Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03496

Experiment: b-glucan from Barley 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03495 and BACOVA_03496 are separated by 13 nucleotidesBACOVA_03496 and BACOVA_03497 are separated by 56 nucleotidesBACOVA_03497 and BACOVA_03498 overlap by 4 nucleotides BACOVA_03495: BACOVA_03495 - acetyltransferase, GNAT family, at 253,144 to 254,160 _03495 BACOVA_03496: BACOVA_03496 - hypothetical protein, at 254,174 to 255,091 _03496 BACOVA_03497: BACOVA_03497 - putative TIGR00659 family protein, at 255,148 to 255,843 _03497 BACOVA_03498: BACOVA_03498 - LrgA family protein, at 255,840 to 256,283 _03498 Position (kb) 254 255 256Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 253.186 kb on + strandat 253.210 kb on - strandat 253.222 kb on - strandat 253.255 kb on + strand, within BACOVA_03495at 253.383 kb on + strand, within BACOVA_03495at 253.383 kb on + strand, within BACOVA_03495at 253.383 kb on + strand, within BACOVA_03495at 253.383 kb on + strand, within BACOVA_03495at 253.393 kb on - strand, within BACOVA_03495at 253.397 kb on - strand, within BACOVA_03495at 253.432 kb on + strand, within BACOVA_03495at 253.432 kb on + strand, within BACOVA_03495at 253.433 kb on - strand, within BACOVA_03495at 253.487 kb on + strand, within BACOVA_03495at 253.531 kb on - strand, within BACOVA_03495at 253.545 kb on + strand, within BACOVA_03495at 253.545 kb on + strand, within BACOVA_03495at 253.546 kb on - strand, within BACOVA_03495at 253.546 kb on - strand, within BACOVA_03495at 253.546 kb on - strand, within BACOVA_03495at 253.547 kb on + strand, within BACOVA_03495at 253.547 kb on + strand, within BACOVA_03495at 253.547 kb on + strand, within BACOVA_03495at 253.547 kb on + strand, within BACOVA_03495at 253.549 kb on + strand, within BACOVA_03495at 253.550 kb on - strand, within BACOVA_03495at 253.598 kb on + strand, within BACOVA_03495at 253.627 kb on - strand, within BACOVA_03495at 253.627 kb on - strand, within BACOVA_03495at 253.627 kb on - strand, within BACOVA_03495at 253.630 kb on - strand, within BACOVA_03495at 253.660 kb on - strand, within BACOVA_03495at 253.660 kb on - strand, within BACOVA_03495at 253.687 kb on - strand, within BACOVA_03495at 253.701 kb on - strand, within BACOVA_03495at 253.806 kb on - strand, within BACOVA_03495at 253.820 kb on + strand, within BACOVA_03495at 253.867 kb on + strand, within BACOVA_03495at 253.948 kb on - strand, within BACOVA_03495at 253.963 kb on - strand, within BACOVA_03495at 253.963 kb on - strand, within BACOVA_03495at 253.963 kb on - strand, within BACOVA_03495at 253.965 kb on - strand, within BACOVA_03495at 253.975 kb on + strand, within BACOVA_03495at 254.029 kb on + strand, within BACOVA_03495at 254.071 kb on - strandat 254.072 kb on + strandat 254.072 kb on + strandat 254.072 kb on + strandat 254.072 kb on + strandat 254.073 kb on - strandat 254.087 kb on + strandat 254.140 kb on + strandat 254.140 kb on + strandat 254.141 kb on - strandat 254.161 kb on - strandat 254.167 kb on - strandat 254.176 kb on - strandat 254.182 kb on + strandat 254.220 kb on + strandat 254.221 kb on - strandat 254.304 kb on + strand, within BACOVA_03496at 254.305 kb on - strand, within BACOVA_03496at 254.305 kb on - strand, within BACOVA_03496at 254.308 kb on + strand, within BACOVA_03496at 254.308 kb on + strand, within BACOVA_03496at 254.308 kb on + strand, within BACOVA_03496at 254.308 kb on + strand, within BACOVA_03496at 254.309 kb on - strand, within BACOVA_03496at 254.310 kb on + strand, within BACOVA_03496at 254.340 kb on + strand, within BACOVA_03496at 254.345 kb on - strand, within BACOVA_03496at 254.345 kb on - strand, within BACOVA_03496at 254.345 kb on - strand, within BACOVA_03496at 254.350 kb on + strand, within BACOVA_03496at 254.355 kb on + strand, within BACOVA_03496at 254.356 kb on - strand, within BACOVA_03496at 254.387 kb on + strand, within BACOVA_03496at 254.431 kb on + strand, within BACOVA_03496at 254.432 kb on - strand, within BACOVA_03496at 254.447 kb on - strand, within BACOVA_03496at 254.563 kb on + strand, within BACOVA_03496at 254.563 kb on + strand, within BACOVA_03496at 254.563 kb on + strand, within BACOVA_03496at 254.620 kb on + strand, within BACOVA_03496at 254.621 kb on - strand, within BACOVA_03496at 254.622 kb on + strand, within BACOVA_03496at 254.623 kb on - strand, within BACOVA_03496at 254.623 kb on - strand, within BACOVA_03496at 254.638 kb on - strand, within BACOVA_03496at 254.659 kb on + strand, within BACOVA_03496at 254.718 kb on + strand, within BACOVA_03496at 254.722 kb on + strand, within BACOVA_03496at 254.724 kb on + strand, within BACOVA_03496at 254.733 kb on + strand, within BACOVA_03496at 254.749 kb on + strand, within BACOVA_03496at 254.794 kb on + strand, within BACOVA_03496at 254.798 kb on - strand, within BACOVA_03496at 254.816 kb on - strand, within BACOVA_03496at 254.864 kb on + strand, within BACOVA_03496at 254.899 kb on + strand, within BACOVA_03496at 254.899 kb on + strand, within BACOVA_03496at 254.900 kb on - strand, within BACOVA_03496at 254.900 kb on - strand, within BACOVA_03496at 254.901 kb on + strand, within BACOVA_03496at 254.902 kb on - strand, within BACOVA_03496at 254.902 kb on - strand, within BACOVA_03496at 254.970 kb on + strand, within BACOVA_03496at 254.970 kb on + strand, within BACOVA_03496at 254.971 kb on - strand, within BACOVA_03496at 254.971 kb on - strand, within BACOVA_03496at 254.972 kb on + strand, within BACOVA_03496at 254.986 kb on + strand, within BACOVA_03496at 255.079 kb on + strandat 255.120 kb on + strandat 255.120 kb on + strandat 255.120 kb on + strandat 255.120 kb on + strandat 255.121 kb on - strandat 255.161 kb on - strandat 255.177 kb on + strandat 255.178 kb on - strandat 255.178 kb on - strandat 255.184 kb on + strandat 255.185 kb on - strandat 255.209 kb on - strandat 255.231 kb on - strand, within BACOVA_03497at 255.376 kb on + strand, within BACOVA_03497at 255.383 kb on - strand, within BACOVA_03497at 255.383 kb on - strand, within BACOVA_03497at 255.421 kb on - strand, within BACOVA_03497at 255.431 kb on - strand, within BACOVA_03497at 255.481 kb on + strand, within BACOVA_03497at 255.482 kb on - strand, within BACOVA_03497at 255.567 kb on + strand, within BACOVA_03497at 255.567 kb on + strand, within BACOVA_03497at 255.568 kb on - strand, within BACOVA_03497at 255.605 kb on + strand, within BACOVA_03497at 255.605 kb on + strand, within BACOVA_03497at 255.606 kb on - strand, within BACOVA_03497at 255.607 kb on + strand, within BACOVA_03497at 255.607 kb on + strand, within BACOVA_03497at 255.608 kb on - strand, within BACOVA_03497at 255.608 kb on - strand, within BACOVA_03497at 255.613 kb on + strand, within BACOVA_03497at 255.669 kb on + strand, within BACOVA_03497at 255.670 kb on - strand, within BACOVA_03497at 255.672 kb on + strand, within BACOVA_03497at 255.672 kb on + strand, within BACOVA_03497at 255.673 kb on - strand, within BACOVA_03497at 255.674 kb on + strand, within BACOVA_03497at 255.715 kb on + strand, within BACOVA_03497at 255.716 kb on - strand, within BACOVA_03497at 255.716 kb on - strand, within BACOVA_03497at 255.736 kb on + strand, within BACOVA_03497at 255.736 kb on + strand, within BACOVA_03497at 255.736 kb on + strand, within BACOVA_03497at 255.738 kb on + strand, within BACOVA_03497at 255.739 kb on - strand, within BACOVA_03497at 255.745 kb on + strand, within BACOVA_03497at 255.745 kb on + strand, within BACOVA_03497at 255.745 kb on + strand, within BACOVA_03497at 255.745 kb on + strand, within BACOVA_03497at 255.746 kb on - strand, within BACOVA_03497at 255.746 kb on - strand, within BACOVA_03497at 255.804 kb on + strandat 255.833 kb on - strandat 255.875 kb on + strandat 255.876 kb on - strandat 255.883 kb on - strandat 255.973 kb on - strand, within BACOVA_03498at 255.973 kb on - strand, within BACOVA_03498at 255.993 kb on + strand, within BACOVA_03498at 255.993 kb on + strand, within BACOVA_03498at 255.994 kb on - strand, within BACOVA_03498at 256.016 kb on + strand, within BACOVA_03498at 256.016 kb on + strand, within BACOVA_03498at 256.016 kb on + strand, within BACOVA_03498at 256.016 kb on + strand, within BACOVA_03498at 256.017 kb on - strand, within BACOVA_03498at 256.017 kb on - strand, within BACOVA_03498at 256.017 kb on - strand, within BACOVA_03498at 256.017 kb on - strand, within BACOVA_03498at 256.017 kb on - strand, within BACOVA_03498at 256.049 kb on + strand, within BACOVA_03498at 256.050 kb on - strand, within BACOVA_03498at 256.067 kb on + strand, within BACOVA_03498at 256.067 kb on + strand, within BACOVA_03498

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Per-strain Table

Position Strand Gene LocusTag Fraction b-glucan from Barley 2.5 mg/ml (C)
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253,186 + -0.6
253,210 - +1.6
253,222 - -0.9
253,255 + BACOVA_03495 0.11 -0.3
253,383 + BACOVA_03495 0.24 -1.0
253,383 + BACOVA_03495 0.24 -1.5
253,383 + BACOVA_03495 0.24 +2.3
253,383 + BACOVA_03495 0.24 -0.3
253,393 - BACOVA_03495 0.24 -0.3
253,397 - BACOVA_03495 0.25 -0.0
253,432 + BACOVA_03495 0.28 -2.1
253,432 + BACOVA_03495 0.28 -0.8
253,433 - BACOVA_03495 0.28 -2.1
253,487 + BACOVA_03495 0.34 +0.2
253,531 - BACOVA_03495 0.38 +0.2
253,545 + BACOVA_03495 0.39 +1.0
253,545 + BACOVA_03495 0.39 +0.9
253,546 - BACOVA_03495 0.40 -0.5
253,546 - BACOVA_03495 0.40 -0.7
253,546 - BACOVA_03495 0.40 +0.3
253,547 + BACOVA_03495 0.40 +2.8
253,547 + BACOVA_03495 0.40 +1.2
253,547 + BACOVA_03495 0.40 -0.1
253,547 + BACOVA_03495 0.40 -2.7
253,549 + BACOVA_03495 0.40 +0.9
253,550 - BACOVA_03495 0.40 +1.0
253,598 + BACOVA_03495 0.45 +2.7
253,627 - BACOVA_03495 0.47 -0.8
253,627 - BACOVA_03495 0.47 -0.3
253,627 - BACOVA_03495 0.47 -0.3
253,630 - BACOVA_03495 0.48 -2.2
253,660 - BACOVA_03495 0.51 -1.6
253,660 - BACOVA_03495 0.51 +2.1
253,687 - BACOVA_03495 0.53 -1.3
253,701 - BACOVA_03495 0.55 -0.4
253,806 - BACOVA_03495 0.65 -2.5
253,820 + BACOVA_03495 0.66 -1.8
253,867 + BACOVA_03495 0.71 -0.7
253,948 - BACOVA_03495 0.79 -1.7
253,963 - BACOVA_03495 0.81 -0.3
253,963 - BACOVA_03495 0.81 -0.6
253,963 - BACOVA_03495 0.81 +0.3
253,965 - BACOVA_03495 0.81 -0.4
253,975 + BACOVA_03495 0.82 -0.1
254,029 + BACOVA_03495 0.87 +1.0
254,071 - -0.7
254,072 + -2.1
254,072 + -1.4
254,072 + -1.7
254,072 + +0.7
254,073 - -0.5
254,087 + -0.7
254,140 + +0.1
254,140 + -2.2
254,141 - -0.6
254,161 - -0.1
254,167 - -0.9
254,176 - -0.5
254,182 + +1.1
254,220 + +2.2
254,221 - +0.5
254,304 + BACOVA_03496 0.14 +0.8
254,305 - BACOVA_03496 0.14 -1.1
254,305 - BACOVA_03496 0.14 +0.8
254,308 + BACOVA_03496 0.15 +0.2
254,308 + BACOVA_03496 0.15 +0.5
254,308 + BACOVA_03496 0.15 +1.9
254,308 + BACOVA_03496 0.15 -0.2
254,309 - BACOVA_03496 0.15 -0.2
254,310 + BACOVA_03496 0.15 -0.1
254,340 + BACOVA_03496 0.18 -0.1
254,345 - BACOVA_03496 0.19 -0.4
254,345 - BACOVA_03496 0.19 +0.2
254,345 - BACOVA_03496 0.19 +1.5
254,350 + BACOVA_03496 0.19 +0.5
254,355 + BACOVA_03496 0.20 -0.3
254,356 - BACOVA_03496 0.20 -0.3
254,387 + BACOVA_03496 0.23 +0.4
254,431 + BACOVA_03496 0.28 -1.3
254,432 - BACOVA_03496 0.28 -0.0
254,447 - BACOVA_03496 0.30 -1.7
254,563 + BACOVA_03496 0.42 -1.1
254,563 + BACOVA_03496 0.42 -0.4
254,563 + BACOVA_03496 0.42 +1.0
254,620 + BACOVA_03496 0.49 -0.1
254,621 - BACOVA_03496 0.49 -0.5
254,622 + BACOVA_03496 0.49 -0.9
254,623 - BACOVA_03496 0.49 -2.4
254,623 - BACOVA_03496 0.49 -1.1
254,638 - BACOVA_03496 0.51 -0.1
254,659 + BACOVA_03496 0.53 +1.8
254,718 + BACOVA_03496 0.59 +2.1
254,722 + BACOVA_03496 0.60 -0.6
254,724 + BACOVA_03496 0.60 +0.2
254,733 + BACOVA_03496 0.61 -0.8
254,749 + BACOVA_03496 0.63 -1.2
254,794 + BACOVA_03496 0.68 -1.5
254,798 - BACOVA_03496 0.68 +0.2
254,816 - BACOVA_03496 0.70 -0.5
254,864 + BACOVA_03496 0.75 -0.6
254,899 + BACOVA_03496 0.79 -0.6
254,899 + BACOVA_03496 0.79 -1.1
254,900 - BACOVA_03496 0.79 +0.6
254,900 - BACOVA_03496 0.79 -1.1
254,901 + BACOVA_03496 0.79 +0.9
254,902 - BACOVA_03496 0.79 +1.0
254,902 - BACOVA_03496 0.79 +0.2
254,970 + BACOVA_03496 0.87 -1.9
254,970 + BACOVA_03496 0.87 -0.4
254,971 - BACOVA_03496 0.87 -0.7
254,971 - BACOVA_03496 0.87 -0.5
254,972 + BACOVA_03496 0.87 -0.2
254,986 + BACOVA_03496 0.88 -0.3
255,079 + -1.1
255,120 + -0.4
255,120 + -0.4
255,120 + -0.5
255,120 + +0.2
255,121 - -1.6
255,161 - -0.1
255,177 + +0.1
255,178 - +0.1
255,178 - +0.3
255,184 + -0.4
255,185 - -0.6
255,209 - -0.3
255,231 - BACOVA_03497 0.12 +1.1
255,376 + BACOVA_03497 0.33 +0.9
255,383 - BACOVA_03497 0.34 -2.3
255,383 - BACOVA_03497 0.34 -1.3
255,421 - BACOVA_03497 0.39 +0.1
255,431 - BACOVA_03497 0.41 +0.6
255,481 + BACOVA_03497 0.48 +1.2
255,482 - BACOVA_03497 0.48 -0.4
255,567 + BACOVA_03497 0.60 +0.0
255,567 + BACOVA_03497 0.60 -0.4
255,568 - BACOVA_03497 0.60 -2.8
255,605 + BACOVA_03497 0.66 +0.5
255,605 + BACOVA_03497 0.66 +1.5
255,606 - BACOVA_03497 0.66 -1.1
255,607 + BACOVA_03497 0.66 +1.5
255,607 + BACOVA_03497 0.66 -1.8
255,608 - BACOVA_03497 0.66 +0.5
255,608 - BACOVA_03497 0.66 -0.1
255,613 + BACOVA_03497 0.67 -0.1
255,669 + BACOVA_03497 0.75 -0.3
255,670 - BACOVA_03497 0.75 -1.1
255,672 + BACOVA_03497 0.75 -0.2
255,672 + BACOVA_03497 0.75 +1.9
255,673 - BACOVA_03497 0.75 -0.1
255,674 + BACOVA_03497 0.76 +1.7
255,715 + BACOVA_03497 0.81 +1.2
255,716 - BACOVA_03497 0.82 -0.4
255,716 - BACOVA_03497 0.82 +0.6
255,736 + BACOVA_03497 0.84 +0.5
255,736 + BACOVA_03497 0.84 +0.5
255,736 + BACOVA_03497 0.84 -2.6
255,738 + BACOVA_03497 0.85 +1.2
255,739 - BACOVA_03497 0.85 -1.0
255,745 + BACOVA_03497 0.86 +1.2
255,745 + BACOVA_03497 0.86 +1.4
255,745 + BACOVA_03497 0.86 -0.7
255,745 + BACOVA_03497 0.86 -1.2
255,746 - BACOVA_03497 0.86 +1.0
255,746 - BACOVA_03497 0.86 +1.0
255,804 + +1.5
255,833 - -0.1
255,875 + -2.2
255,876 - -1.1
255,883 - +1.3
255,973 - BACOVA_03498 0.30 +0.1
255,973 - BACOVA_03498 0.30 +1.7
255,993 + BACOVA_03498 0.34 -1.6
255,993 + BACOVA_03498 0.34 +0.2
255,994 - BACOVA_03498 0.35 -1.8
256,016 + BACOVA_03498 0.40 -1.4
256,016 + BACOVA_03498 0.40 -1.1
256,016 + BACOVA_03498 0.40 -0.8
256,016 + BACOVA_03498 0.40 -2.0
256,017 - BACOVA_03498 0.40 -0.8
256,017 - BACOVA_03498 0.40 +0.7
256,017 - BACOVA_03498 0.40 -0.4
256,017 - BACOVA_03498 0.40 +1.5
256,017 - BACOVA_03498 0.40 +0.3
256,049 + BACOVA_03498 0.47 +1.1
256,050 - BACOVA_03498 0.47 +0.8
256,067 + BACOVA_03498 0.51 -0.3
256,067 + BACOVA_03498 0.51 +0.8

Or see this region's nucleotide sequence