Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05196

Experiment: B-glucan from yeast 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05195 and BACOVA_05194 overlap by 19 nucleotidesBACOVA_05194 and BACOVA_05196 are separated by 266 nucleotidesBACOVA_05196 and BACOVA_05197 overlap by 14 nucleotides BACOVA_05195: BACOVA_05195 - hypothetical protein, at 693,821 to 695,008 _05195 BACOVA_05194: BACOVA_05194 - hypothetical protein, at 694,990 to 695,100 _05194 BACOVA_05196: BACOVA_05196 - pantothenate kinase, type III, at 695,367 to 696,155 _05196 BACOVA_05197: BACOVA_05197 - outer membrane protein transport protein, Ompp1/FadL/TodX family, at 696,142 to 697,413 _05197 Position (kb) 695 696 697Strain fitness (log2 ratio) -3 -2 -1 0 1at 695.024 kb on - strand, within BACOVA_05194at 695.039 kb on - strand, within BACOVA_05194at 695.081 kb on + strand, within BACOVA_05194at 695.098 kb on + strandat 695.098 kb on + strandat 695.125 kb on - strandat 695.134 kb on - strandat 695.219 kb on + strandat 695.227 kb on + strandat 695.273 kb on - strandat 695.283 kb on + strandat 695.286 kb on + strandat 695.287 kb on - strandat 695.295 kb on - strandat 695.299 kb on - strandat 695.299 kb on - strandat 695.354 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/ml (C)
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695,024 - BACOVA_05194 0.31 +0.6
695,039 - BACOVA_05194 0.44 -0.6
695,081 + BACOVA_05194 0.82 -0.6
695,098 + -3.3
695,098 + -0.9
695,125 - +0.8
695,134 - +1.3
695,219 + +0.1
695,227 + -1.7
695,273 - -1.8
695,283 + -0.1
695,286 + -0.1
695,287 - -1.9
695,295 - -1.2
695,299 - +0.5
695,299 - -1.1
695,354 + +0.2

Or see this region's nucleotide sequence