVA_00779at 464.456 kb on - strand, within BACOVA_00779at 464.509 kb on + strand, within BACOVA_00779at 464.517 kb on - strand, within BACOVA_00779at 464.526 kb on + strand, within BACOVA_00779at 464.527 kb on - strand, within BACOVA_00779at 464.530 kb on + strand, within BACOVA_00779at 464.531 kb on - strand, within BACOVA_00779at 464.548 kb on + strand, within BACOVA_00779at 464.548 kb on + strand, within BACOVA_00779at 464.549 kb on - strand, within BACOVA_00779at 464.549 kb on - strand, within BACOVA_00779at 464.549 kb on - strand, within BACOVA_00779at 464.550 kb on + strand, within BACOVA_00779at 464.551 kb on - strand, within BACOVA_00779at 464.554 kb on - strand, within BACOVA_00779at 464.576 kb on - strand, within BACOVA_00779at 464.585 kb on + strand, within BACOVA_00779at 464.591 kb on - strand, within BACOVA_00779at 464.593 kb on - strand, within BACOVA_00779at 464.593 kb on - strand, within BACOVA_00779at 464.593 kb on - strand, within BACOVA_00779at 464.656 kb on + strand, within BACOVA_00779at 464.671 kb on + strandat 464.671 kb on + strandat 464.676 kb on - strandat 464.704 kb on - strandat 464.706 kb on + strandat 464.747 kb on + strandat 464.747 kb on + strandat 464.800 kb on - strand, within BACOVA_00780at 464.848 kb on - strand, within BACOVA_00780at 464.893 kb on + strand, within BACOVA_00780at 464.923 kb on + strand, within BACOVA_00780at 464.934 kb on - strand, within BACOVA_00780at 464.963 kb on - strand, within BACOVA_00780at 464.975 kb on + strand, within BACOVA_00780at 464.975 kb on + strand, within BACOVA_00780at 464.976 kb on - strand, within BACOVA_00780at 465.080 kb on + strand, within BACOVA_00780at 465.180 kb on + strand, within BACOVA_00780at 465.181 kb on - strand, within BACOVA_00780at 465.188 kb on - strandat 465.227 kb on - strandat 465.260 kb on + strandat 465.350 kb on + strand, within BACOVA_00781at 465.350 kb on + strand, within BACOVA_00781at 465.488 kb on + strand, within BACOVA_00781at 465.579 kb on - strand, within BACOVA_00781at 465.630 kb on - strand, within BACOVA_00781at 465.752 kb on - strand, within BACOVA_00781at 465.851 kb on + strand, within BACOVA_00781at 465.851 kb on + strand, within BACOVA_00781at 465.852 kb on - strand, within BACOVA_00781at 465.889 kb on + strand, within BACOVA_00781at 465.905 kb on + strand, within BACOVA_00781at 465.905 kb on + strand, within BACOVA_00781at 465.961 kb on + strandat 465.962 kb on - strandat 466.083 kb on + strandat 466.092 kb on + strandat 466.112 kb on + strandat 466.155 kb on + strandat 466.188 kb on + strandat 466.424 kb on + strand, within BACOVA_00782at 466.433 kb on + strand, within BACOVA_00782at 466.433 kb on + strand, within BACOVA_00782at 466.434 kb on - strand, within BACOVA_00782at 466.434 kb on - strand, within BACOVA_00782at 466.471 kb on + strand, within BACOVA_00782at 466.486 kb on - strand, within BACOVA_00782at 466.548 kb on - strand, within BACOVA_00782at 466.583 kb on - strand, within BACOVA_00782at 466.592 kb on + strand, within BACOVA_00782at 466.592 kb on + strand, within BACOVA_00782at 466.593 kb on - strand, within BACOVA_00782at 466.597 kb on - strand, within BACOVA_00782at 466.597 kb on - strand, within BACOVA_00782at 466.609 kb on - strand, within BACOVA_00782at 466.610 kb on + strand, within BACOVA_00782at 466.610 kb on + strand, within BACOVA_00782at 466.696 kb on - strand, within BACOVA_00782at 466.849 kb on - strand, within BACOVA_00782at 466.849 kb on - strand, within BACOVA_00782at 466.874 kb on + strand, within BACOVA_00782at 466.878 kb on + strand, within BACOVA_00782at 466.879 kb on - strand, within BACOVA_00782at 466.885 kb on - strand, within BACOVA_00782at 466.885 kb on - strand, within BACOVA_00782at 466.915 kb on + strand, within BACOVA_00782at 466.915 kb on + strand, within BACOVA_00782at 466.915 kb on + strand, within BACOVA_00782at 466.922 kb on - strand, within BACOVA_00782

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Per-strain Table

Position Strand Gene LocusTag Fraction amylopectin from maize 2.5 mg/ml (C)
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464,269 + BACOVA_00779 0.36 +1.6
464,269 + BACOVA_00779 0.36 -0.3
464,269 + BACOVA_00779 0.36 +0.7
464,294 + BACOVA_00779 0.40 +0.2
464,308 + BACOVA_00779 0.41 +0.0
464,390 + BACOVA_00779 0.53 +1.0
464,391 - BACOVA_00779 0.53 -1.5
464,393 - BACOVA_00779 0.53 -1.3
464,393 - BACOVA_00779 0.53 +2.4
464,416 - BACOVA_00779 0.56 +1.0
464,416 - BACOVA_00779 0.56 -0.3
464,416 - BACOVA_00779 0.56 -2.0
464,441 - BACOVA_00779 0.60 +2.7
464,453 - BACOVA_00779 0.61 +1.5
464,453 - BACOVA_00779 0.61 +1.0
464,453 - BACOVA_00779 0.61 -1.6
464,456 - BACOVA_00779 0.62 -1.3
464,509 + BACOVA_00779 0.69 +1.0
464,517 - BACOVA_00779 0.70 -0.8
464,526 + BACOVA_00779 0.71 +0.5
464,527 - BACOVA_00779 0.71 -1.0
464,530 + BACOVA_00779 0.72 +0.8
464,531 - BACOVA_00779 0.72 -0.5
464,548 + BACOVA_00779 0.74 -0.5
464,548 + BACOVA_00779 0.74 -0.5
464,549 - BACOVA_00779 0.74 +0.7
464,549 - BACOVA_00779 0.74 +2.0
464,549 - BACOVA_00779 0.74 +0.2
464,550 + BACOVA_00779 0.75 +2.2
464,551 - BACOVA_00779 0.75 +1.0
464,554 - BACOVA_00779 0.75 +1.9
464,576 - BACOVA_00779 0.78 +0.5
464,585 + BACOVA_00779 0.79 +0.5
464,591 - BACOVA_00779 0.80 +3.6
464,593 - BACOVA_00779 0.81 +3.4
464,593 - BACOVA_00779 0.81 +0.0
464,593 - BACOVA_00779 0.81 -0.5
464,656 + BACOVA_00779 0.89 +2.0
464,671 + -0.3
464,671 + +0.1
464,676 - +0.9
464,704 - +2.0
464,706 + +0.0
464,747 + +0.0
464,747 + +0.5
464,800 - BACOVA_00780 0.11 +2.2
464,848 - BACOVA_00780 0.21 -0.3
464,893 + BACOVA_00780 0.30 -0.1
464,923 + BACOVA_00780 0.36 +2.8
464,934 - BACOVA_00780 0.39 -0.3
464,963 - BACOVA_00780 0.45 -0.3
464,975 + BACOVA_00780 0.47 -0.3
464,975 + BACOVA_00780 0.47 +0.0
464,976 - BACOVA_00780 0.47 +2.0
465,080 + BACOVA_00780 0.69 +0.0
465,180 + BACOVA_00780 0.89 -0.3
465,181 - BACOVA_00780 0.90 -0.4
465,188 - +0.5
465,227 - +0.5
465,260 + -0.8
465,350 + BACOVA_00781 0.15 +0.3
465,350 + BACOVA_00781 0.15 -2.1
465,488 + BACOVA_00781 0.33 -0.5
465,579 - BACOVA_00781 0.45 -0.3
465,630 - BACOVA_00781 0.52 +0.0
465,752 - BACOVA_00781 0.68 +2.0
465,851 + BACOVA_00781 0.80 -2.2
465,851 + BACOVA_00781 0.80 -1.3
465,852 - BACOVA_00781 0.81 +0.0
465,889 + BACOVA_00781 0.85 +0.9
465,905 + BACOVA_00781 0.88 -2.7
465,905 + BACOVA_00781 0.88 +0.7
465,961 + -1.1
465,962 - +1.5
466,083 + -2.2
466,092 + +0.5
466,112 + -0.3
466,155 + +1.6
466,188 + +0.7
466,424 + BACOVA_00782 0.28 +0.5
466,433 + BACOVA_00782 0.28 -1.0
466,433 + BACOVA_00782 0.28 -0.2
466,434 - BACOVA_00782 0.28 +0.4
466,434 - BACOVA_00782 0.28 +1.5
466,471 + BACOVA_00782 0.31 -0.8
466,486 - BACOVA_00782 0.33 -0.5
466,548 - BACOVA_00782 0.37 -1.4
466,583 - BACOVA_00782 0.40 +1.0
466,592 + BACOVA_00782 0.41 -1.3
466,592 + BACOVA_00782 0.41 +1.0
466,593 - BACOVA_00782 0.41 -1.5
466,597 - BACOVA_00782 0.41 +0.5
466,597 - BACOVA_00782 0.41 -2.0
466,609 - BACOVA_00782 0.42 -1.2
466,610 + BACOVA_00782 0.42 -2.0
466,610 + BACOVA_00782 0.42 +0.3
466,696 - BACOVA_00782 0.49 -0.1
466,849 - BACOVA_00782 0.61 +2.0
466,849 - BACOVA_00782 0.61 +0.5
466,874 + BACOVA_00782 0.63 +0.0
466,878 + BACOVA_00782 0.64 -0.3
466,879 - BACOVA_00782 0.64 -0.7
466,885 - BACOVA_00782 0.64 +1.5
466,885 - BACOVA_00782 0.64 -0.4
466,915 + BACOVA_00782 0.67 -0.8
466,915 + BACOVA_00782 0.67 +2.9
466,915 + BACOVA_00782 0.67 -0.5
466,922 - BACOVA_00782 0.67 -1.1

Or see this region's nucleotide sequence