Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04830

Experiment: B-glucan from yeast 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_04826 and BACOVA_04827 are separated by 3 nucleotidesBACOVA_04827 and BACOVA_04828 are separated by 14 nucleotidesBACOVA_04828 and BACOVA_04829 are separated by 127 nucleotidesBACOVA_04829 and BACOVA_04830 are separated by 297 nucleotidesBACOVA_04830 and BACOVA_04831 are separated by 85 nucleotides BACOVA_04826: BACOVA_04826 - ATP-dependent metallopeptidase HflB, at 194,154 to 196,310 _04826 BACOVA_04827: BACOVA_04827 - iojap-like protein, at 196,314 to 196,673 _04827 BACOVA_04828: BACOVA_04828 - hypothetical protein, at 196,688 to 196,810 _04828 BACOVA_04829: BACOVA_04829 - tRNA-Gln, at 196,938 to 197,008 _04829 BACOVA_04830: BACOVA_04830 - hypothetical protein, at 197,306 to 199,159 _04830 BACOVA_04831: BACOVA_04831 - magnesium transporter, at 199,245 to 200,585 _04831 Position (kb) 197 198 199 200Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 196.312 kb on - strandat 196.316 kb on - strandat 196.466 kb on - strand, within BACOVA_04827at 196.466 kb on - strand, within BACOVA_04827at 196.466 kb on - strand, within BACOVA_04827at 196.518 kb on - strand, within BACOVA_04827at 196.518 kb on - strand, within BACOVA_04827at 196.518 kb on - strand, within BACOVA_04827at 196.582 kb on - strand, within BACOVA_04827at 196.654 kb on - strandat 196.690 kb on - strandat 196.693 kb on - strandat 196.707 kb on - strand, within BACOVA_04828at 196.715 kb on - strand, within BACOVA_04828at 196.717 kb on - strand, within BACOVA_04828at 196.750 kb on - strand, within BACOVA_04828at 196.852 kb on + strandat 196.943 kb on + strandat 196.943 kb on + strandat 196.957 kb on - strand, within BACOVA_04829at 197.025 kb on + strandat 197.199 kb on - strandat 197.231 kb on - strandat 197.231 kb on - strandat 197.250 kb on + strandat 197.252 kb on + strandat 197.265 kb on + strandat 197.281 kb on - strandat 197.308 kb on - strandat 197.354 kb on + strandat 197.385 kb on - strandat 197.447 kb on + strandat 197.494 kb on + strand, within BACOVA_04830at 197.494 kb on + strand, within BACOVA_04830at 197.495 kb on - strand, within BACOVA_04830at 197.495 kb on - strand, within BACOVA_04830at 197.647 kb on - strand, within BACOVA_04830at 197.647 kb on - strand, within BACOVA_04830at 197.647 kb on - strand, within BACOVA_04830at 197.649 kb on - strand, within BACOVA_04830at 197.703 kb on - strand, within BACOVA_04830at 197.720 kb on - strand, within BACOVA_04830at 197.866 kb on + strand, within BACOVA_04830at 197.866 kb on + strand, within BACOVA_04830at 197.934 kb on - strand, within BACOVA_04830at 198.223 kb on - strand, within BACOVA_04830at 198.410 kb on + strand, within BACOVA_04830at 198.546 kb on - strand, within BACOVA_04830at 198.563 kb on + strand, within BACOVA_04830at 198.563 kb on + strand, within BACOVA_04830at 198.568 kb on - strand, within BACOVA_04830at 198.569 kb on + strand, within BACOVA_04830at 198.623 kb on - strand, within BACOVA_04830at 198.871 kb on + strand, within BACOVA_04830at 198.872 kb on - strand, within BACOVA_04830at 198.878 kb on + strand, within BACOVA_04830at 198.884 kb on - strand, within BACOVA_04830at 198.993 kb on - strandat 198.996 kb on - strandat 199.138 kb on + strandat 199.163 kb on - strandat 199.165 kb on - strandat 199.278 kb on + strandat 199.302 kb on - strandat 199.308 kb on + strandat 199.382 kb on + strand, within BACOVA_04831at 199.458 kb on - strand, within BACOVA_04831at 199.458 kb on - strand, within BACOVA_04831at 199.466 kb on - strand, within BACOVA_04831at 199.471 kb on + strand, within BACOVA_04831at 199.472 kb on - strand, within BACOVA_04831at 199.472 kb on - strand, within BACOVA_04831at 199.474 kb on - strand, within BACOVA_04831at 199.474 kb on - strand, within BACOVA_04831at 199.474 kb on - strand, within BACOVA_04831at 199.476 kb on + strand, within BACOVA_04831at 199.479 kb on + strand, within BACOVA_04831at 199.480 kb on - strand, within BACOVA_04831at 199.487 kb on + strand, within BACOVA_04831at 199.487 kb on + strand, within BACOVA_04831at 199.488 kb on - strand, within BACOVA_04831at 199.499 kb on + strand, within BACOVA_04831at 199.510 kb on - strand, within BACOVA_04831at 199.619 kb on + strand, within BACOVA_04831at 199.639 kb on + strand, within BACOVA_04831at 199.639 kb on + strand, within BACOVA_04831at 199.639 kb on + strand, within BACOVA_04831at 199.690 kb on - strand, within BACOVA_04831at 199.694 kb on + strand, within BACOVA_04831at 199.694 kb on + strand, within BACOVA_04831at 199.694 kb on + strand, within BACOVA_04831at 199.726 kb on - strand, within BACOVA_04831at 199.779 kb on + strand, within BACOVA_04831at 199.902 kb on - strand, within BACOVA_04831at 199.916 kb on - strand, within BACOVA_04831at 199.916 kb on - strand, within BACOVA_04831at 199.932 kb on + strand, within BACOVA_04831at 199.936 kb on - strand, within BACOVA_04831at 199.936 kb on - strand, within BACOVA_04831at 199.956 kb on + strand, within BACOVA_04831at 199.956 kb on + strand, within BACOVA_04831at 199.956 kb on + strand, within BACOVA_04831at 199.956 kb on + strand, within BACOVA_04831at 199.957 kb on - strand, within BACOVA_04831at 199.957 kb on - strand, within BACOVA_04831at 199.957 kb on - strand, within BACOVA_04831at 199.957 kb on - strand, within BACOVA_04831at 200.005 kb on - strand, within BACOVA_04831at 200.018 kb on + strand, within BACOVA_04831at 200.018 kb on + strand, within BACOVA_04831at 200.019 kb on - strand, within BACOVA_04831at 200.043 kb on - strand, within BACOVA_04831at 200.074 kb on + strand, within BACOVA_04831at 200.074 kb on + strand, within BACOVA_04831at 200.074 kb on + strand, within BACOVA_04831at 200.074 kb on + strand, within BACOVA_04831at 200.076 kb on + strand, within BACOVA_04831at 200.076 kb on + strand, within BACOVA_04831at 200.077 kb on - strand, within BACOVA_04831at 200.077 kb on - strand, within BACOVA_04831at 200.077 kb on - strand, within BACOVA_04831at 200.077 kb on - strand, within BACOVA_04831at 200.080 kb on + strand, within BACOVA_04831at 200.080 kb on + strand, within BACOVA_04831at 200.080 kb on + strand, within BACOVA_04831at 200.081 kb on - strand, within BACOVA_04831at 200.081 kb on - strand, within BACOVA_04831at 200.138 kb on + strand, within BACOVA_04831at 200.138 kb on + strand, within BACOVA_04831

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Per-strain Table

Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/ml (C)
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196,312 - +0.4
196,316 - -0.1
196,466 - BACOVA_04827 0.42 +4.0
196,466 - BACOVA_04827 0.42 +1.2
196,466 - BACOVA_04827 0.42 -1.7
196,518 - BACOVA_04827 0.57 +2.6
196,518 - BACOVA_04827 0.57 +1.2
196,518 - BACOVA_04827 0.57 -0.3
196,582 - BACOVA_04827 0.74 -0.2
196,654 - +1.2
196,690 - -1.8
196,693 - +0.2
196,707 - BACOVA_04828 0.15 -0.1
196,715 - BACOVA_04828 0.22 +1.6
196,717 - BACOVA_04828 0.24 -0.4
196,750 - BACOVA_04828 0.50 -0.8
196,852 + +0.2
196,943 + -1.8
196,943 + -0.4
196,957 - BACOVA_04829 0.27 -2.3
197,025 + +0.1
197,199 - -0.1
197,231 - +0.8
197,231 - +0.2
197,250 + +1.2
197,252 + -0.5
197,265 + +0.2
197,281 - -0.3
197,308 - +0.1
197,354 + -0.8
197,385 - +2.5
197,447 + -0.4
197,494 + BACOVA_04830 0.10 -0.4
197,494 + BACOVA_04830 0.10 -0.8
197,495 - BACOVA_04830 0.10 +2.2
197,495 - BACOVA_04830 0.10 +0.2
197,647 - BACOVA_04830 0.18 -1.4
197,647 - BACOVA_04830 0.18 -2.1
197,647 - BACOVA_04830 0.18 -1.4
197,649 - BACOVA_04830 0.19 -0.8
197,703 - BACOVA_04830 0.21 -0.8
197,720 - BACOVA_04830 0.22 -0.4
197,866 + BACOVA_04830 0.30 +1.2
197,866 + BACOVA_04830 0.30 -1.1
197,934 - BACOVA_04830 0.34 -0.4
198,223 - BACOVA_04830 0.49 -1.6
198,410 + BACOVA_04830 0.60 -0.8
198,546 - BACOVA_04830 0.67 +0.2
198,563 + BACOVA_04830 0.68 -0.4
198,563 + BACOVA_04830 0.68 +1.2
198,568 - BACOVA_04830 0.68 -0.4
198,569 + BACOVA_04830 0.68 +0.2
198,623 - BACOVA_04830 0.71 -0.4
198,871 + BACOVA_04830 0.84 -2.0
198,872 - BACOVA_04830 0.84 -1.6
198,878 + BACOVA_04830 0.85 -0.8
198,884 - BACOVA_04830 0.85 -0.8
198,993 - +0.2
198,996 - -1.4
199,138 + +0.2
199,163 - +1.2
199,165 - -0.4
199,278 + -1.0
199,302 - +1.2
199,308 + -0.9
199,382 + BACOVA_04831 0.10 -0.1
199,458 - BACOVA_04831 0.16 -1.1
199,458 - BACOVA_04831 0.16 +0.0
199,466 - BACOVA_04831 0.16 -0.6
199,471 + BACOVA_04831 0.17 -0.1
199,472 - BACOVA_04831 0.17 -1.1
199,472 - BACOVA_04831 0.17 +1.8
199,474 - BACOVA_04831 0.17 +0.2
199,474 - BACOVA_04831 0.17 -1.0
199,474 - BACOVA_04831 0.17 -1.1
199,476 + BACOVA_04831 0.17 -1.2
199,479 + BACOVA_04831 0.17 -1.8
199,480 - BACOVA_04831 0.18 -0.4
199,487 + BACOVA_04831 0.18 +0.2
199,487 + BACOVA_04831 0.18 -1.4
199,488 - BACOVA_04831 0.18 -0.1
199,499 + BACOVA_04831 0.19 -0.4
199,510 - BACOVA_04831 0.20 -0.7
199,619 + BACOVA_04831 0.28 +0.8
199,639 + BACOVA_04831 0.29 +0.1
199,639 + BACOVA_04831 0.29 +0.6
199,639 + BACOVA_04831 0.29 -0.2
199,690 - BACOVA_04831 0.33 +0.5
199,694 + BACOVA_04831 0.33 -0.5
199,694 + BACOVA_04831 0.33 +2.2
199,694 + BACOVA_04831 0.33 +0.3
199,726 - BACOVA_04831 0.36 +0.6
199,779 + BACOVA_04831 0.40 +0.2
199,902 - BACOVA_04831 0.49 -0.1
199,916 - BACOVA_04831 0.50 -1.8
199,916 - BACOVA_04831 0.50 -0.4
199,932 + BACOVA_04831 0.51 +0.8
199,936 - BACOVA_04831 0.52 -1.6
199,936 - BACOVA_04831 0.52 -0.3
199,956 + BACOVA_04831 0.53 -0.6
199,956 + BACOVA_04831 0.53 +0.6
199,956 + BACOVA_04831 0.53 -2.1
199,956 + BACOVA_04831 0.53 -1.1
199,957 - BACOVA_04831 0.53 -2.6
199,957 - BACOVA_04831 0.53 -0.8
199,957 - BACOVA_04831 0.53 -0.1
199,957 - BACOVA_04831 0.53 -0.5
200,005 - BACOVA_04831 0.57 +1.2
200,018 + BACOVA_04831 0.58 -1.2
200,018 + BACOVA_04831 0.58 -0.5
200,019 - BACOVA_04831 0.58 +0.2
200,043 - BACOVA_04831 0.60 +0.1
200,074 + BACOVA_04831 0.62 -0.8
200,074 + BACOVA_04831 0.62 +0.1
200,074 + BACOVA_04831 0.62 -0.6
200,074 + BACOVA_04831 0.62 -0.4
200,076 + BACOVA_04831 0.62 -0.0
200,076 + BACOVA_04831 0.62 +0.6
200,077 - BACOVA_04831 0.62 -0.1
200,077 - BACOVA_04831 0.62 +0.5
200,077 - BACOVA_04831 0.62 -2.0
200,077 - BACOVA_04831 0.62 +0.2
200,080 + BACOVA_04831 0.62 -1.4
200,080 + BACOVA_04831 0.62 +1.2
200,080 + BACOVA_04831 0.62 -2.4
200,081 - BACOVA_04831 0.62 +1.2
200,081 - BACOVA_04831 0.62 -0.7
200,138 + BACOVA_04831 0.67 +1.2
200,138 + BACOVA_04831 0.67 -0.3

Or see this region's nucleotide sequence