Experiment: b-glucan from Barley 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_02978 and BACOVA_02979 are separated by 18 nucleotides BACOVA_02979 and BACOVA_02980 are separated by 57 nucleotides BACOVA_02980 and BACOVA_02981 are separated by 0 nucleotides
BACOVA_02978: BACOVA_02978 - K+-transporting ATPase, A subunit, at 55,625 to 57,331
_02978
BACOVA_02979: BACOVA_02979 - K+-transporting ATPase, B subunit, at 57,350 to 59,383
_02979
BACOVA_02980: BACOVA_02980 - putative K+-transporting ATPase, C subunit, at 59,441 to 59,971
_02980
BACOVA_02981: BACOVA_02981 - hypothetical protein, at 59,972 to 60,856
_02981
Position (kb) 57
58
59
60 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 56.372 kb on - strand, within BACOVA_02978 at 56.376 kb on - strand, within BACOVA_02978 at 56.376 kb on - strand, within BACOVA_02978 at 56.376 kb on - strand, within BACOVA_02978 at 56.430 kb on + strand, within BACOVA_02978 at 56.431 kb on - strand, within BACOVA_02978 at 56.448 kb on - strand, within BACOVA_02978 at 56.476 kb on + strand, within BACOVA_02978 at 56.488 kb on - strand, within BACOVA_02978 at 56.488 kb on - strand, within BACOVA_02978 at 56.518 kb on + strand, within BACOVA_02978 at 56.522 kb on - strand, within BACOVA_02978 at 56.522 kb on - strand, within BACOVA_02978 at 56.680 kb on + strand, within BACOVA_02978 at 56.693 kb on - strand, within BACOVA_02978 at 56.695 kb on + strand, within BACOVA_02978 at 56.729 kb on - strand, within BACOVA_02978 at 56.738 kb on - strand, within BACOVA_02978 at 56.738 kb on - strand, within BACOVA_02978 at 56.777 kb on + strand, within BACOVA_02978 at 56.777 kb on + strand, within BACOVA_02978 at 56.778 kb on - strand, within BACOVA_02978 at 56.778 kb on - strand, within BACOVA_02978 at 56.782 kb on + strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.783 kb on - strand, within BACOVA_02978 at 56.889 kb on + strand, within BACOVA_02978 at 56.910 kb on + strand, within BACOVA_02978 at 56.939 kb on + strand, within BACOVA_02978 at 56.946 kb on - strand, within BACOVA_02978 at 56.946 kb on - strand, within BACOVA_02978 at 56.993 kb on - strand, within BACOVA_02978 at 56.993 kb on - strand, within BACOVA_02978 at 57.027 kb on - strand, within BACOVA_02978 at 57.032 kb on + strand, within BACOVA_02978 at 57.033 kb on - strand, within BACOVA_02978 at 57.082 kb on + strand, within BACOVA_02978 at 57.083 kb on - strand, within BACOVA_02978 at 57.085 kb on + strand, within BACOVA_02978 at 57.171 kb on + strand at 57.172 kb on - strand at 57.191 kb on - strand at 57.304 kb on + strand at 57.349 kb on + strand at 57.359 kb on - strand at 57.362 kb on - strand at 57.394 kb on - strand at 57.464 kb on - strand at 57.487 kb on + strand at 57.506 kb on + strand at 57.506 kb on + strand at 57.506 kb on + strand at 57.507 kb on - strand at 57.511 kb on + strand at 57.517 kb on - strand at 57.517 kb on - strand at 57.547 kb on + strand at 57.548 kb on - strand at 57.548 kb on - strand at 57.549 kb on - strand at 57.559 kb on + strand, within BACOVA_02979 at 57.560 kb on - strand, within BACOVA_02979 at 57.571 kb on + strand, within BACOVA_02979 at 57.572 kb on - strand, within BACOVA_02979 at 57.573 kb on + strand, within BACOVA_02979 at 57.574 kb on - strand, within BACOVA_02979 at 57.604 kb on + strand, within BACOVA_02979 at 57.605 kb on - strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.642 kb on + strand, within BACOVA_02979 at 57.646 kb on + strand, within BACOVA_02979 at 57.647 kb on - strand, within BACOVA_02979 at 57.688 kb on + strand, within BACOVA_02979 at 57.700 kb on + strand, within BACOVA_02979 at 57.732 kb on + strand, within BACOVA_02979 at 57.733 kb on - strand, within BACOVA_02979 at 57.733 kb on - strand, within BACOVA_02979 at 57.733 kb on - strand, within BACOVA_02979 at 57.814 kb on + strand, within BACOVA_02979 at 57.899 kb on - strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.900 kb on + strand, within BACOVA_02979 at 57.901 kb on - strand, within BACOVA_02979 at 58.025 kb on - strand, within BACOVA_02979 at 58.075 kb on + strand, within BACOVA_02979 at 58.075 kb on + strand, within BACOVA_02979 at 58.076 kb on - strand, within BACOVA_02979 at 58.076 kb on - strand, within BACOVA_02979 at 58.076 kb on - strand, within BACOVA_02979 at 58.138 kb on + strand, within BACOVA_02979 at 58.138 kb on + strand, within BACOVA_02979 at 58.139 kb on - strand, within BACOVA_02979 at 58.165 kb on + strand, within BACOVA_02979 at 58.175 kb on - strand, within BACOVA_02979 at 58.196 kb on - strand, within BACOVA_02979 at 58.225 kb on - strand, within BACOVA_02979 at 58.247 kb on - strand, within BACOVA_02979 at 58.251 kb on + strand, within BACOVA_02979 at 58.273 kb on + strand, within BACOVA_02979 at 58.274 kb on - strand, within BACOVA_02979 at 58.274 kb on - strand, within BACOVA_02979 at 58.276 kb on + strand, within BACOVA_02979 at 58.329 kb on + strand, within BACOVA_02979 at 58.427 kb on - strand, within BACOVA_02979 at 58.433 kb on - strand, within BACOVA_02979 at 58.456 kb on + strand, within BACOVA_02979 at 58.495 kb on + strand, within BACOVA_02979 at 58.496 kb on - strand, within BACOVA_02979 at 58.523 kb on - strand, within BACOVA_02979 at 58.604 kb on - strand, within BACOVA_02979 at 58.633 kb on - strand, within BACOVA_02979 at 58.635 kb on + strand, within BACOVA_02979 at 58.638 kb on + strand, within BACOVA_02979 at 58.639 kb on - strand, within BACOVA_02979 at 58.639 kb on - strand, within BACOVA_02979 at 58.639 kb on - strand, within BACOVA_02979 at 58.667 kb on - strand, within BACOVA_02979 at 58.681 kb on + strand, within BACOVA_02979 at 58.682 kb on - strand, within BACOVA_02979 at 58.682 kb on - strand, within BACOVA_02979 at 58.685 kb on - strand, within BACOVA_02979 at 58.745 kb on - strand, within BACOVA_02979 at 58.750 kb on - strand, within BACOVA_02979 at 58.778 kb on + strand, within BACOVA_02979 at 58.778 kb on + strand, within BACOVA_02979 at 58.779 kb on - strand, within BACOVA_02979 at 58.781 kb on - strand, within BACOVA_02979 at 58.781 kb on - strand, within BACOVA_02979 at 58.847 kb on - strand, within BACOVA_02979 at 58.871 kb on - strand, within BACOVA_02979 at 58.932 kb on + strand, within BACOVA_02979 at 58.932 kb on + strand, within BACOVA_02979 at 58.933 kb on - strand, within BACOVA_02979 at 58.949 kb on - strand, within BACOVA_02979 at 58.982 kb on - strand, within BACOVA_02979 at 59.059 kb on + strand, within BACOVA_02979 at 59.060 kb on - strand, within BACOVA_02979 at 59.069 kb on - strand, within BACOVA_02979 at 59.126 kb on - strand, within BACOVA_02979 at 59.126 kb on - strand, within BACOVA_02979 at 59.159 kb on - strand, within BACOVA_02979 at 59.209 kb on + strand at 59.209 kb on + strand at 59.316 kb on + strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.317 kb on - strand at 59.348 kb on - strand at 59.362 kb on - strand at 59.365 kb on - strand at 59.367 kb on + strand at 59.368 kb on - strand at 59.373 kb on + strand at 59.381 kb on + strand at 59.395 kb on + strand at 59.396 kb on - strand at 59.503 kb on + strand, within BACOVA_02980 at 59.503 kb on + strand, within BACOVA_02980 at 59.504 kb on - strand, within BACOVA_02980 at 59.504 kb on - strand, within BACOVA_02980 at 59.504 kb on - strand, within BACOVA_02980 at 59.506 kb on + strand, within BACOVA_02980 at 59.557 kb on + strand, within BACOVA_02980 at 59.561 kb on - strand, within BACOVA_02980 at 59.562 kb on + strand, within BACOVA_02980 at 59.576 kb on - strand, within BACOVA_02980 at 59.585 kb on - strand, within BACOVA_02980 at 59.624 kb on + strand, within BACOVA_02980 at 59.663 kb on - strand, within BACOVA_02980 at 59.715 kb on + strand, within BACOVA_02980 at 59.746 kb on - strand, within BACOVA_02980 at 59.789 kb on - strand, within BACOVA_02980 at 59.810 kb on + strand, within BACOVA_02980 at 59.811 kb on - strand, within BACOVA_02980 at 59.879 kb on - strand, within BACOVA_02980 at 59.887 kb on - strand, within BACOVA_02980 at 59.966 kb on - strand at 59.969 kb on + strand at 60.067 kb on + strand, within BACOVA_02981 at 60.068 kb on - strand, within BACOVA_02981 at 60.080 kb on - strand, within BACOVA_02981 at 60.085 kb on - strand, within BACOVA_02981 at 60.156 kb on + strand, within BACOVA_02981 at 60.166 kb on + strand, within BACOVA_02981 at 60.167 kb on - strand, within BACOVA_02981 at 60.167 kb on - strand, within BACOVA_02981 at 60.190 kb on + strand, within BACOVA_02981 at 60.193 kb on - strand, within BACOVA_02981 at 60.215 kb on + strand, within BACOVA_02981 at 60.219 kb on + strand, within BACOVA_02981 at 60.219 kb on + strand, within BACOVA_02981 at 60.229 kb on + strand, within BACOVA_02981 at 60.230 kb on - strand, within BACOVA_02981 at 60.230 kb on - strand, within BACOVA_02981 at 60.296 kb on - strand, within BACOVA_02981 at 60.313 kb on + strand, within BACOVA_02981 at 60.356 kb on + strand, within BACOVA_02981 at 60.357 kb on - strand, within BACOVA_02981 at 60.359 kb on - strand, within BACOVA_02981 at 60.359 kb on - strand, within BACOVA_02981
Per-strain Table
Position Strand Gene LocusTag Fraction b-glucan from Barley 2.5 mg/ml (C) remove 56,372 - BACOVA_02978 0.44 -0.0 56,376 - BACOVA_02978 0.44 +0.4 56,376 - BACOVA_02978 0.44 +0.7 56,376 - BACOVA_02978 0.44 -0.2 56,430 + BACOVA_02978 0.47 -0.2 56,431 - BACOVA_02978 0.47 -1.6 56,448 - BACOVA_02978 0.48 +3.1 56,476 + BACOVA_02978 0.50 -1.3 56,488 - BACOVA_02978 0.51 -0.4 56,488 - BACOVA_02978 0.51 +2.0 56,518 + BACOVA_02978 0.52 -0.3 56,522 - BACOVA_02978 0.53 -1.0 56,522 - BACOVA_02978 0.53 -0.2 56,680 + BACOVA_02978 0.62 -0.2 56,693 - BACOVA_02978 0.63 +0.1 56,695 + BACOVA_02978 0.63 -0.9 56,729 - BACOVA_02978 0.65 +1.2 56,738 - BACOVA_02978 0.65 -3.4 56,738 - BACOVA_02978 0.65 +1.5 56,777 + BACOVA_02978 0.67 -1.9 56,777 + BACOVA_02978 0.67 +1.0 56,778 - BACOVA_02978 0.68 +0.8 56,778 - BACOVA_02978 0.68 -1.6 56,782 + BACOVA_02978 0.68 -0.6 56,783 - BACOVA_02978 0.68 +0.4 56,783 - BACOVA_02978 0.68 -0.2 56,783 - BACOVA_02978 0.68 +0.5 56,783 - BACOVA_02978 0.68 -0.4 56,783 - BACOVA_02978 0.68 +1.1 56,889 + BACOVA_02978 0.74 +0.6 56,910 + BACOVA_02978 0.75 -1.6 56,939 + BACOVA_02978 0.77 -0.6 56,946 - BACOVA_02978 0.77 -0.2 56,946 - BACOVA_02978 0.77 -0.3 56,993 - BACOVA_02978 0.80 +0.2 56,993 - BACOVA_02978 0.80 +1.4 57,027 - BACOVA_02978 0.82 +0.7 57,032 + BACOVA_02978 0.82 -0.6 57,033 - BACOVA_02978 0.82 +1.8 57,082 + BACOVA_02978 0.85 +0.3 57,083 - BACOVA_02978 0.85 +0.9 57,085 + BACOVA_02978 0.86 -1.2 57,171 + +0.4 57,172 - +0.5 57,191 - +1.1 57,304 + +2.8 57,349 + +0.2 57,359 - -0.9 57,362 - -0.6 57,394 - +0.8 57,464 - +2.0 57,487 + -1.0 57,506 + -2.0 57,506 + -1.0 57,506 + +0.2 57,507 - -1.8 57,511 + -1.9 57,517 - -0.2 57,517 - -1.0 57,547 + +0.3 57,548 - -0.5 57,548 - -0.7 57,549 - -2.4 57,559 + BACOVA_02979 0.10 +0.8 57,560 - BACOVA_02979 0.10 -0.7 57,571 + BACOVA_02979 0.11 -1.2 57,572 - BACOVA_02979 0.11 +0.1 57,573 + BACOVA_02979 0.11 -0.4 57,574 - BACOVA_02979 0.11 +0.2 57,604 + BACOVA_02979 0.12 -0.3 57,605 - BACOVA_02979 0.13 -2.2 57,642 + BACOVA_02979 0.14 -1.2 57,642 + BACOVA_02979 0.14 -1.0 57,642 + BACOVA_02979 0.14 -2.0 57,642 + BACOVA_02979 0.14 +0.7 57,646 + BACOVA_02979 0.15 -0.3 57,647 - BACOVA_02979 0.15 +1.4 57,688 + BACOVA_02979 0.17 -0.7 57,700 + BACOVA_02979 0.17 +0.6 57,732 + BACOVA_02979 0.19 +1.1 57,733 - BACOVA_02979 0.19 -0.6 57,733 - BACOVA_02979 0.19 -0.2 57,733 - BACOVA_02979 0.19 -1.3 57,814 + BACOVA_02979 0.23 -1.6 57,899 - BACOVA_02979 0.27 +0.4 57,900 + BACOVA_02979 0.27 -0.2 57,900 + BACOVA_02979 0.27 -2.3 57,900 + BACOVA_02979 0.27 -0.3 57,900 + BACOVA_02979 0.27 +0.0 57,901 - BACOVA_02979 0.27 +0.3 58,025 - BACOVA_02979 0.33 -2.1 58,075 + BACOVA_02979 0.36 -0.2 58,075 + BACOVA_02979 0.36 -1.0 58,076 - BACOVA_02979 0.36 +3.6 58,076 - BACOVA_02979 0.36 -0.9 58,076 - BACOVA_02979 0.36 -2.3 58,138 + BACOVA_02979 0.39 +1.4 58,138 + BACOVA_02979 0.39 -1.3 58,139 - BACOVA_02979 0.39 -0.7 58,165 + BACOVA_02979 0.40 +2.2 58,175 - BACOVA_02979 0.41 -0.7 58,196 - BACOVA_02979 0.42 -1.2 58,225 - BACOVA_02979 0.43 +0.4 58,247 - BACOVA_02979 0.44 -1.5 58,251 + BACOVA_02979 0.44 -0.2 58,273 + BACOVA_02979 0.45 -0.2 58,274 - BACOVA_02979 0.45 +1.4 58,274 - BACOVA_02979 0.45 -1.4 58,276 + BACOVA_02979 0.46 -0.9 58,329 + BACOVA_02979 0.48 +0.0 58,427 - BACOVA_02979 0.53 -0.6 58,433 - BACOVA_02979 0.53 +0.7 58,456 + BACOVA_02979 0.54 +0.7 58,495 + BACOVA_02979 0.56 -0.6 58,496 - BACOVA_02979 0.56 -0.9 58,523 - BACOVA_02979 0.58 +2.0 58,604 - BACOVA_02979 0.62 -0.2 58,633 - BACOVA_02979 0.63 -2.7 58,635 + BACOVA_02979 0.63 +2.4 58,638 + BACOVA_02979 0.63 +0.7 58,639 - BACOVA_02979 0.63 -0.6 58,639 - BACOVA_02979 0.63 -0.4 58,639 - BACOVA_02979 0.63 -1.1 58,667 - BACOVA_02979 0.65 +0.6 58,681 + BACOVA_02979 0.65 +0.4 58,682 - BACOVA_02979 0.65 -0.4 58,682 - BACOVA_02979 0.65 +0.2 58,685 - BACOVA_02979 0.66 -0.5 58,745 - BACOVA_02979 0.69 +0.8 58,750 - BACOVA_02979 0.69 +4.0 58,778 + BACOVA_02979 0.70 +0.7 58,778 + BACOVA_02979 0.70 -0.9 58,779 - BACOVA_02979 0.70 +1.0 58,781 - BACOVA_02979 0.70 -1.7 58,781 - BACOVA_02979 0.70 -0.9 58,847 - BACOVA_02979 0.74 +0.0 58,871 - BACOVA_02979 0.75 +2.2 58,932 + BACOVA_02979 0.78 +1.4 58,932 + BACOVA_02979 0.78 +1.2 58,933 - BACOVA_02979 0.78 +1.8 58,949 - BACOVA_02979 0.79 +0.1 58,982 - BACOVA_02979 0.80 -0.2 59,059 + BACOVA_02979 0.84 +0.3 59,060 - BACOVA_02979 0.84 +0.9 59,069 - BACOVA_02979 0.85 -0.2 59,126 - BACOVA_02979 0.87 -0.6 59,126 - BACOVA_02979 0.87 -1.0 59,159 - BACOVA_02979 0.89 +0.4 59,209 + -1.2 59,209 + +0.4 59,316 + -0.2 59,317 - -3.1 59,317 - +0.3 59,317 - -0.4 59,317 - +0.8 59,317 - +0.6 59,317 - +0.5 59,348 - -0.0 59,362 - +3.4 59,365 - +1.8 59,367 + +0.9 59,368 - -0.8 59,373 + +0.4 59,381 + -0.6 59,395 + +0.8 59,396 - -0.2 59,503 + BACOVA_02980 0.12 -0.9 59,503 + BACOVA_02980 0.12 +0.6 59,504 - BACOVA_02980 0.12 -0.5 59,504 - BACOVA_02980 0.12 -0.0 59,504 - BACOVA_02980 0.12 -0.9 59,506 + BACOVA_02980 0.12 +1.0 59,557 + BACOVA_02980 0.22 +1.4 59,561 - BACOVA_02980 0.23 -0.2 59,562 + BACOVA_02980 0.23 -1.2 59,576 - BACOVA_02980 0.25 +0.6 59,585 - BACOVA_02980 0.27 +0.2 59,624 + BACOVA_02980 0.34 -2.4 59,663 - BACOVA_02980 0.42 -0.8 59,715 + BACOVA_02980 0.52 -1.7 59,746 - BACOVA_02980 0.57 -0.6 59,789 - BACOVA_02980 0.66 +1.2 59,810 + BACOVA_02980 0.69 -1.2 59,811 - BACOVA_02980 0.70 +0.5 59,879 - BACOVA_02980 0.82 +1.2 59,887 - BACOVA_02980 0.84 -0.2 59,966 - -0.8 59,969 + +0.4 60,067 + BACOVA_02981 0.11 -0.6 60,068 - BACOVA_02981 0.11 +0.4 60,080 - BACOVA_02981 0.12 +1.2 60,085 - BACOVA_02981 0.13 -0.5 60,156 + BACOVA_02981 0.21 +0.6 60,166 + BACOVA_02981 0.22 -0.3 60,167 - BACOVA_02981 0.22 +1.4 60,167 - BACOVA_02981 0.22 +0.8 60,190 + BACOVA_02981 0.25 -1.0 60,193 - BACOVA_02981 0.25 +0.1 60,215 + BACOVA_02981 0.27 -2.5 60,219 + BACOVA_02981 0.28 -0.4 60,219 + BACOVA_02981 0.28 +0.0 60,229 + BACOVA_02981 0.29 -0.1 60,230 - BACOVA_02981 0.29 +0.5 60,230 - BACOVA_02981 0.29 -1.0 60,296 - BACOVA_02981 0.37 +1.1 60,313 + BACOVA_02981 0.39 +1.3 60,356 + BACOVA_02981 0.43 -3.2 60,357 - BACOVA_02981 0.44 +1.3 60,359 - BACOVA_02981 0.44 +0.7 60,359 - BACOVA_02981 0.44 -0.3
Or see this region's nucleotide sequence