Experiment: Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01770 and OLJFJH_01775 are separated by 23 nucleotides OLJFJH_01775 and OLJFJH_01780 are separated by 23 nucleotides OLJFJH_01780 and OLJFJH_01785 are separated by 22 nucleotides
OLJFJH_01770: OLJFJH_01770 - hypothetical protein, at 308,456 to 309,523
_01770
OLJFJH_01775: OLJFJH_01775 - hypothetical protein, at 309,547 to 309,981
_01775
OLJFJH_01780: OLJFJH_01780 - flagellar biosynthesis protein FlgH, at 310,005 to 311,072
_01780
OLJFJH_01785: OLJFJH_01785 - type VI secretion system tip protein VgrG, at 311,095 to 313,059
_01785
Position (kb) 310
311
312 Strain fitness (log2 ratio) -2
-1
0
1 at 309.022 kb on - strand, within OLJFJH_01770 at 309.057 kb on + strand, within OLJFJH_01770 at 309.057 kb on + strand, within OLJFJH_01770 at 309.058 kb on - strand, within OLJFJH_01770 at 309.058 kb on - strand, within OLJFJH_01770 at 309.084 kb on + strand, within OLJFJH_01770 at 309.100 kb on + strand, within OLJFJH_01770 at 309.101 kb on - strand, within OLJFJH_01770 at 309.101 kb on - strand, within OLJFJH_01770 at 309.101 kb on - strand, within OLJFJH_01770 at 309.191 kb on - strand, within OLJFJH_01770 at 309.220 kb on + strand, within OLJFJH_01770 at 309.221 kb on - strand, within OLJFJH_01770 at 309.319 kb on + strand, within OLJFJH_01770 at 309.319 kb on + strand, within OLJFJH_01770 at 309.319 kb on + strand, within OLJFJH_01770 at 309.319 kb on + strand, within OLJFJH_01770 at 309.320 kb on - strand, within OLJFJH_01770 at 309.320 kb on - strand, within OLJFJH_01770 at 309.320 kb on - strand, within OLJFJH_01770 at 309.320 kb on - strand, within OLJFJH_01770 at 309.384 kb on - strand, within OLJFJH_01770 at 309.436 kb on + strand at 309.436 kb on + strand at 309.438 kb on + strand at 309.438 kb on + strand at 309.438 kb on + strand at 309.438 kb on + strand at 310.185 kb on + strand, within OLJFJH_01780 at 310.199 kb on + strand, within OLJFJH_01780 at 310.199 kb on + strand, within OLJFJH_01780 at 310.200 kb on - strand, within OLJFJH_01780 at 310.229 kb on + strand, within OLJFJH_01780 at 310.230 kb on - strand, within OLJFJH_01780 at 310.298 kb on - strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.305 kb on + strand, within OLJFJH_01780 at 310.306 kb on - strand, within OLJFJH_01780 at 310.306 kb on - strand, within OLJFJH_01780 at 310.306 kb on - strand, within OLJFJH_01780 at 310.306 kb on - strand, within OLJFJH_01780 at 310.306 kb on - strand, within OLJFJH_01780 at 310.306 kb on - strand, within OLJFJH_01780 at 310.306 kb on - strand, within OLJFJH_01780 at 310.308 kb on - strand, within OLJFJH_01780 at 310.388 kb on + strand, within OLJFJH_01780 at 310.388 kb on + strand, within OLJFJH_01780 at 310.388 kb on + strand, within OLJFJH_01780 at 310.389 kb on - strand, within OLJFJH_01780 at 310.389 kb on - strand, within OLJFJH_01780 at 310.390 kb on + strand, within OLJFJH_01780 at 310.390 kb on + strand, within OLJFJH_01780 at 310.390 kb on + strand, within OLJFJH_01780 at 310.391 kb on - strand, within OLJFJH_01780 at 310.391 kb on - strand, within OLJFJH_01780 at 310.391 kb on - strand, within OLJFJH_01780 at 310.391 kb on - strand, within OLJFJH_01780 at 310.392 kb on + strand, within OLJFJH_01780 at 310.392 kb on + strand, within OLJFJH_01780 at 310.392 kb on + strand, within OLJFJH_01780 at 310.392 kb on + strand, within OLJFJH_01780 at 310.393 kb on - strand, within OLJFJH_01780 at 310.393 kb on - strand, within OLJFJH_01780 at 310.393 kb on - strand, within OLJFJH_01780 at 310.454 kb on - strand, within OLJFJH_01780 at 310.493 kb on - strand, within OLJFJH_01780 at 310.561 kb on + strand, within OLJFJH_01780 at 310.561 kb on + strand, within OLJFJH_01780 at 310.561 kb on + strand, within OLJFJH_01780 at 310.561 kb on + strand, within OLJFJH_01780 at 310.561 kb on + strand, within OLJFJH_01780 at 310.561 kb on + strand, within OLJFJH_01780 at 310.561 kb on + strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.562 kb on - strand, within OLJFJH_01780 at 310.592 kb on + strand, within OLJFJH_01780 at 310.593 kb on - strand, within OLJFJH_01780 at 310.593 kb on - strand, within OLJFJH_01780 at 310.593 kb on - strand, within OLJFJH_01780 at 310.593 kb on - strand, within OLJFJH_01780 at 310.593 kb on - strand, within OLJFJH_01780 at 310.755 kb on + strand, within OLJFJH_01780 at 310.755 kb on + strand, within OLJFJH_01780 at 310.953 kb on + strand, within OLJFJH_01780 at 311.173 kb on + strand at 311.173 kb on + strand at 311.174 kb on - strand at 311.206 kb on - strand at 311.225 kb on - strand at 311.225 kb on - strand at 311.303 kb on + strand, within OLJFJH_01785 at 311.304 kb on - strand, within OLJFJH_01785 at 311.304 kb on - strand, within OLJFJH_01785 at 311.304 kb on - strand, within OLJFJH_01785 at 311.308 kb on - strand, within OLJFJH_01785 at 311.595 kb on + strand, within OLJFJH_01785 at 311.628 kb on + strand, within OLJFJH_01785 at 311.628 kb on + strand, within OLJFJH_01785 at 311.629 kb on - strand, within OLJFJH_01785 at 311.653 kb on - strand, within OLJFJH_01785
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:inactivated cocktail;Temp:17;Samp:7-6 remove 309,022 - OLJFJH_01770 0.53 -0.3 309,057 + OLJFJH_01770 0.56 +0.4 309,057 + OLJFJH_01770 0.56 -1.8 309,058 - OLJFJH_01770 0.56 -1.0 309,058 - OLJFJH_01770 0.56 -1.3 309,084 + OLJFJH_01770 0.59 -1.9 309,100 + OLJFJH_01770 0.60 -2.2 309,101 - OLJFJH_01770 0.60 -1.1 309,101 - OLJFJH_01770 0.60 -1.0 309,101 - OLJFJH_01770 0.60 -1.0 309,191 - OLJFJH_01770 0.69 -1.5 309,220 + OLJFJH_01770 0.72 +0.0 309,221 - OLJFJH_01770 0.72 -1.1 309,319 + OLJFJH_01770 0.81 -1.3 309,319 + OLJFJH_01770 0.81 -1.2 309,319 + OLJFJH_01770 0.81 -1.9 309,319 + OLJFJH_01770 0.81 +0.1 309,320 - OLJFJH_01770 0.81 -1.4 309,320 - OLJFJH_01770 0.81 -1.5 309,320 - OLJFJH_01770 0.81 -1.4 309,320 - OLJFJH_01770 0.81 -0.8 309,384 - OLJFJH_01770 0.87 -0.9 309,436 + +0.4 309,436 + -1.0 309,438 + -0.1 309,438 + -0.4 309,438 + -1.0 309,438 + -0.8 310,185 + OLJFJH_01780 0.17 +0.2 310,199 + OLJFJH_01780 0.18 +0.0 310,199 + OLJFJH_01780 0.18 -0.2 310,200 - OLJFJH_01780 0.18 -0.3 310,229 + OLJFJH_01780 0.21 -0.8 310,230 - OLJFJH_01780 0.21 +0.3 310,298 - OLJFJH_01780 0.27 -0.8 310,305 + OLJFJH_01780 0.28 +0.1 310,305 + OLJFJH_01780 0.28 -0.1 310,305 + OLJFJH_01780 0.28 +1.6 310,305 + OLJFJH_01780 0.28 +0.6 310,305 + OLJFJH_01780 0.28 -0.2 310,305 + OLJFJH_01780 0.28 +0.3 310,305 + OLJFJH_01780 0.28 +0.7 310,305 + OLJFJH_01780 0.28 +0.5 310,306 - OLJFJH_01780 0.28 +0.9 310,306 - OLJFJH_01780 0.28 -0.6 310,306 - OLJFJH_01780 0.28 +1.5 310,306 - OLJFJH_01780 0.28 +0.2 310,306 - OLJFJH_01780 0.28 +0.4 310,306 - OLJFJH_01780 0.28 +0.6 310,306 - OLJFJH_01780 0.28 +0.2 310,308 - OLJFJH_01780 0.28 -0.2 310,388 + OLJFJH_01780 0.36 -0.1 310,388 + OLJFJH_01780 0.36 -0.7 310,388 + OLJFJH_01780 0.36 +0.9 310,389 - OLJFJH_01780 0.36 +0.2 310,389 - OLJFJH_01780 0.36 +0.9 310,390 + OLJFJH_01780 0.36 +0.4 310,390 + OLJFJH_01780 0.36 -0.6 310,390 + OLJFJH_01780 0.36 -0.2 310,391 - OLJFJH_01780 0.36 +0.0 310,391 - OLJFJH_01780 0.36 -0.0 310,391 - OLJFJH_01780 0.36 -0.1 310,391 - OLJFJH_01780 0.36 +0.0 310,392 + OLJFJH_01780 0.36 +1.7 310,392 + OLJFJH_01780 0.36 -0.4 310,392 + OLJFJH_01780 0.36 +0.7 310,392 + OLJFJH_01780 0.36 +0.4 310,393 - OLJFJH_01780 0.36 +0.3 310,393 - OLJFJH_01780 0.36 +0.5 310,393 - OLJFJH_01780 0.36 +0.5 310,454 - OLJFJH_01780 0.42 -0.2 310,493 - OLJFJH_01780 0.46 +0.4 310,561 + OLJFJH_01780 0.52 -0.4 310,561 + OLJFJH_01780 0.52 -0.3 310,561 + OLJFJH_01780 0.52 +1.1 310,561 + OLJFJH_01780 0.52 -0.2 310,561 + OLJFJH_01780 0.52 -0.4 310,561 + OLJFJH_01780 0.52 +0.8 310,561 + OLJFJH_01780 0.52 -0.1 310,562 - OLJFJH_01780 0.52 +0.6 310,562 - OLJFJH_01780 0.52 -0.5 310,562 - OLJFJH_01780 0.52 -0.2 310,562 - OLJFJH_01780 0.52 +0.7 310,562 - OLJFJH_01780 0.52 -0.1 310,562 - OLJFJH_01780 0.52 -0.4 310,562 - OLJFJH_01780 0.52 +1.4 310,562 - OLJFJH_01780 0.52 +0.5 310,592 + OLJFJH_01780 0.55 +0.7 310,593 - OLJFJH_01780 0.55 -0.3 310,593 - OLJFJH_01780 0.55 +0.6 310,593 - OLJFJH_01780 0.55 +0.3 310,593 - OLJFJH_01780 0.55 +0.1 310,593 - OLJFJH_01780 0.55 +0.2 310,755 + OLJFJH_01780 0.70 +0.2 310,755 + OLJFJH_01780 0.70 -0.0 310,953 + OLJFJH_01780 0.89 -0.2 311,173 + +0.4 311,173 + +1.1 311,174 - -0.2 311,206 - +0.9 311,225 - +0.3 311,225 - +0.1 311,303 + OLJFJH_01785 0.11 +0.2 311,304 - OLJFJH_01785 0.11 -1.1 311,304 - OLJFJH_01785 0.11 +0.1 311,304 - OLJFJH_01785 0.11 +0.4 311,308 - OLJFJH_01785 0.11 -0.3 311,595 + OLJFJH_01785 0.25 +0.4 311,628 + OLJFJH_01785 0.27 +0.3 311,628 + OLJFJH_01785 0.27 +0.2 311,629 - OLJFJH_01785 0.27 -0.0 311,653 - OLJFJH_01785 0.28 +0.3
Or see this region's nucleotide sequence