Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00867

Experiment: polygalacturonic 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	polygalacturonic 2.5 mg/ml (C)
122,273	-		BACOVA_00866	0.75	+0.6
122,273	-		BACOVA_00866	0.75	-0.1
122,326	-		BACOVA_00866	0.76	+0.5
122,387	+		BACOVA_00866	0.78	+0.3
122,387	+		BACOVA_00866	0.78	+1.1
122,387	+		BACOVA_00866	0.78	+0.3
122,388	-		BACOVA_00866	0.78	+0.5
122,446	-		BACOVA_00866	0.80	+0.3
122,460	+		BACOVA_00866	0.81	+0.2
122,460	+		BACOVA_00866	0.81	+1.2
122,460	+		BACOVA_00866	0.81	+1.3
122,514	+		BACOVA_00866	0.82	-0.0
122,515	-		BACOVA_00866	0.82	+0.3
122,518	+		BACOVA_00866	0.83	+1.3
122,519	-		BACOVA_00866	0.83	+1.6
122,544	-		BACOVA_00866	0.83	+1.8
122,544	-		BACOVA_00866	0.83	+1.1
122,579	+		BACOVA_00866	0.85	+1.8
122,580	-		BACOVA_00866	0.85	+0.8
122,709	-		BACOVA_00866	0.89	+0.5
122,728	+		BACOVA_00866	0.89	+0.5
122,728	+		BACOVA_00866	0.89	+0.5
122,733	+		BACOVA_00866	0.89	+1.1
122,734	-		BACOVA_00866	0.89	+1.7
122,734	-		BACOVA_00866	0.89	+0.8
122,742	+		BACOVA_00866	0.90	+0.9
122,743	-		BACOVA_00866	0.90	+0.9
122,759	+				+0.1
122,760	-				+0.9
122,783	+				+1.1
122,783	+				-0.2
122,784	-				+0.8
122,784	-				+0.2
122,784	-				-0.6
122,830	-				+1.0
122,844	+				-0.4
122,844	+				-0.1
122,845	-				+2.0
122,845	-				-0.3
122,925	+				+0.3
122,926	-				+1.4
123,001	+				+0.3
123,002	-				-1.2
123,003	+				-2.2
123,004	-				+0.7
123,007	-				+1.2
123,007	-				+0.1
123,008	+				+0.1
123,009	-				+0.6
123,042	+				-0.5
123,096	-				-0.1
123,096	-				-0.2
123,096	-				+0.1
123,154	+				-0.9
123,159	+				-0.5
123,160	-				-1.7
123,177	+				+0.2
123,178	-				-0.9
123,198	-				+0.3
123,201	+				-3.6
123,202	-				-0.4
123,203	+				-1.1
123,240	+				+0.2
123,240	-				+0.4
123,240	-				+0.1
123,312	+				-0.1
123,313	-				-0.1
123,403	+		BACOVA_00867	0.16	-0.4
123,403	+		BACOVA_00867	0.16	-0.5
123,403	+		BACOVA_00867	0.16	+0.3
123,404	-		BACOVA_00867	0.17	+0.5
123,423	+		BACOVA_00867	0.18	+0.2
123,424	-		BACOVA_00867	0.18	+1.1
123,442	-		BACOVA_00867	0.20	+1.1
123,471	+		BACOVA_00867	0.23	-0.3
123,534	-		BACOVA_00867	0.28	+0.1
123,578	+		BACOVA_00867	0.32	-0.2
123,578	+		BACOVA_00867	0.32	-0.9
123,628	+		BACOVA_00867	0.37	-0.7
123,644	+		BACOVA_00867	0.38	-0.5
123,645	-		BACOVA_00867	0.38	+1.2
123,645	-		BACOVA_00867	0.38	+1.7
123,647	-		BACOVA_00867	0.38	-2.6
123,698	-		BACOVA_00867	0.43	+0.2
123,709	-		BACOVA_00867	0.44	+0.8
123,741	+		BACOVA_00867	0.47	+0.5
123,742	-		BACOVA_00867	0.47	-1.0
123,745	+		BACOVA_00867	0.47	-0.8
123,746	-		BACOVA_00867	0.47	-0.0
123,774	-		BACOVA_00867	0.50	+0.1
123,778	-		BACOVA_00867	0.50	+0.8
123,795	-		BACOVA_00867	0.52	-1.0
123,797	-		BACOVA_00867	0.52	+0.1
123,799	+		BACOVA_00867	0.52	-0.5
123,799	+		BACOVA_00867	0.52	-0.3
123,800	-		BACOVA_00867	0.52	+0.6
123,800	-		BACOVA_00867	0.52	+0.8
123,800	-		BACOVA_00867	0.52	+0.8
123,800	-		BACOVA_00867	0.52	+0.2
123,873	+		BACOVA_00867	0.59	-0.7
123,874	-		BACOVA_00867	0.59	-0.4
123,879	+		BACOVA_00867	0.59	-0.0
123,879	+		BACOVA_00867	0.59	+2.1
123,924	+		BACOVA_00867	0.63	-0.2
123,924	+		BACOVA_00867	0.63	-0.2
123,925	-		BACOVA_00867	0.64	-0.2
124,004	+		BACOVA_00867	0.71	-0.7
124,082	-		BACOVA_00867	0.78	+1.1
124,175	-		BACOVA_00867	0.86	-0.8
124,192	+		BACOVA_00867	0.88	-1.2
124,196	+		BACOVA_00867	0.88	+1.7
124,196	+		BACOVA_00867	0.88	-0.0
124,197	-		BACOVA_00867	0.88	+0.4
124,222	+				+0.7
124,229	-				-0.3
124,250	+				+0.3
124,280	-				-0.8
124,280	-				+0.6
124,313	-				-0.9
124,378	+		BACOVA_00869	0.34	-1.4
124,438	-				-0.7
124,491	-				+0.1
124,491	-				-0.9
124,491	-				+1.1
124,491	-				-3.1
124,508	-				-0.6
124,548	+				-0.5
124,549	-				-0.1
124,552	-				-1.9
124,588	+				-0.7
124,589	-				-1.5
124,595	+				-0.5
124,606	+				-0.8
124,654	-				-1.4
124,727	-		BACOVA_00868	0.13	-1.5
124,830	-		BACOVA_00868	0.17	-1.5
124,964	-		BACOVA_00868	0.23	+0.1
124,988	+		BACOVA_00868	0.24	-2.1
124,990	+		BACOVA_00868	0.24	-1.7
124,990	+		BACOVA_00868	0.24	-1.1
125,093	-		BACOVA_00868	0.28	+0.1
125,093	-		BACOVA_00868	0.28	-0.2
125,134	+		BACOVA_00868	0.30	-1.2
125,184	+		BACOVA_00868	0.32	-0.1
125,210	-		BACOVA_00868	0.33	-0.7
125,290	+		BACOVA_00868	0.36	+0.1
125,290	+		BACOVA_00868	0.36	-1.6
125,290	+		BACOVA_00868	0.36	-1.2
125,291	-		BACOVA_00868	0.36	-1.7
125,302	+		BACOVA_00868	0.37	-1.9