Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00720

Experiment: Locust bean gum 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00719 and BACOVA_00720 are separated by 171 nucleotidesBACOVA_00720 and BACOVA_00721 are separated by 134 nucleotides BACOVA_00719: BACOVA_00719 - phospholipase, patatin family, at 390,992 to 393,289 _00719 BACOVA_00720: BACOVA_00720 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 393,461 to 395,506 _00720 BACOVA_00721: BACOVA_00721 - ATPase family associated with various cellular activities (AAA), at 395,641 to 398,169 _00721 Position (kb) 393 394 395 396Strain fitness (log2 ratio) -2 -1 0 1 2at 392.485 kb on + strand, within BACOVA_00719at 392.580 kb on - strand, within BACOVA_00719at 392.591 kb on + strand, within BACOVA_00719at 392.593 kb on + strand, within BACOVA_00719at 392.593 kb on + strand, within BACOVA_00719at 392.594 kb on - strand, within BACOVA_00719at 392.644 kb on + strand, within BACOVA_00719at 392.645 kb on - strand, within BACOVA_00719at 392.645 kb on - strand, within BACOVA_00719at 392.646 kb on + strand, within BACOVA_00719at 392.646 kb on + strand, within BACOVA_00719at 392.647 kb on - strand, within BACOVA_00719at 392.647 kb on - strand, within BACOVA_00719at 392.647 kb on - strand, within BACOVA_00719at 392.647 kb on - strand, within BACOVA_00719at 392.651 kb on - strand, within BACOVA_00719at 392.651 kb on - strand, within BACOVA_00719at 392.662 kb on - strand, within BACOVA_00719at 392.669 kb on + strand, within BACOVA_00719at 392.679 kb on - strand, within BACOVA_00719at 392.693 kb on - strand, within BACOVA_00719at 392.768 kb on - strand, within BACOVA_00719at 392.772 kb on + strand, within BACOVA_00719at 392.772 kb on + strand, within BACOVA_00719at 392.850 kb on + strand, within BACOVA_00719at 392.850 kb on + strand, within BACOVA_00719at 392.853 kb on - strand, within BACOVA_00719at 392.918 kb on + strand, within BACOVA_00719at 392.994 kb on + strand, within BACOVA_00719at 392.994 kb on + strand, within BACOVA_00719at 392.995 kb on - strand, within BACOVA_00719at 392.996 kb on + strand, within BACOVA_00719at 393.059 kb on + strand, within BACOVA_00719at 393.059 kb on + strand, within BACOVA_00719at 393.059 kb on + strand, within BACOVA_00719at 393.059 kb on + strand, within BACOVA_00719at 393.090 kb on + strandat 393.090 kb on + strandat 393.209 kb on + strandat 393.213 kb on - strandat 393.213 kb on - strandat 393.222 kb on - strandat 393.247 kb on + strandat 393.248 kb on - strandat 393.257 kb on + strandat 393.257 kb on + strandat 393.335 kb on + strandat 393.336 kb on - strandat 393.336 kb on - strandat 393.338 kb on - strandat 393.339 kb on + strandat 393.340 kb on - strandat 393.397 kb on + strandat 393.398 kb on - strandat 393.435 kb on + strandat 393.436 kb on - strandat 393.479 kb on - strandat 393.494 kb on - strandat 393.566 kb on - strandat 393.707 kb on - strand, within BACOVA_00720at 393.786 kb on - strand, within BACOVA_00720at 393.871 kb on + strand, within BACOVA_00720at 393.898 kb on + strand, within BACOVA_00720at 393.899 kb on - strand, within BACOVA_00720at 393.900 kb on + strand, within BACOVA_00720at 393.901 kb on - strand, within BACOVA_00720at 394.132 kb on + strand, within BACOVA_00720at 394.133 kb on - strand, within BACOVA_00720at 394.141 kb on + strand, within BACOVA_00720at 394.146 kb on - strand, within BACOVA_00720at 394.151 kb on + strand, within BACOVA_00720at 394.204 kb on + strand, within BACOVA_00720at 394.205 kb on - strand, within BACOVA_00720at 394.206 kb on + strand, within BACOVA_00720at 394.206 kb on + strand, within BACOVA_00720at 394.207 kb on - strand, within BACOVA_00720at 394.243 kb on - strand, within BACOVA_00720at 394.243 kb on - strand, within BACOVA_00720at 394.322 kb on + strand, within BACOVA_00720at 394.323 kb on - strand, within BACOVA_00720at 394.387 kb on - strand, within BACOVA_00720at 394.433 kb on - strand, within BACOVA_00720at 394.457 kb on + strand, within BACOVA_00720at 394.549 kb on + strand, within BACOVA_00720at 394.562 kb on + strand, within BACOVA_00720at 394.566 kb on - strand, within BACOVA_00720at 394.619 kb on + strand, within BACOVA_00720at 394.620 kb on - strand, within BACOVA_00720at 394.623 kb on + strand, within BACOVA_00720at 394.623 kb on + strand, within BACOVA_00720at 394.625 kb on + strand, within BACOVA_00720at 394.626 kb on - strand, within BACOVA_00720at 394.626 kb on - strand, within BACOVA_00720at 394.626 kb on - strand, within BACOVA_00720at 394.657 kb on + strand, within BACOVA_00720at 394.769 kb on + strand, within BACOVA_00720at 394.769 kb on + strand, within BACOVA_00720at 394.778 kb on - strand, within BACOVA_00720at 394.780 kb on - strand, within BACOVA_00720at 394.851 kb on - strand, within BACOVA_00720at 394.852 kb on + strand, within BACOVA_00720at 394.875 kb on + strand, within BACOVA_00720at 394.960 kb on + strand, within BACOVA_00720at 395.003 kb on + strand, within BACOVA_00720at 395.004 kb on - strand, within BACOVA_00720at 395.011 kb on + strand, within BACOVA_00720at 395.048 kb on - strand, within BACOVA_00720at 395.103 kb on + strand, within BACOVA_00720at 395.110 kb on + strand, within BACOVA_00720at 395.111 kb on - strand, within BACOVA_00720at 395.141 kb on - strand, within BACOVA_00720at 395.141 kb on - strand, within BACOVA_00720at 395.197 kb on + strand, within BACOVA_00720at 395.197 kb on + strand, within BACOVA_00720at 395.200 kb on - strand, within BACOVA_00720at 395.200 kb on - strand, within BACOVA_00720at 395.218 kb on + strand, within BACOVA_00720at 395.218 kb on + strand, within BACOVA_00720at 395.219 kb on - strand, within BACOVA_00720at 395.235 kb on - strand, within BACOVA_00720at 395.255 kb on + strand, within BACOVA_00720at 395.300 kb on - strand, within BACOVA_00720at 395.330 kb on + strandat 395.362 kb on + strandat 395.362 kb on + strandat 395.396 kb on + strandat 395.412 kb on - strandat 395.412 kb on - strandat 395.455 kb on + strandat 395.510 kb on - strandat 395.637 kb on - strandat 395.637 kb on - strandat 396.117 kb on + strand, within BACOVA_00721at 396.299 kb on - strand, within BACOVA_00721at 396.399 kb on - strand, within BACOVA_00721at 396.430 kb on - strand, within BACOVA_00721at 396.449 kb on - strand, within BACOVA_00721

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Per-strain Table

Position Strand Gene LocusTag Fraction Locust bean gum 2.5 mg/ml (C)
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392,485 + BACOVA_00719 0.65 -1.3
392,580 - BACOVA_00719 0.69 -0.4
392,591 + BACOVA_00719 0.70 +2.3
392,593 + BACOVA_00719 0.70 -0.1
392,593 + BACOVA_00719 0.70 +0.2
392,594 - BACOVA_00719 0.70 +0.6
392,644 + BACOVA_00719 0.72 -1.2
392,645 - BACOVA_00719 0.72 +1.6
392,645 - BACOVA_00719 0.72 +0.9
392,646 + BACOVA_00719 0.72 -0.0
392,646 + BACOVA_00719 0.72 -1.1
392,647 - BACOVA_00719 0.72 -0.7
392,647 - BACOVA_00719 0.72 -1.9
392,647 - BACOVA_00719 0.72 +0.9
392,647 - BACOVA_00719 0.72 -0.9
392,651 - BACOVA_00719 0.72 -2.4
392,651 - BACOVA_00719 0.72 -0.5
392,662 - BACOVA_00719 0.73 -0.3
392,669 + BACOVA_00719 0.73 -0.4
392,679 - BACOVA_00719 0.73 -0.2
392,693 - BACOVA_00719 0.74 -0.7
392,768 - BACOVA_00719 0.77 -0.8
392,772 + BACOVA_00719 0.77 +0.3
392,772 + BACOVA_00719 0.77 -0.2
392,850 + BACOVA_00719 0.81 -0.2
392,850 + BACOVA_00719 0.81 +0.3
392,853 - BACOVA_00719 0.81 -0.3
392,918 + BACOVA_00719 0.84 -0.4
392,994 + BACOVA_00719 0.87 -0.6
392,994 + BACOVA_00719 0.87 -1.6
392,995 - BACOVA_00719 0.87 -0.1
392,996 + BACOVA_00719 0.87 +1.2
393,059 + BACOVA_00719 0.90 -1.9
393,059 + BACOVA_00719 0.90 +0.9
393,059 + BACOVA_00719 0.90 +0.2
393,059 + BACOVA_00719 0.90 -1.1
393,090 + -0.3
393,090 + +0.6
393,209 + -1.8
393,213 - +1.3
393,213 - +0.3
393,222 - +0.3
393,247 + +2.1
393,248 - -1.0
393,257 + -0.5
393,257 + -0.0
393,335 + +0.4
393,336 - +1.3
393,336 - +0.6
393,338 - +0.9
393,339 + -0.3
393,340 - +0.5
393,397 + +0.8
393,398 - -0.7
393,435 + +0.8
393,436 - +0.4
393,479 - +0.5
393,494 - +2.0
393,566 - +0.3
393,707 - BACOVA_00720 0.12 +0.4
393,786 - BACOVA_00720 0.16 +0.1
393,871 + BACOVA_00720 0.20 +0.0
393,898 + BACOVA_00720 0.21 +0.1
393,899 - BACOVA_00720 0.21 -1.1
393,900 + BACOVA_00720 0.21 +1.3
393,901 - BACOVA_00720 0.22 +0.1
394,132 + BACOVA_00720 0.33 +0.7
394,133 - BACOVA_00720 0.33 +0.0
394,141 + BACOVA_00720 0.33 +0.9
394,146 - BACOVA_00720 0.33 +0.9
394,151 + BACOVA_00720 0.34 +0.9
394,204 + BACOVA_00720 0.36 -1.3
394,205 - BACOVA_00720 0.36 +0.9
394,206 + BACOVA_00720 0.36 -0.1
394,206 + BACOVA_00720 0.36 -1.3
394,207 - BACOVA_00720 0.36 -0.1
394,243 - BACOVA_00720 0.38 -1.2
394,243 - BACOVA_00720 0.38 +0.9
394,322 + BACOVA_00720 0.42 +1.2
394,323 - BACOVA_00720 0.42 -0.3
394,387 - BACOVA_00720 0.45 -1.0
394,433 - BACOVA_00720 0.48 -0.9
394,457 + BACOVA_00720 0.49 +0.7
394,549 + BACOVA_00720 0.53 -0.1
394,562 + BACOVA_00720 0.54 +1.4
394,566 - BACOVA_00720 0.54 -0.1
394,619 + BACOVA_00720 0.57 +0.6
394,620 - BACOVA_00720 0.57 +0.2
394,623 + BACOVA_00720 0.57 -0.5
394,623 + BACOVA_00720 0.57 +0.9
394,625 + BACOVA_00720 0.57 +1.2
394,626 - BACOVA_00720 0.57 -1.2
394,626 - BACOVA_00720 0.57 +0.2
394,626 - BACOVA_00720 0.57 +0.3
394,657 + BACOVA_00720 0.58 +1.0
394,769 + BACOVA_00720 0.64 +1.3
394,769 + BACOVA_00720 0.64 -1.1
394,778 - BACOVA_00720 0.64 +0.7
394,780 - BACOVA_00720 0.64 +0.9
394,851 - BACOVA_00720 0.68 +0.9
394,852 + BACOVA_00720 0.68 +1.1
394,875 + BACOVA_00720 0.69 +1.9
394,960 + BACOVA_00720 0.73 -0.4
395,003 + BACOVA_00720 0.75 -0.7
395,004 - BACOVA_00720 0.75 -0.5
395,011 + BACOVA_00720 0.76 -0.1
395,048 - BACOVA_00720 0.78 -0.1
395,103 + BACOVA_00720 0.80 -1.0
395,110 + BACOVA_00720 0.81 -1.7
395,111 - BACOVA_00720 0.81 +0.4
395,141 - BACOVA_00720 0.82 +1.4
395,141 - BACOVA_00720 0.82 -0.7
395,197 + BACOVA_00720 0.85 +0.6
395,197 + BACOVA_00720 0.85 +1.2
395,200 - BACOVA_00720 0.85 +0.9
395,200 - BACOVA_00720 0.85 +0.2
395,218 + BACOVA_00720 0.86 +0.3
395,218 + BACOVA_00720 0.86 +1.9
395,219 - BACOVA_00720 0.86 -0.8
395,235 - BACOVA_00720 0.87 -0.2
395,255 + BACOVA_00720 0.88 -1.1
395,300 - BACOVA_00720 0.90 +1.1
395,330 + -0.4
395,362 + -0.7
395,362 + +1.1
395,396 + -0.1
395,412 - -1.7
395,412 - +0.9
395,455 + -0.9
395,510 - -0.5
395,637 - +1.2
395,637 - -0.3
396,117 + BACOVA_00721 0.19 +0.1
396,299 - BACOVA_00721 0.26 -0.7
396,399 - BACOVA_00721 0.30 +0.3
396,430 - BACOVA_00721 0.31 -1.1
396,449 - BACOVA_00721 0.32 -2.6

Or see this region's nucleotide sequence