Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05246

Experiment: b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05245 and BACOVA_05246 overlap by 8 nucleotidesBACOVA_05246 and BACOVA_05247 are separated by 18 nucleotidesBACOVA_05247 and BACOVA_05248 are separated by 72 nucleotidesBACOVA_05248 and BACOVA_05249 are separated by 14 nucleotides BACOVA_05245: BACOVA_05245 - 4Fe-4S binding domain protein, at 744,716 to 745,729 _05245 BACOVA_05246: BACOVA_05246 - oxidoreductase NAD-binding domain protein, at 745,722 to 746,564 _05246 BACOVA_05247: BACOVA_05247 - hypothetical protein, at 746,583 to 746,708 _05247 BACOVA_05248: BACOVA_05248 - hypothetical protein, at 746,781 to 747,242 _05248 BACOVA_05249: BACOVA_05249 - sodium ion-translocating decarboxylase, beta subunit, at 747,257 to 748,471 _05249 Position (kb) 745 746 747Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 744.730 kb on + strandat 744.819 kb on + strand, within BACOVA_05245at 744.820 kb on - strand, within BACOVA_05245at 744.852 kb on + strand, within BACOVA_05245at 744.863 kb on + strand, within BACOVA_05245at 744.864 kb on - strand, within BACOVA_05245at 744.926 kb on + strand, within BACOVA_05245at 744.970 kb on + strand, within BACOVA_05245at 744.970 kb on + strand, within BACOVA_05245at 744.975 kb on + strand, within BACOVA_05245at 745.059 kb on - strand, within BACOVA_05245at 745.060 kb on + strand, within BACOVA_05245at 745.061 kb on - strand, within BACOVA_05245at 745.071 kb on + strand, within BACOVA_05245at 745.071 kb on + strand, within BACOVA_05245at 745.101 kb on + strand, within BACOVA_05245at 745.102 kb on - strand, within BACOVA_05245at 745.111 kb on - strand, within BACOVA_05245at 745.145 kb on - strand, within BACOVA_05245at 745.280 kb on - strand, within BACOVA_05245at 745.300 kb on + strand, within BACOVA_05245at 745.310 kb on + strand, within BACOVA_05245at 745.311 kb on - strand, within BACOVA_05245at 745.311 kb on - strand, within BACOVA_05245at 745.346 kb on - strand, within BACOVA_05245at 745.434 kb on - strand, within BACOVA_05245at 745.535 kb on - strand, within BACOVA_05245at 745.543 kb on + strand, within BACOVA_05245at 745.544 kb on - strand, within BACOVA_05245at 745.603 kb on + strand, within BACOVA_05245at 745.604 kb on - strand, within BACOVA_05245at 745.613 kb on + strand, within BACOVA_05245at 745.614 kb on - strand, within BACOVA_05245at 745.615 kb on + strand, within BACOVA_05245at 745.616 kb on - strand, within BACOVA_05245at 745.685 kb on - strandat 745.685 kb on - strandat 745.690 kb on + strandat 745.692 kb on + strandat 745.692 kb on + strandat 745.693 kb on - strandat 745.704 kb on + strandat 745.705 kb on - strandat 745.742 kb on - strandat 745.743 kb on + strandat 745.743 kb on + strandat 745.744 kb on - strandat 745.744 kb on - strandat 745.872 kb on + strand, within BACOVA_05246at 745.935 kb on + strand, within BACOVA_05246at 745.937 kb on + strand, within BACOVA_05246at 745.946 kb on + strand, within BACOVA_05246at 745.946 kb on + strand, within BACOVA_05246at 746.087 kb on + strand, within BACOVA_05246at 746.090 kb on - strand, within BACOVA_05246at 746.090 kb on - strand, within BACOVA_05246at 746.153 kb on + strand, within BACOVA_05246at 746.153 kb on + strand, within BACOVA_05246at 746.155 kb on + strand, within BACOVA_05246at 746.156 kb on - strand, within BACOVA_05246at 746.198 kb on + strand, within BACOVA_05246at 746.199 kb on - strand, within BACOVA_05246at 746.199 kb on - strand, within BACOVA_05246at 746.250 kb on - strand, within BACOVA_05246at 746.250 kb on - strand, within BACOVA_05246at 746.342 kb on + strand, within BACOVA_05246at 746.343 kb on - strand, within BACOVA_05246at 746.354 kb on - strand, within BACOVA_05246at 746.396 kb on - strand, within BACOVA_05246at 746.408 kb on - strand, within BACOVA_05246at 746.431 kb on - strand, within BACOVA_05246at 746.433 kb on - strand, within BACOVA_05246at 746.483 kb on + strandat 746.522 kb on - strandat 746.546 kb on + strandat 746.546 kb on + strandat 746.547 kb on - strandat 746.547 kb on - strandat 746.562 kb on + strandat 746.563 kb on - strandat 746.563 kb on - strandat 746.618 kb on + strand, within BACOVA_05247at 746.639 kb on + strand, within BACOVA_05247at 746.639 kb on + strand, within BACOVA_05247at 746.641 kb on + strand, within BACOVA_05247at 746.643 kb on + strand, within BACOVA_05247at 746.643 kb on + strand, within BACOVA_05247at 746.644 kb on - strand, within BACOVA_05247at 746.666 kb on - strand, within BACOVA_05247at 746.687 kb on + strand, within BACOVA_05247at 746.725 kb on - strandat 746.733 kb on - strandat 746.733 kb on - strandat 746.780 kb on + strandat 746.789 kb on - strandat 746.802 kb on + strandat 746.805 kb on - strandat 746.810 kb on + strandat 746.810 kb on + strandat 746.811 kb on - strandat 746.822 kb on - strandat 746.822 kb on - strandat 746.825 kb on - strandat 746.831 kb on + strand, within BACOVA_05248at 746.832 kb on - strand, within BACOVA_05248at 746.888 kb on + strand, within BACOVA_05248at 746.926 kb on - strand, within BACOVA_05248at 746.927 kb on + strand, within BACOVA_05248at 747.008 kb on - strand, within BACOVA_05248at 747.011 kb on + strand, within BACOVA_05248at 747.011 kb on + strand, within BACOVA_05248at 747.011 kb on + strand, within BACOVA_05248at 747.011 kb on + strand, within BACOVA_05248at 747.012 kb on - strand, within BACOVA_05248at 747.051 kb on + strand, within BACOVA_05248at 747.094 kb on - strand, within BACOVA_05248at 747.096 kb on + strand, within BACOVA_05248at 747.096 kb on + strand, within BACOVA_05248at 747.134 kb on - strand, within BACOVA_05248at 747.141 kb on + strand, within BACOVA_05248at 747.141 kb on + strand, within BACOVA_05248at 747.144 kb on + strand, within BACOVA_05248at 747.144 kb on + strand, within BACOVA_05248at 747.145 kb on - strand, within BACOVA_05248at 747.228 kb on - strandat 747.228 kb on - strandat 747.240 kb on + strandat 747.241 kb on - strandat 747.251 kb on + strandat 747.252 kb on - strandat 747.292 kb on + strandat 747.292 kb on + strandat 747.299 kb on - strandat 747.372 kb on - strandat 747.388 kb on + strand, within BACOVA_05249at 747.401 kb on - strand, within BACOVA_05249at 747.432 kb on + strand, within BACOVA_05249at 747.436 kb on + strand, within BACOVA_05249at 747.437 kb on - strand, within BACOVA_05249at 747.437 kb on - strand, within BACOVA_05249at 747.520 kb on - strand, within BACOVA_05249at 747.537 kb on + strand, within BACOVA_05249

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Per-strain Table

Position Strand Gene LocusTag Fraction b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)
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744,730 + -0.4
744,819 + BACOVA_05245 0.10 -1.2
744,820 - BACOVA_05245 0.10 -1.9
744,852 + BACOVA_05245 0.13 -1.6
744,863 + BACOVA_05245 0.14 -1.9
744,864 - BACOVA_05245 0.15 -1.6
744,926 + BACOVA_05245 0.21 -0.6
744,970 + BACOVA_05245 0.25 -0.4
744,970 + BACOVA_05245 0.25 -1.0
744,975 + BACOVA_05245 0.26 -1.7
745,059 - BACOVA_05245 0.34 -1.7
745,060 + BACOVA_05245 0.34 +0.1
745,061 - BACOVA_05245 0.34 +1.4
745,071 + BACOVA_05245 0.35 -0.9
745,071 + BACOVA_05245 0.35 -0.9
745,101 + BACOVA_05245 0.38 -1.9
745,102 - BACOVA_05245 0.38 -0.9
745,111 - BACOVA_05245 0.39 +0.3
745,145 - BACOVA_05245 0.42 +0.6
745,280 - BACOVA_05245 0.56 -0.1
745,300 + BACOVA_05245 0.58 -0.2
745,310 + BACOVA_05245 0.59 -3.3
745,311 - BACOVA_05245 0.59 -0.4
745,311 - BACOVA_05245 0.59 -0.4
745,346 - BACOVA_05245 0.62 -0.2
745,434 - BACOVA_05245 0.71 -1.2
745,535 - BACOVA_05245 0.81 -1.4
745,543 + BACOVA_05245 0.82 -0.2
745,544 - BACOVA_05245 0.82 -1.0
745,603 + BACOVA_05245 0.87 -2.5
745,604 - BACOVA_05245 0.88 -0.9
745,613 + BACOVA_05245 0.88 -2.4
745,614 - BACOVA_05245 0.89 -0.2
745,615 + BACOVA_05245 0.89 -3.0
745,616 - BACOVA_05245 0.89 +0.4
745,685 - -1.4
745,685 - +0.8
745,690 + +0.1
745,692 + -2.9
745,692 + -2.6
745,693 - -1.7
745,704 + -4.2
745,705 - -0.4
745,742 - -1.3
745,743 + -2.6
745,743 + -1.2
745,744 - -0.4
745,744 - +0.6
745,872 + BACOVA_05246 0.18 -3.2
745,935 + BACOVA_05246 0.25 -1.5
745,937 + BACOVA_05246 0.26 -2.5
745,946 + BACOVA_05246 0.27 -1.6
745,946 + BACOVA_05246 0.27 -1.4
746,087 + BACOVA_05246 0.43 -1.0
746,090 - BACOVA_05246 0.44 +1.4
746,090 - BACOVA_05246 0.44 -0.1
746,153 + BACOVA_05246 0.51 -1.7
746,153 + BACOVA_05246 0.51 -3.2
746,155 + BACOVA_05246 0.51 -2.4
746,156 - BACOVA_05246 0.51 +1.7
746,198 + BACOVA_05246 0.56 -0.6
746,199 - BACOVA_05246 0.57 -1.6
746,199 - BACOVA_05246 0.57 +0.7
746,250 - BACOVA_05246 0.63 +0.6
746,250 - BACOVA_05246 0.63 +0.1
746,342 + BACOVA_05246 0.74 -1.2
746,343 - BACOVA_05246 0.74 +1.3
746,354 - BACOVA_05246 0.75 -1.4
746,396 - BACOVA_05246 0.80 -0.2
746,408 - BACOVA_05246 0.81 +1.7
746,431 - BACOVA_05246 0.84 -0.4
746,433 - BACOVA_05246 0.84 +0.1
746,483 + +1.4
746,522 - -0.6
746,546 + -2.0
746,546 + -3.3
746,547 - +1.4
746,547 - +1.0
746,562 + -2.4
746,563 - -0.2
746,563 - -0.1
746,618 + BACOVA_05247 0.28 -0.7
746,639 + BACOVA_05247 0.44 -2.0
746,639 + BACOVA_05247 0.44 -0.8
746,641 + BACOVA_05247 0.46 -1.1
746,643 + BACOVA_05247 0.48 -0.7
746,643 + BACOVA_05247 0.48 -1.9
746,644 - BACOVA_05247 0.48 -0.8
746,666 - BACOVA_05247 0.66 -0.1
746,687 + BACOVA_05247 0.83 -0.9
746,725 - +0.5
746,733 - -0.3
746,733 - +0.5
746,780 + -0.1
746,789 - -1.4
746,802 + -0.4
746,805 - +0.6
746,810 + +0.2
746,810 + +1.8
746,811 - -1.8
746,822 - -1.1
746,822 - -1.2
746,825 - +0.4
746,831 + BACOVA_05248 0.11 +0.1
746,832 - BACOVA_05248 0.11 +0.7
746,888 + BACOVA_05248 0.23 -0.9
746,926 - BACOVA_05248 0.31 -0.4
746,927 + BACOVA_05248 0.32 -0.4
747,008 - BACOVA_05248 0.49 +0.6
747,011 + BACOVA_05248 0.50 +1.4
747,011 + BACOVA_05248 0.50 +0.4
747,011 + BACOVA_05248 0.50 -0.5
747,011 + BACOVA_05248 0.50 -1.6
747,012 - BACOVA_05248 0.50 +0.8
747,051 + BACOVA_05248 0.58 -1.0
747,094 - BACOVA_05248 0.68 +0.3
747,096 + BACOVA_05248 0.68 -0.9
747,096 + BACOVA_05248 0.68 +1.6
747,134 - BACOVA_05248 0.76 +0.5
747,141 + BACOVA_05248 0.78 +0.1
747,141 + BACOVA_05248 0.78 -0.5
747,144 + BACOVA_05248 0.79 +0.1
747,144 + BACOVA_05248 0.79 -0.2
747,145 - BACOVA_05248 0.79 +0.1
747,228 - +1.0
747,228 - +0.8
747,240 + +0.1
747,241 - +0.6
747,251 + +0.4
747,252 - +0.8
747,292 + +1.4
747,292 + -1.4
747,299 - +1.6
747,372 - +1.1
747,388 + BACOVA_05249 0.11 -0.9
747,401 - BACOVA_05249 0.12 +1.1
747,432 + BACOVA_05249 0.14 -0.4
747,436 + BACOVA_05249 0.15 -0.5
747,437 - BACOVA_05249 0.15 -0.3
747,437 - BACOVA_05249 0.15 +0.1
747,520 - BACOVA_05249 0.22 -0.0
747,537 + BACOVA_05249 0.23 -2.0

Or see this region's nucleotide sequence