Experiment: Locust bean gum 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02811 and BACOVA_02812 are separated by 594 nucleotides BACOVA_02812 and BACOVA_02813 are separated by 92 nucleotides
BACOVA_02811: BACOVA_02811 - arylsulfatase, at 278,071 to 279,597
_02811
BACOVA_02812: BACOVA_02812 - hypothetical protein, at 280,192 to 280,296
_02812
BACOVA_02813: BACOVA_02813 - hydrolase, alpha/beta domain protein, at 280,389 to 281,879
_02813
Position (kb) 280
281 Strain fitness (log2 ratio) -2
-1
0
1
2 at 279.243 kb on - strand, within BACOVA_02811 at 279.330 kb on + strand, within BACOVA_02811 at 279.344 kb on + strand, within BACOVA_02811 at 279.345 kb on - strand, within BACOVA_02811 at 279.451 kb on - strand at 279.451 kb on - strand at 279.459 kb on + strand at 279.460 kb on - strand at 279.536 kb on - strand at 279.549 kb on + strand at 279.550 kb on - strand at 279.570 kb on + strand at 279.570 kb on + strand at 279.570 kb on + strand at 279.571 kb on - strand at 279.571 kb on - strand at 279.577 kb on + strand at 279.578 kb on - strand at 279.581 kb on + strand at 279.581 kb on + strand at 279.582 kb on - strand at 279.604 kb on - strand at 279.604 kb on - strand at 279.604 kb on - strand at 279.615 kb on - strand at 279.639 kb on + strand at 279.644 kb on - strand at 279.664 kb on + strand at 279.695 kb on + strand at 279.709 kb on - strand at 279.735 kb on + strand at 279.736 kb on - strand at 279.748 kb on + strand at 279.748 kb on + strand at 279.753 kb on + strand at 279.754 kb on - strand at 279.754 kb on - strand at 279.754 kb on - strand at 279.777 kb on - strand at 279.832 kb on - strand at 279.868 kb on + strand at 279.891 kb on - strand at 279.893 kb on - strand at 279.982 kb on + strand at 280.015 kb on + strand at 280.016 kb on - strand at 280.019 kb on - strand at 280.047 kb on - strand at 280.049 kb on + strand at 280.049 kb on + strand at 280.050 kb on - strand at 280.050 kb on - strand at 280.051 kb on + strand at 280.093 kb on - strand at 280.146 kb on - strand at 280.167 kb on + strand at 280.184 kb on - strand at 280.229 kb on + strand, within BACOVA_02812 at 280.290 kb on + strand at 280.290 kb on + strand at 280.293 kb on - strand at 280.295 kb on - strand at 280.295 kb on - strand at 280.295 kb on - strand at 280.335 kb on + strand at 280.336 kb on - strand at 280.338 kb on + strand at 280.339 kb on - strand at 280.361 kb on + strand at 280.362 kb on - strand at 280.387 kb on + strand at 280.388 kb on - strand at 280.396 kb on - strand at 280.427 kb on + strand at 280.429 kb on + strand at 280.430 kb on - strand at 280.432 kb on - strand at 280.437 kb on - strand at 280.438 kb on + strand at 280.438 kb on + strand at 280.455 kb on - strand at 280.480 kb on + strand at 280.484 kb on + strand at 280.485 kb on - strand at 280.485 kb on - strand at 280.494 kb on + strand at 280.495 kb on - strand at 280.502 kb on + strand at 280.503 kb on - strand at 280.519 kb on + strand at 280.563 kb on - strand, within BACOVA_02813 at 280.613 kb on + strand, within BACOVA_02813 at 280.618 kb on + strand, within BACOVA_02813 at 280.619 kb on - strand, within BACOVA_02813 at 280.619 kb on - strand, within BACOVA_02813 at 280.619 kb on - strand, within BACOVA_02813 at 280.651 kb on - strand, within BACOVA_02813 at 280.707 kb on - strand, within BACOVA_02813 at 280.707 kb on - strand, within BACOVA_02813 at 280.724 kb on + strand, within BACOVA_02813 at 280.725 kb on - strand, within BACOVA_02813 at 280.729 kb on + strand, within BACOVA_02813 at 280.729 kb on + strand, within BACOVA_02813 at 280.730 kb on - strand, within BACOVA_02813 at 280.730 kb on - strand, within BACOVA_02813 at 280.762 kb on - strand, within BACOVA_02813 at 280.806 kb on - strand, within BACOVA_02813 at 280.934 kb on + strand, within BACOVA_02813 at 280.935 kb on - strand, within BACOVA_02813 at 280.937 kb on + strand, within BACOVA_02813 at 280.937 kb on + strand, within BACOVA_02813 at 280.993 kb on + strand, within BACOVA_02813 at 281.071 kb on - strand, within BACOVA_02813 at 281.099 kb on + strand, within BACOVA_02813 at 281.099 kb on + strand, within BACOVA_02813 at 281.099 kb on + strand, within BACOVA_02813 at 281.100 kb on - strand, within BACOVA_02813 at 281.100 kb on - strand, within BACOVA_02813 at 281.100 kb on - strand, within BACOVA_02813 at 281.175 kb on - strand, within BACOVA_02813 at 281.193 kb on + strand, within BACOVA_02813 at 281.246 kb on + strand, within BACOVA_02813 at 281.247 kb on - strand, within BACOVA_02813 at 281.247 kb on - strand, within BACOVA_02813
Per-strain Table
Position Strand Gene LocusTag Fraction Locust bean gum 2.5 mg/ml (C) remove 279,243 - BACOVA_02811 0.77 -0.2 279,330 + BACOVA_02811 0.82 -0.0 279,344 + BACOVA_02811 0.83 -0.2 279,345 - BACOVA_02811 0.83 +0.3 279,451 - -0.3 279,451 - +0.5 279,459 + +0.2 279,460 - +0.1 279,536 - +0.8 279,549 + -1.4 279,550 - -1.2 279,570 + -0.2 279,570 + +0.1 279,570 + -0.1 279,571 - -0.0 279,571 - -1.5 279,577 + +0.9 279,578 - +0.8 279,581 + +0.4 279,581 + +1.4 279,582 - +0.1 279,604 - +0.6 279,604 - -1.1 279,604 - +0.6 279,615 - +0.7 279,639 + -0.3 279,644 - +1.4 279,664 + +0.6 279,695 + +2.2 279,709 - +0.3 279,735 + -1.1 279,736 - +0.6 279,748 + -0.2 279,748 + -0.3 279,753 + +0.3 279,754 - -0.3 279,754 - -0.0 279,754 - -1.5 279,777 - -0.1 279,832 - +1.0 279,868 + -0.6 279,891 - +1.0 279,893 - +0.1 279,982 + +1.3 280,015 + -0.1 280,016 - -0.2 280,019 - -1.6 280,047 - -0.3 280,049 + -0.1 280,049 + +1.1 280,050 - -0.6 280,050 - +0.4 280,051 + -0.0 280,093 - -0.1 280,146 - -0.2 280,167 + +0.7 280,184 - +0.2 280,229 + BACOVA_02812 0.35 +0.3 280,290 + +0.4 280,290 + +1.1 280,293 - -0.2 280,295 - +0.4 280,295 - -0.1 280,295 - -0.1 280,335 + -0.1 280,336 - +0.5 280,338 + -1.4 280,339 - -1.3 280,361 + -2.2 280,362 - +0.3 280,387 + +1.1 280,388 - +0.1 280,396 - -0.9 280,427 + +0.5 280,429 + -1.0 280,430 - +0.3 280,432 - +1.7 280,437 - +0.6 280,438 + -1.6 280,438 + -1.6 280,455 - +1.3 280,480 + +0.8 280,484 + -0.7 280,485 - +0.1 280,485 - +1.0 280,494 + +1.6 280,495 - -2.2 280,502 + +0.3 280,503 - +0.7 280,519 + -0.8 280,563 - BACOVA_02813 0.12 +0.1 280,613 + BACOVA_02813 0.15 +0.2 280,618 + BACOVA_02813 0.15 -0.1 280,619 - BACOVA_02813 0.15 +0.6 280,619 - BACOVA_02813 0.15 -1.4 280,619 - BACOVA_02813 0.15 -1.2 280,651 - BACOVA_02813 0.18 +0.8 280,707 - BACOVA_02813 0.21 -0.5 280,707 - BACOVA_02813 0.21 -1.6 280,724 + BACOVA_02813 0.22 -1.2 280,725 - BACOVA_02813 0.23 +0.7 280,729 + BACOVA_02813 0.23 +1.0 280,729 + BACOVA_02813 0.23 +0.5 280,730 - BACOVA_02813 0.23 +0.8 280,730 - BACOVA_02813 0.23 +0.6 280,762 - BACOVA_02813 0.25 +2.0 280,806 - BACOVA_02813 0.28 +0.4 280,934 + BACOVA_02813 0.37 +0.1 280,935 - BACOVA_02813 0.37 -0.0 280,937 + BACOVA_02813 0.37 -1.8 280,937 + BACOVA_02813 0.37 +0.3 280,993 + BACOVA_02813 0.41 -1.5 281,071 - BACOVA_02813 0.46 +0.6 281,099 + BACOVA_02813 0.48 -0.9 281,099 + BACOVA_02813 0.48 +2.4 281,099 + BACOVA_02813 0.48 -0.5 281,100 - BACOVA_02813 0.48 -0.3 281,100 - BACOVA_02813 0.48 -0.3 281,100 - BACOVA_02813 0.48 -0.3 281,175 - BACOVA_02813 0.53 -0.3 281,193 + BACOVA_02813 0.54 -0.6 281,246 + BACOVA_02813 0.57 -0.3 281,247 - BACOVA_02813 0.58 +0.3 281,247 - BACOVA_02813 0.58 -0.6
Or see this region's nucleotide sequence