Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00190

Experiment: b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	b-Mannan borohydrate reduced carob seed 2.5 mg/ml (C)
4,425	+		BACOVA_00189	0.27	+1.4
4,426	-		BACOVA_00189	0.27	+0.4
4,470	+		BACOVA_00189	0.30	+1.4
4,483	+		BACOVA_00189	0.31	+1.7
4,540	-		BACOVA_00189	0.35	+1.9
4,569	+		BACOVA_00189	0.37	-1.2
4,675	-		BACOVA_00189	0.45	+1.1
4,695	+		BACOVA_00189	0.47	+1.0
4,696	-		BACOVA_00189	0.47	-1.6
4,699	-		BACOVA_00189	0.47	+0.4
4,699	-		BACOVA_00189	0.47	-0.9
4,736	-		BACOVA_00189	0.50	-1.2
4,764	+		BACOVA_00189	0.52	+0.7
4,765	-		BACOVA_00189	0.52	+0.2
4,770	+		BACOVA_00189	0.52	-0.2
4,780	+		BACOVA_00189	0.53	+1.1
4,832	-		BACOVA_00189	0.57	+1.4
4,863	+		BACOVA_00189	0.59	-0.6
4,864	-		BACOVA_00189	0.59	+1.7
4,864	-		BACOVA_00189	0.59	-0.9
4,864	-		BACOVA_00189	0.59	+0.2
4,888	+		BACOVA_00189	0.61	+0.1
4,983	+		BACOVA_00189	0.68	+1.0
4,993	-		BACOVA_00189	0.68	-0.0
5,073	+		BACOVA_00189	0.74	-0.6
5,074	-		BACOVA_00189	0.74	+0.4
5,074	-		BACOVA_00189	0.74	+1.4
5,074	-		BACOVA_00189	0.74	-0.5
5,077	+		BACOVA_00189	0.74	+0.6
5,078	-		BACOVA_00189	0.74	+0.1
5,079	+		BACOVA_00189	0.75	-0.1
5,095	+		BACOVA_00189	0.76	+1.2
5,104	-		BACOVA_00189	0.76	+1.5
5,140	+		BACOVA_00189	0.79	-0.0
5,152	-		BACOVA_00189	0.80	-0.2
5,160	+		BACOVA_00189	0.80	-0.6
5,178	+		BACOVA_00189	0.82	+1.0
5,193	-		BACOVA_00189	0.83	+1.4
5,240	-		BACOVA_00189	0.86	+0.9
5,271	+		BACOVA_00189	0.89	+2.8
5,274	+		BACOVA_00189	0.89	+0.1
5,278	+		BACOVA_00189	0.89	+0.9
5,281	+		BACOVA_00189	0.89	+2.7
5,283	+		BACOVA_00189	0.89	-0.6
5,283	+		BACOVA_00189	0.89	+3.3
5,284	-		BACOVA_00189	0.89	-0.6
5,286	-		BACOVA_00189	0.90	+0.4
5,318	+				+0.2
5,318	+				+0.8
5,322	+				-0.0
5,323	-				+0.8
5,355	+				+1.4
5,356	-				-0.2
5,356	-				-0.1
5,356	-				+0.7
5,358	+				-0.9
5,359	-				+0.3
5,416	-				-1.6
5,416	-				-0.9
5,433	+				+0.1
5,450	+				-0.6
5,525	-		BACOVA_00190	0.16	+0.4
5,619	-		BACOVA_00190	0.29	-0.2
5,723	+		BACOVA_00190	0.44	+1.1
5,739	-		BACOVA_00190	0.46	+0.1
5,762	+		BACOVA_00190	0.50	-0.1
5,819	-		BACOVA_00190	0.58	+0.8
5,822	+		BACOVA_00190	0.58	+0.1
5,822	+		BACOVA_00190	0.58	+0.7
5,874	-		BACOVA_00190	0.66	-1.1
5,884	+		BACOVA_00190	0.67	-0.7
5,885	-		BACOVA_00190	0.67	+0.7
5,885	-		BACOVA_00190	0.67	-0.3
5,896	+		BACOVA_00190	0.69	-1.1
5,982	+		BACOVA_00190	0.81	+0.3
6,025	-		BACOVA_00190	0.87	+0.4
6,026	+		BACOVA_00190	0.88	+1.1
6,026	+		BACOVA_00190	0.88	-0.5
6,026	+		BACOVA_00190	0.88	-0.6
6,027	-		BACOVA_00190	0.88	-1.9
6,027	-		BACOVA_00190	0.88	+1.1
6,048	+				+2.0
6,048	+				-1.8
6,082	+				+1.9
6,098	+				-0.7
6,098	+				+0.8
6,141	+				-0.6
6,141	+				+1.7
6,142	-		BACOVA_00191	0.10	+0.5
6,147	+		BACOVA_00191	0.12	-0.9
6,179	-		BACOVA_00191	0.23	+0.7
6,180	+		BACOVA_00191	0.23	+1.0
6,180	+		BACOVA_00191	0.23	-0.1
6,180	+		BACOVA_00191	0.23	+0.2
6,261	+		BACOVA_00191	0.51	+0.8
6,265	+		BACOVA_00191	0.52	-1.8
6,288	+		BACOVA_00191	0.60	+1.3
6,297	+		BACOVA_00191	0.63	+1.7
6,312	+		BACOVA_00191	0.68	-0.9
6,313	-		BACOVA_00191	0.68	+0.4
6,377	-				-1.2
6,377	-				+0.7
6,384	-				+1.7
6,419	+				-0.6
6,421	+				+0.5
6,424	+				+0.1
6,425	-				-1.0
6,454	+				+0.7
6,454	+				+2.5
6,454	+				+0.4
6,455	-				-1.2
6,455	-				-1.7
6,486	-				+0.4
6,510	-				+0.4
6,510	-				+0.3
6,510	-				-1.2
6,533	-				-1.6
6,545	+				-0.6
6,548	+				+2.0
6,582	+				-0.6
6,590	+				+0.4
6,597	+				+0.4
6,597	+				-0.3
6,601	+				+0.7
6,601	+				+0.4
6,614	-				+1.0
6,631	-		BACOVA_00192	0.12	-0.2
6,632	+		BACOVA_00192	0.12	-0.2
6,632	+		BACOVA_00192	0.12	-0.9
6,632	+		BACOVA_00192	0.12	+0.1
6,649	-		BACOVA_00192	0.14	+0.7
6,747	+		BACOVA_00192	0.28	+0.7
6,748	-		BACOVA_00192	0.28	+1.4
6,749	+		BACOVA_00192	0.28	+0.4
6,749	+		BACOVA_00192	0.28	+0.0
6,753	+		BACOVA_00192	0.29	+0.4
6,753	+		BACOVA_00192	0.29	+2.4
6,753	+		BACOVA_00192	0.29	+1.1
6,753	+		BACOVA_00192	0.29	-0.9
6,770	+		BACOVA_00192	0.31	+0.8
6,793	-		BACOVA_00192	0.34	+0.9
6,819	+		BACOVA_00192	0.38	+2.4
6,819	+		BACOVA_00192	0.38	+0.6
6,820	-		BACOVA_00192	0.38	+2.7
6,864	+		BACOVA_00192	0.44	+0.6
6,865	-		BACOVA_00192	0.44	+2.0
6,944	-		BACOVA_00192	0.55	-0.2
6,951	+		BACOVA_00192	0.56	+1.4
6,989	-		BACOVA_00192	0.61	-0.2
6,989	-		BACOVA_00192	0.61	-1.6
7,016	-		BACOVA_00192	0.64	+2.2
7,018	-		BACOVA_00192	0.65	+1.0
7,045	-		BACOVA_00192	0.68	+0.7
7,056	+		BACOVA_00192	0.70	-0.6
7,056	+		BACOVA_00192	0.70	+0.9
7,057	-		BACOVA_00192	0.70	-0.2
7,100	-		BACOVA_00192	0.76	+1.4
7,107	+		BACOVA_00192	0.77	+0.2