Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00751

Experiment: b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_00750 and BACOVA_00751 are separated by 21 nucleotidesBACOVA_00751 and BACOVA_00752 are separated by 207 nucleotides BACOVA_00750: BACOVA_00750 - histidine kinase A domain protein, at 429,549 to 430,823 _00750 BACOVA_00751: BACOVA_00751 - response regulator receiver domain protein, at 430,845 to 431,522 _00751 BACOVA_00752: BACOVA_00752 - proline--tRNA ligase, at 431,730 to 433,223 _00752 Position (kb) 430 431 432Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 429.880 kb on - strand, within BACOVA_00750at 429.892 kb on - strand, within BACOVA_00750at 429.892 kb on - strand, within BACOVA_00750at 429.908 kb on - strand, within BACOVA_00750at 429.932 kb on - strand, within BACOVA_00750at 429.946 kb on - strand, within BACOVA_00750at 429.988 kb on - strand, within BACOVA_00750at 430.006 kb on - strand, within BACOVA_00750at 430.009 kb on - strand, within BACOVA_00750at 430.127 kb on + strand, within BACOVA_00750at 430.127 kb on + strand, within BACOVA_00750at 430.199 kb on + strand, within BACOVA_00750at 430.210 kb on + strand, within BACOVA_00750at 430.262 kb on + strand, within BACOVA_00750at 430.311 kb on + strand, within BACOVA_00750at 430.312 kb on - strand, within BACOVA_00750at 430.312 kb on - strand, within BACOVA_00750at 430.318 kb on - strand, within BACOVA_00750at 430.321 kb on + strand, within BACOVA_00750at 430.335 kb on - strand, within BACOVA_00750at 430.368 kb on - strand, within BACOVA_00750at 430.368 kb on - strand, within BACOVA_00750at 430.378 kb on - strand, within BACOVA_00750at 430.387 kb on - strand, within BACOVA_00750at 430.387 kb on - strand, within BACOVA_00750at 430.390 kb on + strand, within BACOVA_00750at 430.497 kb on - strand, within BACOVA_00750at 430.497 kb on - strand, within BACOVA_00750at 430.502 kb on + strand, within BACOVA_00750at 430.503 kb on - strand, within BACOVA_00750at 430.544 kb on - strand, within BACOVA_00750at 430.551 kb on - strand, within BACOVA_00750at 430.551 kb on - strand, within BACOVA_00750at 430.551 kb on - strand, within BACOVA_00750at 430.561 kb on + strand, within BACOVA_00750at 430.599 kb on + strand, within BACOVA_00750at 430.610 kb on + strand, within BACOVA_00750at 430.611 kb on - strand, within BACOVA_00750at 430.612 kb on + strand, within BACOVA_00750at 430.613 kb on - strand, within BACOVA_00750at 430.613 kb on - strand, within BACOVA_00750at 430.647 kb on + strand, within BACOVA_00750at 430.745 kb on - strandat 430.770 kb on + strandat 430.772 kb on + strandat 430.807 kb on + strandat 430.808 kb on - strandat 430.810 kb on + strandat 430.851 kb on + strandat 430.877 kb on - strandat 430.877 kb on - strandat 430.945 kb on + strand, within BACOVA_00751at 430.947 kb on + strand, within BACOVA_00751at 430.947 kb on + strand, within BACOVA_00751at 430.948 kb on - strand, within BACOVA_00751at 430.976 kb on + strand, within BACOVA_00751at 431.019 kb on + strand, within BACOVA_00751at 431.039 kb on + strand, within BACOVA_00751at 431.044 kb on + strand, within BACOVA_00751at 431.045 kb on - strand, within BACOVA_00751at 431.045 kb on - strand, within BACOVA_00751at 431.054 kb on + strand, within BACOVA_00751at 431.070 kb on - strand, within BACOVA_00751at 431.100 kb on + strand, within BACOVA_00751at 431.107 kb on + strand, within BACOVA_00751at 431.107 kb on + strand, within BACOVA_00751at 431.107 kb on + strand, within BACOVA_00751at 431.122 kb on - strand, within BACOVA_00751at 431.128 kb on - strand, within BACOVA_00751at 431.199 kb on + strand, within BACOVA_00751at 431.200 kb on - strand, within BACOVA_00751at 431.230 kb on + strand, within BACOVA_00751at 431.231 kb on - strand, within BACOVA_00751at 431.291 kb on + strand, within BACOVA_00751at 431.376 kb on + strand, within BACOVA_00751at 431.382 kb on - strand, within BACOVA_00751at 431.382 kb on - strand, within BACOVA_00751at 431.389 kb on + strand, within BACOVA_00751at 431.505 kb on + strandat 431.522 kb on + strandat 431.523 kb on - strandat 431.523 kb on - strandat 431.548 kb on + strandat 431.552 kb on - strandat 431.615 kb on + strandat 431.649 kb on + strandat 431.654 kb on - strandat 431.654 kb on - strandat 431.658 kb on + strandat 431.662 kb on - strandat 431.715 kb on - strandat 431.715 kb on - strandat 431.715 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)
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429,880 - BACOVA_00750 0.26 -0.3
429,892 - BACOVA_00750 0.27 +0.6
429,892 - BACOVA_00750 0.27 +0.8
429,908 - BACOVA_00750 0.28 +0.0
429,932 - BACOVA_00750 0.30 -1.1
429,946 - BACOVA_00750 0.31 +2.2
429,988 - BACOVA_00750 0.34 +1.4
430,006 - BACOVA_00750 0.36 +0.3
430,009 - BACOVA_00750 0.36 -1.6
430,127 + BACOVA_00750 0.45 +1.5
430,127 + BACOVA_00750 0.45 +2.2
430,199 + BACOVA_00750 0.51 +0.2
430,210 + BACOVA_00750 0.52 +0.6
430,262 + BACOVA_00750 0.56 -0.3
430,311 + BACOVA_00750 0.60 -0.3
430,312 - BACOVA_00750 0.60 -0.1
430,312 - BACOVA_00750 0.60 +1.9
430,318 - BACOVA_00750 0.60 -0.4
430,321 + BACOVA_00750 0.61 +0.9
430,335 - BACOVA_00750 0.62 +1.2
430,368 - BACOVA_00750 0.64 +0.9
430,368 - BACOVA_00750 0.64 +0.3
430,378 - BACOVA_00750 0.65 -0.1
430,387 - BACOVA_00750 0.66 +1.3
430,387 - BACOVA_00750 0.66 +0.6
430,390 + BACOVA_00750 0.66 -1.5
430,497 - BACOVA_00750 0.74 -0.3
430,497 - BACOVA_00750 0.74 +1.2
430,502 + BACOVA_00750 0.75 +1.7
430,503 - BACOVA_00750 0.75 -0.1
430,544 - BACOVA_00750 0.78 +0.1
430,551 - BACOVA_00750 0.79 +1.4
430,551 - BACOVA_00750 0.79 -0.3
430,551 - BACOVA_00750 0.79 -1.5
430,561 + BACOVA_00750 0.79 +1.2
430,599 + BACOVA_00750 0.82 -0.3
430,610 + BACOVA_00750 0.83 -1.3
430,611 - BACOVA_00750 0.83 +0.8
430,612 + BACOVA_00750 0.83 +0.2
430,613 - BACOVA_00750 0.83 +1.4
430,613 - BACOVA_00750 0.83 +0.2
430,647 + BACOVA_00750 0.86 -0.6
430,745 - +1.0
430,770 + +0.2
430,772 + -0.8
430,807 + -1.3
430,808 - +1.2
430,810 + -0.4
430,851 + -1.1
430,877 - -0.9
430,877 - -0.8
430,945 + BACOVA_00751 0.15 +0.5
430,947 + BACOVA_00751 0.15 -1.3
430,947 + BACOVA_00751 0.15 +0.1
430,948 - BACOVA_00751 0.15 -0.8
430,976 + BACOVA_00751 0.19 -0.3
431,019 + BACOVA_00751 0.26 +0.2
431,039 + BACOVA_00751 0.29 +0.1
431,044 + BACOVA_00751 0.29 +0.9
431,045 - BACOVA_00751 0.29 +1.2
431,045 - BACOVA_00751 0.29 -2.8
431,054 + BACOVA_00751 0.31 -1.3
431,070 - BACOVA_00751 0.33 -0.6
431,100 + BACOVA_00751 0.38 +1.9
431,107 + BACOVA_00751 0.39 -1.8
431,107 + BACOVA_00751 0.39 -1.0
431,107 + BACOVA_00751 0.39 -0.3
431,122 - BACOVA_00751 0.41 -0.8
431,128 - BACOVA_00751 0.42 +0.1
431,199 + BACOVA_00751 0.52 +1.8
431,200 - BACOVA_00751 0.52 +0.2
431,230 + BACOVA_00751 0.57 -0.5
431,231 - BACOVA_00751 0.57 -0.6
431,291 + BACOVA_00751 0.66 +1.4
431,376 + BACOVA_00751 0.78 -0.9
431,382 - BACOVA_00751 0.79 -0.4
431,382 - BACOVA_00751 0.79 -1.2
431,389 + BACOVA_00751 0.80 -1.2
431,505 + +1.5
431,522 + -1.1
431,523 - -0.9
431,523 - +0.1
431,548 + -0.6
431,552 - -1.8
431,615 + -0.6
431,649 + +0.4
431,654 - -0.3
431,654 - +0.2
431,658 + -1.0
431,662 - +0.4
431,715 - -2.1
431,715 - -2.3
431,715 - -1.2

Or see this region's nucleotide sequence