Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00887

Experiment: Glucomannan (konjac) 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucomannan (konjac) 2.5 mg/ml (C)
10,618	+		BACOVA_00886	0.38	-0.5
10,618	+		BACOVA_00886	0.38	-0.1
10,619	-		BACOVA_00886	0.38	+0.3
10,639	+		BACOVA_00886	0.39	+0.2
10,728	+		BACOVA_00886	0.45	-1.4
10,729	-		BACOVA_00886	0.45	+0.1
10,765	-		BACOVA_00886	0.47	+0.1
10,765	-		BACOVA_00886	0.47	-1.2
10,799	-		BACOVA_00886	0.49	+0.9
10,815	+		BACOVA_00886	0.50	-1.1
10,816	-		BACOVA_00886	0.50	+1.1
10,908	+		BACOVA_00886	0.56	-1.2
10,909	-		BACOVA_00886	0.56	-0.3
10,909	-		BACOVA_00886	0.56	+0.1
10,930	+		BACOVA_00886	0.58	+1.7
10,931	-		BACOVA_00886	0.58	+2.1
10,940	+		BACOVA_00886	0.58	-0.1
10,948	-		BACOVA_00886	0.59	+0.5
10,951	+		BACOVA_00886	0.59	+1.1
10,951	+		BACOVA_00886	0.59	+0.5
10,953	+		BACOVA_00886	0.59	+0.7
10,954	-		BACOVA_00886	0.59	+0.5
10,963	-		BACOVA_00886	0.60	-0.1
10,968	+		BACOVA_00886	0.60	-0.2
10,969	-		BACOVA_00886	0.60	+0.1
10,969	-		BACOVA_00886	0.60	-0.2
10,985	+		BACOVA_00886	0.61	+0.2
10,985	+		BACOVA_00886	0.61	-0.5
10,985	+		BACOVA_00886	0.61	-1.0
10,986	-		BACOVA_00886	0.61	+0.2
11,005	-		BACOVA_00886	0.62	+1.1
11,006	+		BACOVA_00886	0.63	-1.5
11,006	+		BACOVA_00886	0.63	-1.2
11,006	+		BACOVA_00886	0.63	-0.5
11,007	-		BACOVA_00886	0.63	+0.8
11,015	+		BACOVA_00886	0.63	-0.9
11,017	+		BACOVA_00886	0.63	+0.5
11,067	+		BACOVA_00886	0.66	+1.4
11,074	-		BACOVA_00886	0.67	-0.6
11,149	-		BACOVA_00886	0.72	+0.6
11,163	+		BACOVA_00886	0.73	-1.7
11,164	-		BACOVA_00886	0.73	-1.2
11,175	-		BACOVA_00886	0.73	+1.1
11,185	-		BACOVA_00886	0.74	-0.2
11,257	-		BACOVA_00886	0.78	-0.2
11,269	-		BACOVA_00886	0.79	-0.6
11,275	-		BACOVA_00886	0.80	+0.3
11,289	-		BACOVA_00886	0.81	-0.5
11,293	+		BACOVA_00886	0.81	-1.4
11,293	+		BACOVA_00886	0.81	-1.9
11,294	-		BACOVA_00886	0.81	+0.5
11,294	-		BACOVA_00886	0.81	+1.7
11,294	-		BACOVA_00886	0.81	-0.1
11,294	-		BACOVA_00886	0.81	+1.9
11,294	-		BACOVA_00886	0.81	+0.2
11,294	-		BACOVA_00886	0.81	+0.0
11,294	-		BACOVA_00886	0.81	+1.9
11,298	-		BACOVA_00886	0.81	+0.2
11,311	-		BACOVA_00886	0.82	+0.1
11,314	+		BACOVA_00886	0.82	+0.8
11,314	+		BACOVA_00886	0.82	-0.2
11,315	-		BACOVA_00886	0.82	+0.5
11,320	-		BACOVA_00886	0.82	+0.6
11,320	-		BACOVA_00886	0.82	+0.8
11,325	+		BACOVA_00886	0.83	-0.5
11,345	-		BACOVA_00886	0.84	+0.7
11,373	+		BACOVA_00886	0.86	-0.2
11,373	+		BACOVA_00886	0.86	+0.6
11,374	-		BACOVA_00886	0.86	+0.5
11,374	-		BACOVA_00886	0.86	-0.3
11,374	-		BACOVA_00886	0.86	+0.6
11,377	-		BACOVA_00886	0.86	+1.3
11,377	-		BACOVA_00886	0.86	+0.9
11,481	-				+0.8
11,481	-				-1.1
11,483	-				-0.2
11,590	-				-0.1
11,594	-				+0.4
11,615	-				-0.9
11,635	+				-0.3
11,638	-				+1.4
11,639	+				-1.0
11,639	+				+0.9
11,670	+				+2.1
11,694	-		BACOVA_00887	0.10	-0.4
11,703	+		BACOVA_00887	0.12	+0.3
11,704	-		BACOVA_00887	0.12	-0.7
11,719	+		BACOVA_00887	0.14	-2.1
11,720	-		BACOVA_00887	0.14	-0.8
11,721	+		BACOVA_00887	0.14	-0.0
11,762	+		BACOVA_00887	0.19	-1.7
11,801	+		BACOVA_00887	0.25	+2.1
11,802	-		BACOVA_00887	0.25	-1.8
11,805	-		BACOVA_00887	0.25	+0.8
11,831	+		BACOVA_00887	0.29	-1.5
11,840	+		BACOVA_00887	0.30	-1.2
11,865	-		BACOVA_00887	0.33	-0.7
11,900	-		BACOVA_00887	0.38	-1.2
11,900	-		BACOVA_00887	0.38	+0.5
11,921	+		BACOVA_00887	0.41	-0.7
11,921	+		BACOVA_00887	0.41	+0.3
11,922	-		BACOVA_00887	0.41	-0.6
11,972	-		BACOVA_00887	0.48	+1.1
12,066	+		BACOVA_00887	0.60	+0.8
12,067	-		BACOVA_00887	0.60	-0.2
12,075	-		BACOVA_00887	0.61	-0.9
12,078	+		BACOVA_00887	0.62	-0.2
12,078	+		BACOVA_00887	0.62	-0.5
12,079	-		BACOVA_00887	0.62	+0.9
12,137	-		BACOVA_00887	0.70	-0.0
12,137	-		BACOVA_00887	0.70	+0.3
12,169	+		BACOVA_00887	0.74	-1.8
12,173	-		BACOVA_00887	0.74	-0.8
12,224	+		BACOVA_00887	0.81	-0.1
12,240	+		BACOVA_00887	0.83	+0.1
12,246	+		BACOVA_00887	0.84	+0.5
12,256	-		BACOVA_00887	0.86	-1.4
12,279	+		BACOVA_00887	0.89	+0.2
12,292	+				-1.3
12,293	-				+0.1
12,337	-				+0.3
12,382	-				-0.7
12,382	-				-0.9
12,400	+				-0.6
12,401	-				+0.1
12,407	+				+0.9
12,414	-				+0.5
12,419	+				-2.5
12,450	+				+1.1
12,460	+				+0.2
12,461	-				+0.0
12,461	-				+0.9
12,468	+				+0.2
12,468	+				+0.1
12,496	-				-0.2
12,499	-				+0.7
12,504	+				-0.0
12,531	-				-0.0
12,531	-				-0.1
12,542	+				+0.8
12,546	+				-2.1
12,546	+				-1.9
12,555	+		BACOVA_00888	0.10	-0.3
12,555	+		BACOVA_00888	0.10	-1.5
12,555	+		BACOVA_00888	0.10	-0.4
12,556	-		BACOVA_00888	0.10	-0.2
12,599	-		BACOVA_00888	0.13	-0.8
12,611	+		BACOVA_00888	0.14	-1.8
12,647	-		BACOVA_00888	0.16	+0.9
12,706	-		BACOVA_00888	0.19	+0.9
12,722	-		BACOVA_00888	0.20	+0.6
12,789	-		BACOVA_00888	0.24	+1.1
12,822	+		BACOVA_00888	0.26	+0.3
12,823	-		BACOVA_00888	0.26	+0.6
12,832	+		BACOVA_00888	0.27	+1.7
12,832	+		BACOVA_00888	0.27	-0.4
12,832	+		BACOVA_00888	0.27	-0.9
12,833	-		BACOVA_00888	0.27	+0.5
12,876	-		BACOVA_00888	0.30	-1.3
12,876	-		BACOVA_00888	0.30	-1.0
12,886	-		BACOVA_00888	0.30	+0.1
12,914	+		BACOVA_00888	0.32	+0.7
12,970	-		BACOVA_00888	0.35	-0.7
12,970	-		BACOVA_00888	0.35	-0.4
12,970	-		BACOVA_00888	0.35	+1.1
12,986	+		BACOVA_00888	0.36	+0.7
12,995	+		BACOVA_00888	0.37	-0.7
12,996	-		BACOVA_00888	0.37	-0.9
12,996	-		BACOVA_00888	0.37	-4.6
12,996	-		BACOVA_00888	0.37	-1.0
12,998	-		BACOVA_00888	0.37	+0.3
13,067	-		BACOVA_00888	0.41	+0.3
13,069	-		BACOVA_00888	0.41	-0.6
13,118	+		BACOVA_00888	0.44	-1.1
13,119	-		BACOVA_00888	0.44	-1.9
13,136	-		BACOVA_00888	0.45	+0.6
13,136	-		BACOVA_00888	0.45	-0.1
13,170	+		BACOVA_00888	0.47	-1.6
13,170	+		BACOVA_00888	0.47	+1.1
13,171	-		BACOVA_00888	0.47	+0.9
13,174	+		BACOVA_00888	0.47	-0.7
13,174	+		BACOVA_00888	0.47	-0.5
13,175	-		BACOVA_00888	0.47	+0.1
13,175	-		BACOVA_00888	0.47	+2.2
13,175	-		BACOVA_00888	0.47	-0.4
13,219	+		BACOVA_00888	0.50	-1.3
13,220	-		BACOVA_00888	0.50	-0.9
13,220	-		BACOVA_00888	0.50	-0.1
13,220	-		BACOVA_00888	0.50	-1.0
13,220	-		BACOVA_00888	0.50	+0.1
13,221	+		BACOVA_00888	0.50	+0.0
13,222	-		BACOVA_00888	0.50	-1.0
13,222	-		BACOVA_00888	0.50	-0.2
13,222	-		BACOVA_00888	0.50	-0.4
13,222	-		BACOVA_00888	0.50	-0.7
13,227	+		BACOVA_00888	0.50	+1.4
13,228	-		BACOVA_00888	0.51	-1.1
13,244	-		BACOVA_00888	0.51	+0.0
13,245	+		BACOVA_00888	0.52	-0.3
13,262	+		BACOVA_00888	0.53	-2.7
13,262	+		BACOVA_00888	0.53	-1.9
13,262	+		BACOVA_00888	0.53	-0.5
13,262	+		BACOVA_00888	0.53	-1.2
13,264	+		BACOVA_00888	0.53	+0.5
13,271	+		BACOVA_00888	0.53	+0.7
13,326	+		BACOVA_00888	0.56	-1.0
13,337	+		BACOVA_00888	0.57	-1.4
13,337	+		BACOVA_00888	0.57	-0.2
13,342	-		BACOVA_00888	0.57	+0.1