Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05159

Experiment: Lentilan from mushroom 2.5 mg/ml (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntBACOVA_05157 and BACOVA_05159 are separated by 111 nucleotidesBACOVA_05159 and BACOVA_05158 overlap by 86 nucleotides BACOVA_05157: BACOVA_05157 - hypothetical protein, at 637,702 to 638,526 _05157 BACOVA_05159: BACOVA_05159 - hypothetical protein, at 638,638 to 638,778 _05159 BACOVA_05158: BACOVA_05158 - hypothetical protein, at 638,693 to 640,900 _05158 Position (kb) 638 639Strain fitness (log2 ratio) -2 -1 0 1 2at 637.638 kb on + strandat 637.639 kb on - strandat 637.639 kb on - strandat 637.668 kb on + strandat 637.698 kb on - strandat 637.698 kb on - strandat 637.817 kb on + strand, within BACOVA_05157at 637.818 kb on - strand, within BACOVA_05157at 637.885 kb on + strand, within BACOVA_05157at 637.890 kb on + strand, within BACOVA_05157at 637.890 kb on + strand, within BACOVA_05157at 637.890 kb on + strand, within BACOVA_05157at 637.890 kb on + strand, within BACOVA_05157at 637.891 kb on - strand, within BACOVA_05157at 637.891 kb on - strand, within BACOVA_05157at 637.892 kb on + strand, within BACOVA_05157at 637.892 kb on + strand, within BACOVA_05157at 637.892 kb on + strand, within BACOVA_05157at 637.893 kb on - strand, within BACOVA_05157at 637.893 kb on - strand, within BACOVA_05157at 637.895 kb on - strand, within BACOVA_05157at 637.895 kb on - strand, within BACOVA_05157at 637.895 kb on - strand, within BACOVA_05157at 637.908 kb on + strand, within BACOVA_05157at 637.921 kb on - strand, within BACOVA_05157at 637.921 kb on - strand, within BACOVA_05157at 637.954 kb on + strand, within BACOVA_05157at 637.979 kb on - strand, within BACOVA_05157at 637.987 kb on - strand, within BACOVA_05157at 637.994 kb on + strand, within BACOVA_05157at 638.033 kb on + strand, within BACOVA_05157at 638.033 kb on + strand, within BACOVA_05157at 638.034 kb on - strand, within BACOVA_05157at 638.083 kb on - strand, within BACOVA_05157at 638.083 kb on - strand, within BACOVA_05157at 638.084 kb on + strand, within BACOVA_05157at 638.085 kb on - strand, within BACOVA_05157at 638.232 kb on + strand, within BACOVA_05157at 638.234 kb on + strand, within BACOVA_05157at 638.234 kb on + strand, within BACOVA_05157at 638.234 kb on + strand, within BACOVA_05157at 638.237 kb on + strand, within BACOVA_05157at 638.250 kb on + strand, within BACOVA_05157at 638.281 kb on - strand, within BACOVA_05157at 638.281 kb on - strand, within BACOVA_05157at 638.325 kb on + strand, within BACOVA_05157at 638.326 kb on - strand, within BACOVA_05157at 638.350 kb on + strand, within BACOVA_05157at 638.350 kb on + strand, within BACOVA_05157at 638.351 kb on - strand, within BACOVA_05157at 638.381 kb on - strand, within BACOVA_05157at 638.388 kb on + strand, within BACOVA_05157at 638.428 kb on - strand, within BACOVA_05157at 638.430 kb on - strand, within BACOVA_05157at 638.466 kb on - strandat 638.466 kb on - strandat 638.466 kb on - strandat 638.475 kb on + strandat 638.476 kb on - strandat 638.478 kb on + strandat 638.479 kb on - strandat 638.491 kb on - strandat 638.522 kb on + strandat 638.523 kb on - strandat 638.523 kb on - strandat 638.536 kb on + strandat 638.540 kb on - strandat 638.583 kb on + strandat 638.590 kb on - strandat 638.591 kb on + strandat 638.591 kb on + strandat 638.592 kb on - strandat 638.592 kb on - strandat 638.595 kb on + strandat 638.595 kb on + strandat 638.596 kb on - strandat 638.596 kb on - strandat 638.596 kb on - strandat 638.597 kb on + strandat 638.639 kb on + strandat 638.648 kb on - strandat 638.676 kb on + strand, within BACOVA_05159at 638.679 kb on - strand, within BACOVA_05159at 638.679 kb on - strand, within BACOVA_05159at 638.691 kb on + strand, within BACOVA_05159at 638.703 kb on + strandat 638.724 kb on + strandat 638.729 kb on + strandat 638.739 kb on + strandat 638.787 kb on + strandat 638.832 kb on + strandat 638.832 kb on + strandat 638.833 kb on - strandat 638.862 kb on - strandat 638.895 kb on + strandat 638.896 kb on - strandat 638.896 kb on - strandat 638.897 kb on + strandat 638.898 kb on - strandat 638.900 kb on - strandat 638.900 kb on - strandat 638.900 kb on - strandat 638.901 kb on + strandat 638.901 kb on + strandat 638.902 kb on - strandat 638.935 kb on + strand, within BACOVA_05158at 638.945 kb on + strand, within BACOVA_05158at 638.945 kb on + strand, within BACOVA_05158at 638.945 kb on + strand, within BACOVA_05158at 638.945 kb on - strand, within BACOVA_05158at 638.957 kb on - strand, within BACOVA_05158at 638.987 kb on + strand, within BACOVA_05158at 639.004 kb on + strand, within BACOVA_05158at 639.005 kb on - strand, within BACOVA_05158at 639.035 kb on + strand, within BACOVA_05158at 639.035 kb on + strand, within BACOVA_05158at 639.099 kb on + strand, within BACOVA_05158at 639.099 kb on + strand, within BACOVA_05158at 639.110 kb on - strand, within BACOVA_05158at 639.114 kb on + strand, within BACOVA_05158at 639.122 kb on + strand, within BACOVA_05158at 639.123 kb on - strand, within BACOVA_05158at 639.154 kb on - strand, within BACOVA_05158at 639.156 kb on + strand, within BACOVA_05158at 639.157 kb on - strand, within BACOVA_05158at 639.191 kb on - strand, within BACOVA_05158at 639.195 kb on - strand, within BACOVA_05158at 639.201 kb on + strand, within BACOVA_05158at 639.202 kb on - strand, within BACOVA_05158at 639.224 kb on - strand, within BACOVA_05158at 639.287 kb on + strand, within BACOVA_05158at 639.287 kb on + strand, within BACOVA_05158at 639.289 kb on + strand, within BACOVA_05158at 639.290 kb on - strand, within BACOVA_05158at 639.355 kb on - strand, within BACOVA_05158at 639.361 kb on + strand, within BACOVA_05158at 639.362 kb on - strand, within BACOVA_05158at 639.419 kb on + strand, within BACOVA_05158at 639.426 kb on + strand, within BACOVA_05158at 639.427 kb on - strand, within BACOVA_05158at 639.466 kb on + strand, within BACOVA_05158at 639.471 kb on - strand, within BACOVA_05158at 639.471 kb on - strand, within BACOVA_05158at 639.484 kb on - strand, within BACOVA_05158at 639.491 kb on - strand, within BACOVA_05158at 639.567 kb on + strand, within BACOVA_05158at 639.567 kb on + strand, within BACOVA_05158at 639.587 kb on + strand, within BACOVA_05158at 639.654 kb on + strand, within BACOVA_05158at 639.656 kb on + strand, within BACOVA_05158at 639.656 kb on + strand, within BACOVA_05158at 639.667 kb on + strand, within BACOVA_05158at 639.673 kb on + strand, within BACOVA_05158

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Lentilan from mushroom 2.5 mg/ml (C)
remove
637,638 + -0.8
637,639 - -0.5
637,639 - -0.2
637,668 + -0.2
637,698 - +0.0
637,698 - +0.1
637,817 + BACOVA_05157 0.14 -0.6
637,818 - BACOVA_05157 0.14 -0.4
637,885 + BACOVA_05157 0.22 +0.8
637,890 + BACOVA_05157 0.23 -0.9
637,890 + BACOVA_05157 0.23 -0.3
637,890 + BACOVA_05157 0.23 +0.7
637,890 + BACOVA_05157 0.23 -0.1
637,891 - BACOVA_05157 0.23 +0.5
637,891 - BACOVA_05157 0.23 -0.0
637,892 + BACOVA_05157 0.23 +0.1
637,892 + BACOVA_05157 0.23 -1.0
637,892 + BACOVA_05157 0.23 +1.1
637,893 - BACOVA_05157 0.23 +0.5
637,893 - BACOVA_05157 0.23 +0.8
637,895 - BACOVA_05157 0.23 -1.3
637,895 - BACOVA_05157 0.23 +0.6
637,895 - BACOVA_05157 0.23 +2.1
637,908 + BACOVA_05157 0.25 -0.1
637,921 - BACOVA_05157 0.27 +0.1
637,921 - BACOVA_05157 0.27 +1.4
637,954 + BACOVA_05157 0.31 +1.1
637,979 - BACOVA_05157 0.34 -0.4
637,987 - BACOVA_05157 0.35 -0.3
637,994 + BACOVA_05157 0.35 -0.1
638,033 + BACOVA_05157 0.40 -1.1
638,033 + BACOVA_05157 0.40 +0.9
638,034 - BACOVA_05157 0.40 -0.7
638,083 - BACOVA_05157 0.46 -0.5
638,083 - BACOVA_05157 0.46 +0.1
638,084 + BACOVA_05157 0.46 -0.3
638,085 - BACOVA_05157 0.46 -0.7
638,232 + BACOVA_05157 0.64 -0.2
638,234 + BACOVA_05157 0.64 +0.2
638,234 + BACOVA_05157 0.64 -0.1
638,234 + BACOVA_05157 0.64 +0.1
638,237 + BACOVA_05157 0.65 -1.5
638,250 + BACOVA_05157 0.66 +1.1
638,281 - BACOVA_05157 0.70 +0.4
638,281 - BACOVA_05157 0.70 +2.2
638,325 + BACOVA_05157 0.76 +0.7
638,326 - BACOVA_05157 0.76 -0.2
638,350 + BACOVA_05157 0.79 +0.6
638,350 + BACOVA_05157 0.79 +0.1
638,351 - BACOVA_05157 0.79 +0.7
638,381 - BACOVA_05157 0.82 -0.9
638,388 + BACOVA_05157 0.83 -0.1
638,428 - BACOVA_05157 0.88 +0.2
638,430 - BACOVA_05157 0.88 -0.3
638,466 - +0.5
638,466 - +0.6
638,466 - +0.3
638,475 + -0.5
638,476 - -0.5
638,478 + -0.0
638,479 - -0.4
638,491 - +0.1
638,522 + +0.3
638,523 - -0.4
638,523 - +1.7
638,536 + -1.0
638,540 - +0.1
638,583 + -0.2
638,590 - +1.1
638,591 + -0.5
638,591 + -0.3
638,592 - -0.9
638,592 - -0.0
638,595 + -1.3
638,595 + -0.8
638,596 - +0.5
638,596 - +0.1
638,596 - +0.7
638,597 + -0.3
638,639 + -0.5
638,648 - -0.3
638,676 + BACOVA_05159 0.27 +1.1
638,679 - BACOVA_05159 0.29 -1.1
638,679 - BACOVA_05159 0.29 +0.9
638,691 + BACOVA_05159 0.38 -1.0
638,703 + -0.5
638,724 + -0.7
638,729 + +0.8
638,739 + -1.3
638,787 + +0.2
638,832 + -0.1
638,832 + +0.1
638,833 - +0.5
638,862 - -1.0
638,895 + +1.1
638,896 - +1.4
638,896 - +0.5
638,897 + -0.7
638,898 - -1.9
638,900 - -0.0
638,900 - +0.1
638,900 - +0.8
638,901 + +0.1
638,901 + +1.0
638,902 - -1.1
638,935 + BACOVA_05158 0.11 +0.6
638,945 + BACOVA_05158 0.11 -0.1
638,945 + BACOVA_05158 0.11 +1.4
638,945 + BACOVA_05158 0.11 +0.2
638,945 - BACOVA_05158 0.11 +0.3
638,957 - BACOVA_05158 0.12 +0.7
638,987 + BACOVA_05158 0.13 -0.4
639,004 + BACOVA_05158 0.14 +0.4
639,005 - BACOVA_05158 0.14 -0.5
639,035 + BACOVA_05158 0.15 -0.2
639,035 + BACOVA_05158 0.15 -0.1
639,099 + BACOVA_05158 0.18 +1.1
639,099 + BACOVA_05158 0.18 -0.7
639,110 - BACOVA_05158 0.19 +0.3
639,114 + BACOVA_05158 0.19 +2.4
639,122 + BACOVA_05158 0.19 -0.5
639,123 - BACOVA_05158 0.19 -0.1
639,154 - BACOVA_05158 0.21 -0.5
639,156 + BACOVA_05158 0.21 +0.6
639,157 - BACOVA_05158 0.21 +0.4
639,191 - BACOVA_05158 0.23 -1.5
639,195 - BACOVA_05158 0.23 -0.4
639,201 + BACOVA_05158 0.23 +0.2
639,202 - BACOVA_05158 0.23 +1.1
639,224 - BACOVA_05158 0.24 +0.3
639,287 + BACOVA_05158 0.27 -1.1
639,287 + BACOVA_05158 0.27 -0.2
639,289 + BACOVA_05158 0.27 -0.1
639,290 - BACOVA_05158 0.27 -0.3
639,355 - BACOVA_05158 0.30 +0.2
639,361 + BACOVA_05158 0.30 -0.8
639,362 - BACOVA_05158 0.30 -0.2
639,419 + BACOVA_05158 0.33 +1.1
639,426 + BACOVA_05158 0.33 +0.1
639,427 - BACOVA_05158 0.33 -0.4
639,466 + BACOVA_05158 0.35 +0.1
639,471 - BACOVA_05158 0.35 -1.6
639,471 - BACOVA_05158 0.35 +0.3
639,484 - BACOVA_05158 0.36 -0.3
639,491 - BACOVA_05158 0.36 +1.9
639,567 + BACOVA_05158 0.40 +0.3
639,567 + BACOVA_05158 0.40 +1.1
639,587 + BACOVA_05158 0.40 +0.6
639,654 + BACOVA_05158 0.44 -0.2
639,656 + BACOVA_05158 0.44 -1.1
639,656 + BACOVA_05158 0.44 +0.2
639,667 + BACOVA_05158 0.44 -0.4
639,673 + BACOVA_05158 0.44 -0.1

Or see this region's nucleotide sequence