Experiment: Locust bean gum 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_00176 and BACOVA_00177 overlap by 7 nucleotides BACOVA_00177 and BACOVA_00178 are separated by 98 nucleotides BACOVA_00178 and BACOVA_00179 are separated by 120 nucleotides
BACOVA_00176: BACOVA_00176 - hypothetical protein, at 501,996 to 502,277
_00176
BACOVA_00177: BACOVA_00177 - hypothetical protein, at 502,271 to 502,999
_00177
BACOVA_00178: BACOVA_00178 - magnesium-importing ATPase, at 503,098 to 505,749
_00178
BACOVA_00179: BACOVA_00179 - ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein, at 505,870 to 507,237
_00179
Position (kb) 503
504
505
506 Strain fitness (log2 ratio) -2
-1
0
1
2 at 502.112 kb on - strand, within BACOVA_00176 at 502.124 kb on - strand, within BACOVA_00176 at 502.124 kb on - strand, within BACOVA_00176 at 502.165 kb on - strand, within BACOVA_00176 at 502.165 kb on - strand, within BACOVA_00176 at 502.169 kb on - strand, within BACOVA_00176 at 502.191 kb on - strand, within BACOVA_00176 at 502.195 kb on - strand, within BACOVA_00176 at 502.195 kb on - strand, within BACOVA_00176 at 502.283 kb on + strand at 502.294 kb on + strand at 502.295 kb on - strand at 502.305 kb on + strand at 502.318 kb on - strand at 502.318 kb on - strand at 502.326 kb on + strand at 502.415 kb on - strand, within BACOVA_00177 at 502.449 kb on - strand, within BACOVA_00177 at 502.460 kb on - strand, within BACOVA_00177 at 502.461 kb on + strand, within BACOVA_00177 at 502.462 kb on - strand, within BACOVA_00177 at 502.462 kb on - strand, within BACOVA_00177 at 502.462 kb on - strand, within BACOVA_00177 at 502.491 kb on + strand, within BACOVA_00177 at 502.536 kb on + strand, within BACOVA_00177 at 502.536 kb on + strand, within BACOVA_00177 at 502.537 kb on - strand, within BACOVA_00177 at 502.537 kb on - strand, within BACOVA_00177 at 502.571 kb on + strand, within BACOVA_00177 at 502.572 kb on - strand, within BACOVA_00177 at 502.579 kb on - strand, within BACOVA_00177 at 502.579 kb on - strand, within BACOVA_00177 at 502.579 kb on - strand, within BACOVA_00177 at 502.581 kb on + strand, within BACOVA_00177 at 502.581 kb on + strand, within BACOVA_00177 at 502.582 kb on - strand, within BACOVA_00177 at 502.591 kb on + strand, within BACOVA_00177 at 502.592 kb on - strand, within BACOVA_00177 at 502.615 kb on + strand, within BACOVA_00177 at 502.616 kb on - strand, within BACOVA_00177 at 502.619 kb on - strand, within BACOVA_00177 at 502.619 kb on - strand, within BACOVA_00177 at 502.619 kb on - strand, within BACOVA_00177 at 502.628 kb on + strand, within BACOVA_00177 at 502.628 kb on + strand, within BACOVA_00177 at 502.628 kb on + strand, within BACOVA_00177 at 502.631 kb on - strand, within BACOVA_00177 at 502.631 kb on - strand, within BACOVA_00177 at 502.688 kb on - strand, within BACOVA_00177 at 502.734 kb on + strand, within BACOVA_00177 at 502.856 kb on - strand, within BACOVA_00177 at 502.866 kb on + strand, within BACOVA_00177 at 502.886 kb on + strand, within BACOVA_00177 at 502.892 kb on - strand, within BACOVA_00177 at 502.933 kb on - strand at 502.955 kb on - strand at 502.955 kb on - strand at 502.968 kb on + strand at 502.981 kb on - strand at 503.001 kb on - strand at 503.025 kb on + strand at 503.026 kb on - strand at 503.036 kb on - strand at 503.055 kb on - strand at 503.089 kb on + strand at 503.099 kb on + strand at 503.126 kb on + strand at 503.127 kb on - strand at 503.160 kb on - strand at 503.254 kb on - strand at 503.254 kb on - strand at 503.254 kb on - strand at 503.257 kb on + strand at 503.258 kb on - strand at 503.258 kb on - strand at 503.269 kb on + strand at 503.270 kb on - strand at 503.336 kb on - strand at 503.362 kb on + strand at 503.425 kb on - strand, within BACOVA_00178 at 503.425 kb on - strand, within BACOVA_00178 at 503.428 kb on + strand, within BACOVA_00178 at 503.448 kb on - strand, within BACOVA_00178 at 503.454 kb on + strand, within BACOVA_00178 at 503.455 kb on - strand, within BACOVA_00178 at 503.457 kb on + strand, within BACOVA_00178 at 503.458 kb on - strand, within BACOVA_00178 at 503.486 kb on + strand, within BACOVA_00178 at 503.486 kb on + strand, within BACOVA_00178 at 503.487 kb on - strand, within BACOVA_00178 at 503.504 kb on - strand, within BACOVA_00178 at 503.581 kb on + strand, within BACOVA_00178 at 503.582 kb on - strand, within BACOVA_00178 at 503.608 kb on + strand, within BACOVA_00178 at 503.609 kb on - strand, within BACOVA_00178 at 503.609 kb on - strand, within BACOVA_00178 at 503.615 kb on - strand, within BACOVA_00178 at 503.671 kb on - strand, within BACOVA_00178 at 503.705 kb on + strand, within BACOVA_00178 at 503.706 kb on - strand, within BACOVA_00178 at 503.709 kb on + strand, within BACOVA_00178 at 503.709 kb on + strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.710 kb on - strand, within BACOVA_00178 at 503.759 kb on - strand, within BACOVA_00178 at 503.785 kb on - strand, within BACOVA_00178 at 503.788 kb on - strand, within BACOVA_00178 at 503.809 kb on - strand, within BACOVA_00178 at 503.830 kb on + strand, within BACOVA_00178 at 503.830 kb on + strand, within BACOVA_00178 at 503.831 kb on - strand, within BACOVA_00178 at 503.832 kb on + strand, within BACOVA_00178 at 503.832 kb on + strand, within BACOVA_00178 at 503.833 kb on - strand, within BACOVA_00178 at 503.833 kb on - strand, within BACOVA_00178 at 503.833 kb on - strand, within BACOVA_00178 at 503.851 kb on + strand, within BACOVA_00178 at 503.851 kb on + strand, within BACOVA_00178 at 503.895 kb on + strand, within BACOVA_00178 at 503.938 kb on + strand, within BACOVA_00178 at 504.124 kb on + strand, within BACOVA_00178 at 504.179 kb on + strand, within BACOVA_00178 at 504.222 kb on + strand, within BACOVA_00178 at 504.469 kb on + strand, within BACOVA_00178 at 504.469 kb on + strand, within BACOVA_00178 at 504.470 kb on - strand, within BACOVA_00178 at 504.523 kb on + strand, within BACOVA_00178 at 504.524 kb on - strand, within BACOVA_00178 at 504.524 kb on - strand, within BACOVA_00178 at 504.576 kb on - strand, within BACOVA_00178 at 504.587 kb on + strand, within BACOVA_00178 at 504.588 kb on - strand, within BACOVA_00178 at 504.588 kb on - strand, within BACOVA_00178 at 504.609 kb on + strand, within BACOVA_00178 at 504.610 kb on - strand, within BACOVA_00178 at 504.948 kb on + strand, within BACOVA_00178 at 504.949 kb on - strand, within BACOVA_00178 at 505.060 kb on + strand, within BACOVA_00178 at 505.060 kb on + strand, within BACOVA_00178 at 505.061 kb on - strand, within BACOVA_00178 at 505.068 kb on + strand, within BACOVA_00178 at 505.069 kb on - strand, within BACOVA_00178 at 505.077 kb on + strand, within BACOVA_00178 at 505.079 kb on + strand, within BACOVA_00178 at 505.086 kb on + strand, within BACOVA_00178 at 505.087 kb on - strand, within BACOVA_00178 at 505.200 kb on + strand, within BACOVA_00178 at 505.395 kb on + strand, within BACOVA_00178 at 505.425 kb on + strand, within BACOVA_00178 at 505.425 kb on + strand, within BACOVA_00178 at 505.468 kb on + strand, within BACOVA_00178 at 505.468 kb on + strand, within BACOVA_00178 at 505.469 kb on - strand, within BACOVA_00178 at 505.486 kb on + strand at 505.487 kb on - strand at 505.487 kb on - strand at 505.527 kb on + strand at 505.528 kb on - strand at 505.539 kb on + strand at 505.573 kb on + strand at 505.715 kb on + strand at 505.745 kb on - strand at 505.839 kb on + strand at 505.839 kb on + strand at 505.871 kb on + strand at 505.875 kb on + strand at 505.930 kb on - strand at 505.974 kb on + strand at 505.978 kb on + strand at 505.978 kb on + strand at 505.979 kb on - strand at 505.979 kb on - strand at 506.029 kb on - strand, within BACOVA_00179 at 506.044 kb on - strand, within BACOVA_00179 at 506.063 kb on - strand, within BACOVA_00179 at 506.063 kb on - strand, within BACOVA_00179 at 506.106 kb on - strand, within BACOVA_00179 at 506.152 kb on - strand, within BACOVA_00179 at 506.152 kb on - strand, within BACOVA_00179 at 506.189 kb on + strand, within BACOVA_00179 at 506.190 kb on - strand, within BACOVA_00179 at 506.190 kb on - strand, within BACOVA_00179 at 506.194 kb on - strand, within BACOVA_00179 at 506.194 kb on - strand, within BACOVA_00179 at 506.217 kb on + strand, within BACOVA_00179 at 506.217 kb on + strand, within BACOVA_00179 at 506.242 kb on + strand, within BACOVA_00179 at 506.243 kb on - strand, within BACOVA_00179 at 506.243 kb on - strand, within BACOVA_00179 at 506.243 kb on - strand, within BACOVA_00179 at 506.245 kb on + strand, within BACOVA_00179 at 506.245 kb on + strand, within BACOVA_00179 at 506.246 kb on - strand, within BACOVA_00179 at 506.275 kb on + strand, within BACOVA_00179 at 506.275 kb on + strand, within BACOVA_00179 at 506.276 kb on - strand, within BACOVA_00179 at 506.424 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.428 kb on + strand, within BACOVA_00179 at 506.502 kb on + strand, within BACOVA_00179 at 506.502 kb on + strand, within BACOVA_00179 at 506.506 kb on + strand, within BACOVA_00179 at 506.518 kb on + strand, within BACOVA_00179 at 506.519 kb on - strand, within BACOVA_00179 at 506.524 kb on - strand, within BACOVA_00179 at 506.637 kb on + strand, within BACOVA_00179 at 506.682 kb on + strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.683 kb on - strand, within BACOVA_00179 at 506.717 kb on + strand, within BACOVA_00179 at 506.718 kb on - strand, within BACOVA_00179
Per-strain Table
Position Strand Gene LocusTag Fraction Locust bean gum 2.5 mg/ml (C) remove 502,112 - BACOVA_00176 0.41 -1.4 502,124 - BACOVA_00176 0.45 +0.7 502,124 - BACOVA_00176 0.45 +1.6 502,165 - BACOVA_00176 0.60 -0.3 502,165 - BACOVA_00176 0.60 -1.4 502,169 - BACOVA_00176 0.61 -0.7 502,191 - BACOVA_00176 0.69 +0.4 502,195 - BACOVA_00176 0.71 -0.4 502,195 - BACOVA_00176 0.71 +0.9 502,283 + +0.2 502,294 + -0.0 502,295 - +0.9 502,305 + +1.1 502,318 - -0.7 502,318 - +0.6 502,326 + +0.2 502,415 - BACOVA_00177 0.20 -0.4 502,449 - BACOVA_00177 0.24 +0.9 502,460 - BACOVA_00177 0.26 +0.9 502,461 + BACOVA_00177 0.26 +0.3 502,462 - BACOVA_00177 0.26 -1.0 502,462 - BACOVA_00177 0.26 -2.1 502,462 - BACOVA_00177 0.26 +0.7 502,491 + BACOVA_00177 0.30 +0.2 502,536 + BACOVA_00177 0.36 -1.3 502,536 + BACOVA_00177 0.36 -0.1 502,537 - BACOVA_00177 0.36 -0.8 502,537 - BACOVA_00177 0.36 +0.8 502,571 + BACOVA_00177 0.41 -0.4 502,572 - BACOVA_00177 0.41 -1.4 502,579 - BACOVA_00177 0.42 -2.5 502,579 - BACOVA_00177 0.42 -0.7 502,579 - BACOVA_00177 0.42 -0.4 502,581 + BACOVA_00177 0.43 -1.2 502,581 + BACOVA_00177 0.43 +1.3 502,582 - BACOVA_00177 0.43 -0.2 502,591 + BACOVA_00177 0.44 -0.4 502,592 - BACOVA_00177 0.44 +1.3 502,615 + BACOVA_00177 0.47 -0.9 502,616 - BACOVA_00177 0.47 +0.7 502,619 - BACOVA_00177 0.48 +0.9 502,619 - BACOVA_00177 0.48 -0.4 502,619 - BACOVA_00177 0.48 -0.6 502,628 + BACOVA_00177 0.49 +1.2 502,628 + BACOVA_00177 0.49 +0.1 502,628 + BACOVA_00177 0.49 -1.3 502,631 - BACOVA_00177 0.49 -1.5 502,631 - BACOVA_00177 0.49 -1.0 502,688 - BACOVA_00177 0.57 +0.2 502,734 + BACOVA_00177 0.64 +0.5 502,856 - BACOVA_00177 0.80 -2.6 502,866 + BACOVA_00177 0.82 -0.1 502,886 + BACOVA_00177 0.84 -1.2 502,892 - BACOVA_00177 0.85 -1.7 502,933 - -1.2 502,955 - -1.1 502,955 - -0.4 502,968 + -0.7 502,981 - +0.4 503,001 - -1.1 503,025 + -1.8 503,026 - +0.9 503,036 - -0.4 503,055 - -1.1 503,089 + +0.4 503,099 + -0.1 503,126 + -0.6 503,127 - +1.2 503,160 - +0.6 503,254 - +0.6 503,254 - -1.7 503,254 - -1.7 503,257 + +1.6 503,258 - +0.2 503,258 - +0.9 503,269 + -1.1 503,270 - -0.0 503,336 - -1.1 503,362 + -0.1 503,425 - BACOVA_00178 0.12 +0.2 503,425 - BACOVA_00178 0.12 +1.2 503,428 + BACOVA_00178 0.12 -0.2 503,448 - BACOVA_00178 0.13 -0.7 503,454 + BACOVA_00178 0.13 -0.7 503,455 - BACOVA_00178 0.13 -0.1 503,457 + BACOVA_00178 0.14 +0.2 503,458 - BACOVA_00178 0.14 +1.9 503,486 + BACOVA_00178 0.15 -0.3 503,486 + BACOVA_00178 0.15 +1.6 503,487 - BACOVA_00178 0.15 +0.6 503,504 - BACOVA_00178 0.15 +1.7 503,581 + BACOVA_00178 0.18 -1.1 503,582 - BACOVA_00178 0.18 +0.3 503,608 + BACOVA_00178 0.19 +0.6 503,609 - BACOVA_00178 0.19 +0.5 503,609 - BACOVA_00178 0.19 -0.6 503,615 - BACOVA_00178 0.19 +1.4 503,671 - BACOVA_00178 0.22 -1.2 503,705 + BACOVA_00178 0.23 +1.1 503,706 - BACOVA_00178 0.23 -0.7 503,709 + BACOVA_00178 0.23 -1.3 503,709 + BACOVA_00178 0.23 -2.3 503,710 - BACOVA_00178 0.23 +0.6 503,710 - BACOVA_00178 0.23 -1.3 503,710 - BACOVA_00178 0.23 +0.9 503,710 - BACOVA_00178 0.23 +0.6 503,759 - BACOVA_00178 0.25 +0.2 503,785 - BACOVA_00178 0.26 +0.2 503,788 - BACOVA_00178 0.26 -0.5 503,809 - BACOVA_00178 0.27 -1.2 503,830 + BACOVA_00178 0.28 +0.2 503,830 + BACOVA_00178 0.28 -0.1 503,831 - BACOVA_00178 0.28 -0.2 503,832 + BACOVA_00178 0.28 +2.5 503,832 + BACOVA_00178 0.28 -1.4 503,833 - BACOVA_00178 0.28 -0.2 503,833 - BACOVA_00178 0.28 +1.3 503,833 - BACOVA_00178 0.28 +1.1 503,851 + BACOVA_00178 0.28 +0.0 503,851 + BACOVA_00178 0.28 +0.2 503,895 + BACOVA_00178 0.30 -1.3 503,938 + BACOVA_00178 0.32 -0.7 504,124 + BACOVA_00178 0.39 -1.4 504,179 + BACOVA_00178 0.41 +0.6 504,222 + BACOVA_00178 0.42 -1.6 504,469 + BACOVA_00178 0.52 +0.5 504,469 + BACOVA_00178 0.52 -0.3 504,470 - BACOVA_00178 0.52 -1.1 504,523 + BACOVA_00178 0.54 -0.6 504,524 - BACOVA_00178 0.54 -0.3 504,524 - BACOVA_00178 0.54 +0.4 504,576 - BACOVA_00178 0.56 -1.4 504,587 + BACOVA_00178 0.56 -1.4 504,588 - BACOVA_00178 0.56 +0.1 504,588 - BACOVA_00178 0.56 -0.7 504,609 + BACOVA_00178 0.57 +0.2 504,610 - BACOVA_00178 0.57 +0.9 504,948 + BACOVA_00178 0.70 +1.1 504,949 - BACOVA_00178 0.70 -1.4 505,060 + BACOVA_00178 0.74 -0.7 505,060 + BACOVA_00178 0.74 -1.1 505,061 - BACOVA_00178 0.74 -1.1 505,068 + BACOVA_00178 0.74 -0.4 505,069 - BACOVA_00178 0.74 -0.4 505,077 + BACOVA_00178 0.75 -0.4 505,079 + BACOVA_00178 0.75 +0.0 505,086 + BACOVA_00178 0.75 -1.3 505,087 - BACOVA_00178 0.75 -1.1 505,200 + BACOVA_00178 0.79 +0.9 505,395 + BACOVA_00178 0.87 +0.9 505,425 + BACOVA_00178 0.88 -0.6 505,425 + BACOVA_00178 0.88 -0.1 505,468 + BACOVA_00178 0.89 -0.3 505,468 + BACOVA_00178 0.89 -1.1 505,469 - BACOVA_00178 0.89 -0.1 505,486 + +0.2 505,487 - +0.1 505,487 - +1.6 505,527 + +0.9 505,528 - +0.4 505,539 + +0.6 505,573 + -2.6 505,715 + +0.1 505,745 - +0.7 505,839 + +1.5 505,839 + -0.4 505,871 + +0.5 505,875 + +2.3 505,930 - -0.1 505,974 + +0.6 505,978 + -0.8 505,978 + +1.1 505,979 - +1.9 505,979 - -0.5 506,029 - BACOVA_00179 0.12 -0.7 506,044 - BACOVA_00179 0.13 -0.9 506,063 - BACOVA_00179 0.14 +0.1 506,063 - BACOVA_00179 0.14 +0.2 506,106 - BACOVA_00179 0.17 -0.2 506,152 - BACOVA_00179 0.21 -0.1 506,152 - BACOVA_00179 0.21 +0.3 506,189 + BACOVA_00179 0.23 +1.2 506,190 - BACOVA_00179 0.23 -0.4 506,190 - BACOVA_00179 0.23 -0.6 506,194 - BACOVA_00179 0.24 -0.2 506,194 - BACOVA_00179 0.24 +0.4 506,217 + BACOVA_00179 0.25 +0.0 506,217 + BACOVA_00179 0.25 +0.7 506,242 + BACOVA_00179 0.27 -1.1 506,243 - BACOVA_00179 0.27 -0.5 506,243 - BACOVA_00179 0.27 -1.2 506,243 - BACOVA_00179 0.27 +0.9 506,245 + BACOVA_00179 0.27 -0.6 506,245 + BACOVA_00179 0.27 -0.8 506,246 - BACOVA_00179 0.27 -1.0 506,275 + BACOVA_00179 0.30 +1.1 506,275 + BACOVA_00179 0.30 +0.9 506,276 - BACOVA_00179 0.30 -1.2 506,424 + BACOVA_00179 0.40 +1.5 506,428 + BACOVA_00179 0.41 -1.0 506,428 + BACOVA_00179 0.41 -0.5 506,428 + BACOVA_00179 0.41 +0.6 506,428 + BACOVA_00179 0.41 -1.1 506,502 + BACOVA_00179 0.46 -1.4 506,502 + BACOVA_00179 0.46 +0.8 506,506 + BACOVA_00179 0.46 +0.9 506,518 + BACOVA_00179 0.47 +0.4 506,519 - BACOVA_00179 0.47 -1.1 506,524 - BACOVA_00179 0.48 +0.1 506,637 + BACOVA_00179 0.56 -0.9 506,682 + BACOVA_00179 0.59 -0.1 506,683 - BACOVA_00179 0.59 +0.3 506,683 - BACOVA_00179 0.59 -2.1 506,683 - BACOVA_00179 0.59 -1.2 506,683 - BACOVA_00179 0.59 -1.7 506,683 - BACOVA_00179 0.59 -1.1 506,717 + BACOVA_00179 0.62 -0.5 506,718 - BACOVA_00179 0.62 -2.7
Or see this region's nucleotide sequence