Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05243

Experiment: b-glucan from Barley 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_05242 and BACOVA_05243 are separated by 14 nucleotidesBACOVA_05243 and BACOVA_05244 overlap by 8 nucleotidesBACOVA_05244 and BACOVA_05245 are separated by 9 nucleotides BACOVA_05242: BACOVA_05242 - 4Fe-4S binding domain protein, at 741,425 to 743,425 _05242 BACOVA_05243: BACOVA_05243 - Methyl-viologen-reducing hydrogenase, delta subunit, at 743,440 to 743,913 _05243 BACOVA_05244: BACOVA_05244 - 4Fe-4S binding domain protein, at 743,906 to 744,706 _05244 BACOVA_05245: BACOVA_05245 - 4Fe-4S binding domain protein, at 744,716 to 745,729 _05245 Position (kb) 743 744Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 742.455 kb on - strand, within BACOVA_05242at 742.633 kb on + strand, within BACOVA_05242at 742.634 kb on - strand, within BACOVA_05242at 742.639 kb on - strand, within BACOVA_05242at 742.645 kb on + strand, within BACOVA_05242at 742.645 kb on + strand, within BACOVA_05242at 742.646 kb on - strand, within BACOVA_05242at 742.646 kb on - strand, within BACOVA_05242at 742.650 kb on - strand, within BACOVA_05242at 742.650 kb on - strand, within BACOVA_05242at 742.682 kb on - strand, within BACOVA_05242at 742.687 kb on - strand, within BACOVA_05242at 742.713 kb on - strand, within BACOVA_05242at 742.713 kb on - strand, within BACOVA_05242at 742.721 kb on - strand, within BACOVA_05242at 742.721 kb on - strand, within BACOVA_05242at 742.743 kb on - strand, within BACOVA_05242at 742.787 kb on + strand, within BACOVA_05242at 742.788 kb on - strand, within BACOVA_05242at 742.810 kb on + strand, within BACOVA_05242at 742.813 kb on - strand, within BACOVA_05242at 742.813 kb on - strand, within BACOVA_05242at 742.814 kb on + strand, within BACOVA_05242at 742.814 kb on + strand, within BACOVA_05242at 742.814 kb on + strand, within BACOVA_05242at 742.815 kb on - strand, within BACOVA_05242at 742.815 kb on - strand, within BACOVA_05242at 742.829 kb on - strand, within BACOVA_05242at 742.840 kb on + strand, within BACOVA_05242at 742.881 kb on + strand, within BACOVA_05242at 742.896 kb on + strand, within BACOVA_05242at 742.973 kb on + strand, within BACOVA_05242at 743.112 kb on + strand, within BACOVA_05242at 743.112 kb on + strand, within BACOVA_05242at 743.158 kb on - strand, within BACOVA_05242at 743.174 kb on - strand, within BACOVA_05242at 743.203 kb on - strand, within BACOVA_05242at 743.203 kb on - strand, within BACOVA_05242at 743.234 kb on + strandat 743.280 kb on + strandat 743.360 kb on - strandat 743.368 kb on - strandat 743.375 kb on + strandat 743.434 kb on + strandat 743.489 kb on + strand, within BACOVA_05243at 743.516 kb on - strand, within BACOVA_05243at 743.554 kb on + strand, within BACOVA_05243at 743.562 kb on + strand, within BACOVA_05243at 743.607 kb on + strand, within BACOVA_05243at 743.607 kb on + strand, within BACOVA_05243at 743.608 kb on - strand, within BACOVA_05243at 743.608 kb on - strand, within BACOVA_05243at 743.650 kb on - strand, within BACOVA_05243at 743.684 kb on - strand, within BACOVA_05243at 743.685 kb on + strand, within BACOVA_05243at 743.685 kb on + strand, within BACOVA_05243at 743.686 kb on - strand, within BACOVA_05243at 743.724 kb on - strand, within BACOVA_05243at 743.760 kb on - strand, within BACOVA_05243at 743.760 kb on - strand, within BACOVA_05243at 743.902 kb on - strandat 743.941 kb on - strandat 743.967 kb on + strandat 743.973 kb on - strandat 744.061 kb on + strand, within BACOVA_05244at 744.094 kb on - strand, within BACOVA_05244at 744.115 kb on + strand, within BACOVA_05244at 744.116 kb on - strand, within BACOVA_05244at 744.184 kb on + strand, within BACOVA_05244at 744.185 kb on - strand, within BACOVA_05244at 744.224 kb on - strand, within BACOVA_05244at 744.258 kb on - strand, within BACOVA_05244at 744.373 kb on + strand, within BACOVA_05244at 744.374 kb on - strand, within BACOVA_05244at 744.427 kb on + strand, within BACOVA_05244at 744.428 kb on - strand, within BACOVA_05244at 744.484 kb on + strand, within BACOVA_05244at 744.530 kb on - strand, within BACOVA_05244at 744.548 kb on - strand, within BACOVA_05244at 744.596 kb on - strand, within BACOVA_05244at 744.661 kb on - strandat 744.700 kb on - strandat 744.705 kb on - strandat 744.730 kb on + strandat 744.819 kb on + strand, within BACOVA_05245at 744.820 kb on - strand, within BACOVA_05245at 744.852 kb on + strand, within BACOVA_05245at 744.863 kb on + strand, within BACOVA_05245at 744.864 kb on - strand, within BACOVA_05245

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Per-strain Table

Position Strand Gene LocusTag Fraction b-glucan from Barley 2.5 mg/ml (C)
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742,455 - BACOVA_05242 0.51 +1.0
742,633 + BACOVA_05242 0.60 -1.2
742,634 - BACOVA_05242 0.60 -1.0
742,639 - BACOVA_05242 0.61 +0.8
742,645 + BACOVA_05242 0.61 +1.4
742,645 + BACOVA_05242 0.61 -0.7
742,646 - BACOVA_05242 0.61 +0.1
742,646 - BACOVA_05242 0.61 +1.2
742,650 - BACOVA_05242 0.61 -0.4
742,650 - BACOVA_05242 0.61 -1.9
742,682 - BACOVA_05242 0.63 +0.4
742,687 - BACOVA_05242 0.63 +0.4
742,713 - BACOVA_05242 0.64 +1.5
742,713 - BACOVA_05242 0.64 -0.9
742,721 - BACOVA_05242 0.65 -0.1
742,721 - BACOVA_05242 0.65 +0.3
742,743 - BACOVA_05242 0.66 -1.7
742,787 + BACOVA_05242 0.68 -0.1
742,788 - BACOVA_05242 0.68 +0.5
742,810 + BACOVA_05242 0.69 -0.2
742,813 - BACOVA_05242 0.69 -1.5
742,813 - BACOVA_05242 0.69 +0.7
742,814 + BACOVA_05242 0.69 -0.4
742,814 + BACOVA_05242 0.69 -1.8
742,814 + BACOVA_05242 0.69 -1.4
742,815 - BACOVA_05242 0.69 +0.3
742,815 - BACOVA_05242 0.69 +0.2
742,829 - BACOVA_05242 0.70 -1.1
742,840 + BACOVA_05242 0.71 +1.0
742,881 + BACOVA_05242 0.73 -2.9
742,896 + BACOVA_05242 0.74 -1.7
742,973 + BACOVA_05242 0.77 -1.3
743,112 + BACOVA_05242 0.84 -0.2
743,112 + BACOVA_05242 0.84 -0.6
743,158 - BACOVA_05242 0.87 -0.2
743,174 - BACOVA_05242 0.87 +1.8
743,203 - BACOVA_05242 0.89 -1.2
743,203 - BACOVA_05242 0.89 +1.7
743,234 + -1.4
743,280 + -1.0
743,360 - -0.8
743,368 - -0.4
743,375 + -1.6
743,434 + -0.2
743,489 + BACOVA_05243 0.10 -0.9
743,516 - BACOVA_05243 0.16 -1.6
743,554 + BACOVA_05243 0.24 +0.4
743,562 + BACOVA_05243 0.26 +0.4
743,607 + BACOVA_05243 0.35 +2.2
743,607 + BACOVA_05243 0.35 +0.2
743,608 - BACOVA_05243 0.35 -0.5
743,608 - BACOVA_05243 0.35 +0.8
743,650 - BACOVA_05243 0.44 +0.4
743,684 - BACOVA_05243 0.51 -1.4
743,685 + BACOVA_05243 0.52 -1.9
743,685 + BACOVA_05243 0.52 -0.6
743,686 - BACOVA_05243 0.52 -1.4
743,724 - BACOVA_05243 0.60 -0.4
743,760 - BACOVA_05243 0.68 -0.4
743,760 - BACOVA_05243 0.68 +0.4
743,902 - -0.5
743,941 - +1.1
743,967 + -1.4
743,973 - +0.8
744,061 + BACOVA_05244 0.19 -1.8
744,094 - BACOVA_05244 0.23 -0.9
744,115 + BACOVA_05244 0.26 -1.4
744,116 - BACOVA_05244 0.26 +0.9
744,184 + BACOVA_05244 0.35 -0.6
744,185 - BACOVA_05244 0.35 +0.7
744,224 - BACOVA_05244 0.40 -2.3
744,258 - BACOVA_05244 0.44 +0.1
744,373 + BACOVA_05244 0.58 -2.1
744,374 - BACOVA_05244 0.58 +0.3
744,427 + BACOVA_05244 0.65 +0.4
744,428 - BACOVA_05244 0.65 +0.4
744,484 + BACOVA_05244 0.72 -0.9
744,530 - BACOVA_05244 0.78 +0.9
744,548 - BACOVA_05244 0.80 +0.4
744,596 - BACOVA_05244 0.86 +1.1
744,661 - -2.1
744,700 - +0.1
744,705 - +0.6
744,730 + -0.0
744,819 + BACOVA_05245 0.10 -0.7
744,820 - BACOVA_05245 0.10 -0.6
744,852 + BACOVA_05245 0.13 -1.8
744,863 + BACOVA_05245 0.14 -0.4
744,864 - BACOVA_05245 0.15 -0.1

Or see this region's nucleotide sequence