Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01749

Experiment: b-glucan from Barley 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_01748 and BACOVA_01749 are separated by 1 nucleotidesBACOVA_01749 and BACOVA_01750 are separated by 16 nucleotides BACOVA_01748: BACOVA_01748 - hypothetical protein, at 173,798 to 174,964 _01748 BACOVA_01749: BACOVA_01749 - hypothetical protein, at 174,966 to 175,934 _01749 BACOVA_01750: BACOVA_01750 - hypothetical protein, at 175,951 to 176,913 _01750 Position (kb) 174 175 176Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 174.069 kb on + strand, within BACOVA_01748at 174.153 kb on + strand, within BACOVA_01748at 174.154 kb on - strand, within BACOVA_01748at 174.156 kb on + strand, within BACOVA_01748at 174.157 kb on - strand, within BACOVA_01748at 174.159 kb on + strand, within BACOVA_01748at 174.159 kb on + strand, within BACOVA_01748at 174.181 kb on + strand, within BACOVA_01748at 174.181 kb on + strand, within BACOVA_01748at 174.181 kb on + strand, within BACOVA_01748at 174.213 kb on + strand, within BACOVA_01748at 174.215 kb on + strand, within BACOVA_01748at 174.225 kb on + strand, within BACOVA_01748at 174.301 kb on - strand, within BACOVA_01748at 174.355 kb on + strand, within BACOVA_01748at 174.356 kb on - strand, within BACOVA_01748at 174.361 kb on + strand, within BACOVA_01748at 174.361 kb on + strand, within BACOVA_01748at 174.361 kb on + strand, within BACOVA_01748at 174.413 kb on - strand, within BACOVA_01748at 174.415 kb on - strand, within BACOVA_01748at 174.418 kb on + strand, within BACOVA_01748at 174.434 kb on + strand, within BACOVA_01748at 174.436 kb on + strand, within BACOVA_01748at 174.437 kb on - strand, within BACOVA_01748at 174.437 kb on - strand, within BACOVA_01748at 174.439 kb on - strand, within BACOVA_01748at 174.440 kb on + strand, within BACOVA_01748at 174.474 kb on + strand, within BACOVA_01748at 174.474 kb on + strand, within BACOVA_01748at 174.475 kb on + strand, within BACOVA_01748at 174.483 kb on + strand, within BACOVA_01748at 174.555 kb on - strand, within BACOVA_01748at 174.555 kb on - strand, within BACOVA_01748at 174.555 kb on - strand, within BACOVA_01748at 174.589 kb on + strand, within BACOVA_01748at 174.626 kb on - strand, within BACOVA_01748at 174.626 kb on - strand, within BACOVA_01748at 174.626 kb on - strand, within BACOVA_01748at 174.627 kb on + strand, within BACOVA_01748at 174.627 kb on + strand, within BACOVA_01748at 174.628 kb on - strand, within BACOVA_01748at 174.629 kb on + strand, within BACOVA_01748at 174.630 kb on - strand, within BACOVA_01748at 174.631 kb on + strand, within BACOVA_01748at 174.631 kb on + strand, within BACOVA_01748at 174.631 kb on + strand, within BACOVA_01748at 174.631 kb on + strand, within BACOVA_01748at 174.632 kb on - strand, within BACOVA_01748at 174.636 kb on - strand, within BACOVA_01748at 174.638 kb on + strand, within BACOVA_01748at 174.740 kb on + strand, within BACOVA_01748at 174.740 kb on + strand, within BACOVA_01748at 174.762 kb on + strand, within BACOVA_01748at 174.789 kb on + strand, within BACOVA_01748at 174.833 kb on - strand, within BACOVA_01748at 174.833 kb on - strand, within BACOVA_01748at 174.861 kb on - strandat 174.891 kb on - strandat 174.894 kb on - strandat 174.924 kb on - strandat 175.003 kb on - strandat 175.041 kb on - strandat 175.056 kb on - strandat 175.063 kb on - strand, within BACOVA_01749at 175.079 kb on - strand, within BACOVA_01749at 175.094 kb on + strand, within BACOVA_01749at 175.121 kb on + strand, within BACOVA_01749at 175.121 kb on + strand, within BACOVA_01749at 175.143 kb on - strand, within BACOVA_01749at 175.218 kb on + strand, within BACOVA_01749at 175.218 kb on + strand, within BACOVA_01749at 175.219 kb on - strand, within BACOVA_01749at 175.219 kb on - strand, within BACOVA_01749at 175.219 kb on - strand, within BACOVA_01749at 175.223 kb on - strand, within BACOVA_01749at 175.261 kb on - strand, within BACOVA_01749at 175.264 kb on + strand, within BACOVA_01749at 175.277 kb on - strand, within BACOVA_01749at 175.306 kb on + strand, within BACOVA_01749at 175.312 kb on + strand, within BACOVA_01749at 175.356 kb on + strand, within BACOVA_01749at 175.357 kb on - strand, within BACOVA_01749at 175.423 kb on - strand, within BACOVA_01749at 175.449 kb on - strand, within BACOVA_01749at 175.458 kb on - strand, within BACOVA_01749at 175.460 kb on + strand, within BACOVA_01749at 175.463 kb on + strand, within BACOVA_01749at 175.514 kb on + strand, within BACOVA_01749at 175.517 kb on + strand, within BACOVA_01749at 175.542 kb on + strand, within BACOVA_01749at 175.543 kb on - strand, within BACOVA_01749at 175.587 kb on + strand, within BACOVA_01749at 175.667 kb on + strand, within BACOVA_01749at 175.726 kb on - strand, within BACOVA_01749at 175.752 kb on - strand, within BACOVA_01749at 175.755 kb on + strand, within BACOVA_01749at 175.757 kb on - strand, within BACOVA_01749at 175.759 kb on + strand, within BACOVA_01749at 175.762 kb on + strand, within BACOVA_01749at 175.762 kb on + strand, within BACOVA_01749at 175.764 kb on + strand, within BACOVA_01749at 175.764 kb on + strand, within BACOVA_01749at 175.764 kb on + strand, within BACOVA_01749at 175.767 kb on - strand, within BACOVA_01749at 175.775 kb on - strand, within BACOVA_01749at 175.778 kb on + strand, within BACOVA_01749at 175.841 kb on + strandat 175.852 kb on + strandat 175.856 kb on + strandat 175.857 kb on - strandat 175.857 kb on - strandat 175.875 kb on - strandat 175.923 kb on + strandat 175.924 kb on - strandat 175.924 kb on - strandat 175.929 kb on - strandat 175.929 kb on - strandat 175.933 kb on - strandat 175.940 kb on - strandat 175.947 kb on - strandat 175.947 kb on - strandat 175.950 kb on + strandat 175.956 kb on + strandat 175.957 kb on - strandat 175.968 kb on + strandat 175.979 kb on - strandat 176.000 kb on + strandat 176.029 kb on + strandat 176.035 kb on - strandat 176.038 kb on - strandat 176.038 kb on - strandat 176.055 kb on - strand, within BACOVA_01750at 176.084 kb on - strand, within BACOVA_01750at 176.084 kb on - strand, within BACOVA_01750at 176.108 kb on - strand, within BACOVA_01750at 176.112 kb on + strand, within BACOVA_01750at 176.113 kb on - strand, within BACOVA_01750at 176.149 kb on + strand, within BACOVA_01750at 176.150 kb on - strand, within BACOVA_01750at 176.190 kb on + strand, within BACOVA_01750at 176.196 kb on + strand, within BACOVA_01750at 176.269 kb on - strand, within BACOVA_01750at 176.269 kb on - strand, within BACOVA_01750at 176.287 kb on - strand, within BACOVA_01750at 176.287 kb on - strand, within BACOVA_01750at 176.345 kb on + strand, within BACOVA_01750at 176.381 kb on + strand, within BACOVA_01750at 176.384 kb on - strand, within BACOVA_01750at 176.401 kb on + strand, within BACOVA_01750at 176.402 kb on - strand, within BACOVA_01750at 176.517 kb on + strand, within BACOVA_01750at 176.541 kb on + strand, within BACOVA_01750at 176.547 kb on + strand, within BACOVA_01750at 176.547 kb on + strand, within BACOVA_01750at 176.548 kb on - strand, within BACOVA_01750at 176.548 kb on - strand, within BACOVA_01750at 176.560 kb on - strand, within BACOVA_01750at 176.575 kb on - strand, within BACOVA_01750at 176.575 kb on - strand, within BACOVA_01750at 176.575 kb on - strand, within BACOVA_01750at 176.578 kb on + strand, within BACOVA_01750at 176.578 kb on + strand, within BACOVA_01750at 176.610 kb on - strand, within BACOVA_01750at 176.612 kb on - strand, within BACOVA_01750at 176.625 kb on - strand, within BACOVA_01750at 176.638 kb on + strand, within BACOVA_01750at 176.639 kb on - strand, within BACOVA_01750at 176.644 kb on + strand, within BACOVA_01750at 176.675 kb on + strand, within BACOVA_01750at 176.691 kb on - strand, within BACOVA_01750at 176.791 kb on + strand, within BACOVA_01750at 176.792 kb on - strand, within BACOVA_01750at 176.802 kb on + strand, within BACOVA_01750at 176.823 kb on + strandat 176.824 kb on - strandat 176.830 kb on - strandat 176.836 kb on + strandat 176.837 kb on - strandat 176.842 kb on - strandat 176.842 kb on - strandat 176.878 kb on - strandat 176.883 kb on + strandat 176.901 kb on + strandat 176.918 kb on + strandat 176.922 kb on - strandat 176.922 kb on - strandat 176.922 kb on - strandat 176.926 kb on + strandat 176.927 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction b-glucan from Barley 2.5 mg/ml (C)
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174,069 + BACOVA_01748 0.23 -1.5
174,153 + BACOVA_01748 0.30 -1.2
174,154 - BACOVA_01748 0.31 -1.6
174,156 + BACOVA_01748 0.31 +0.7
174,157 - BACOVA_01748 0.31 +1.0
174,159 + BACOVA_01748 0.31 -0.8
174,159 + BACOVA_01748 0.31 +0.8
174,181 + BACOVA_01748 0.33 +2.2
174,181 + BACOVA_01748 0.33 -0.9
174,181 + BACOVA_01748 0.33 -1.0
174,213 + BACOVA_01748 0.36 -0.1
174,215 + BACOVA_01748 0.36 +0.2
174,225 + BACOVA_01748 0.37 +1.8
174,301 - BACOVA_01748 0.43 -0.9
174,355 + BACOVA_01748 0.48 -1.2
174,356 - BACOVA_01748 0.48 +0.2
174,361 + BACOVA_01748 0.48 -0.3
174,361 + BACOVA_01748 0.48 +0.9
174,361 + BACOVA_01748 0.48 -0.8
174,413 - BACOVA_01748 0.53 +0.0
174,415 - BACOVA_01748 0.53 +0.0
174,418 + BACOVA_01748 0.53 +1.2
174,434 + BACOVA_01748 0.54 -2.6
174,436 + BACOVA_01748 0.55 +0.9
174,437 - BACOVA_01748 0.55 +1.8
174,437 - BACOVA_01748 0.55 -0.6
174,439 - BACOVA_01748 0.55 -1.6
174,440 + BACOVA_01748 0.55 -0.9
174,474 + BACOVA_01748 0.58 -2.2
174,474 + BACOVA_01748 0.58 +0.4
174,475 + BACOVA_01748 0.58 -2.1
174,483 + BACOVA_01748 0.59 +0.2
174,555 - BACOVA_01748 0.65 +1.2
174,555 - BACOVA_01748 0.65 -3.3
174,555 - BACOVA_01748 0.65 +0.8
174,589 + BACOVA_01748 0.68 -0.9
174,626 - BACOVA_01748 0.71 -0.1
174,626 - BACOVA_01748 0.71 +0.5
174,626 - BACOVA_01748 0.71 -1.1
174,627 + BACOVA_01748 0.71 +0.7
174,627 + BACOVA_01748 0.71 +0.0
174,628 - BACOVA_01748 0.71 +0.8
174,629 + BACOVA_01748 0.71 +1.8
174,630 - BACOVA_01748 0.71 +1.2
174,631 + BACOVA_01748 0.71 +2.2
174,631 + BACOVA_01748 0.71 -0.4
174,631 + BACOVA_01748 0.71 -0.1
174,631 + BACOVA_01748 0.71 +2.2
174,632 - BACOVA_01748 0.71 +1.0
174,636 - BACOVA_01748 0.72 +0.9
174,638 + BACOVA_01748 0.72 +1.0
174,740 + BACOVA_01748 0.81 +0.1
174,740 + BACOVA_01748 0.81 -0.6
174,762 + BACOVA_01748 0.83 +0.8
174,789 + BACOVA_01748 0.85 +0.7
174,833 - BACOVA_01748 0.89 -0.2
174,833 - BACOVA_01748 0.89 -0.5
174,861 - +0.4
174,891 - -0.8
174,894 - -0.2
174,924 - +0.7
175,003 - +0.2
175,041 - -0.9
175,056 - +0.7
175,063 - BACOVA_01749 0.10 -0.3
175,079 - BACOVA_01749 0.12 +0.2
175,094 + BACOVA_01749 0.13 +3.0
175,121 + BACOVA_01749 0.16 +0.9
175,121 + BACOVA_01749 0.16 -1.1
175,143 - BACOVA_01749 0.18 -0.8
175,218 + BACOVA_01749 0.26 +1.7
175,218 + BACOVA_01749 0.26 +0.4
175,219 - BACOVA_01749 0.26 +0.2
175,219 - BACOVA_01749 0.26 +0.2
175,219 - BACOVA_01749 0.26 -0.8
175,223 - BACOVA_01749 0.27 -0.9
175,261 - BACOVA_01749 0.30 -0.1
175,264 + BACOVA_01749 0.31 +0.2
175,277 - BACOVA_01749 0.32 -0.6
175,306 + BACOVA_01749 0.35 +0.4
175,312 + BACOVA_01749 0.36 -0.8
175,356 + BACOVA_01749 0.40 -0.5
175,357 - BACOVA_01749 0.40 -3.5
175,423 - BACOVA_01749 0.47 +0.2
175,449 - BACOVA_01749 0.50 +0.7
175,458 - BACOVA_01749 0.51 +0.2
175,460 + BACOVA_01749 0.51 -1.8
175,463 + BACOVA_01749 0.51 +0.5
175,514 + BACOVA_01749 0.57 -0.9
175,517 + BACOVA_01749 0.57 -1.0
175,542 + BACOVA_01749 0.59 -0.4
175,543 - BACOVA_01749 0.60 +0.9
175,587 + BACOVA_01749 0.64 +0.8
175,667 + BACOVA_01749 0.72 +1.7
175,726 - BACOVA_01749 0.78 +1.6
175,752 - BACOVA_01749 0.81 -2.9
175,755 + BACOVA_01749 0.81 -1.2
175,757 - BACOVA_01749 0.82 +0.2
175,759 + BACOVA_01749 0.82 +0.7
175,762 + BACOVA_01749 0.82 -0.3
175,762 + BACOVA_01749 0.82 -0.8
175,764 + BACOVA_01749 0.82 -1.3
175,764 + BACOVA_01749 0.82 -1.1
175,764 + BACOVA_01749 0.82 -0.8
175,767 - BACOVA_01749 0.83 +1.9
175,775 - BACOVA_01749 0.83 +0.1
175,778 + BACOVA_01749 0.84 +0.7
175,841 + -1.7
175,852 + -0.9
175,856 + -1.3
175,857 - +0.4
175,857 - +1.5
175,875 - +1.9
175,923 + +0.9
175,924 - +0.0
175,924 - -0.6
175,929 - -1.6
175,929 - +0.2
175,933 - +0.8
175,940 - +0.0
175,947 - +1.9
175,947 - -0.1
175,950 + +0.7
175,956 + -0.3
175,957 - +2.0
175,968 + +0.2
175,979 - +0.7
176,000 + +0.1
176,029 + +0.4
176,035 - +0.2
176,038 - +0.0
176,038 - +1.8
176,055 - BACOVA_01750 0.11 +1.1
176,084 - BACOVA_01750 0.14 -0.2
176,084 - BACOVA_01750 0.14 -0.4
176,108 - BACOVA_01750 0.16 -0.3
176,112 + BACOVA_01750 0.17 +0.1
176,113 - BACOVA_01750 0.17 +1.7
176,149 + BACOVA_01750 0.21 +0.0
176,150 - BACOVA_01750 0.21 -0.2
176,190 + BACOVA_01750 0.25 -0.1
176,196 + BACOVA_01750 0.25 -1.5
176,269 - BACOVA_01750 0.33 +0.3
176,269 - BACOVA_01750 0.33 +1.7
176,287 - BACOVA_01750 0.35 +0.8
176,287 - BACOVA_01750 0.35 -0.3
176,345 + BACOVA_01750 0.41 -0.9
176,381 + BACOVA_01750 0.45 +1.3
176,384 - BACOVA_01750 0.45 -0.5
176,401 + BACOVA_01750 0.47 -1.1
176,402 - BACOVA_01750 0.47 -0.3
176,517 + BACOVA_01750 0.59 -1.2
176,541 + BACOVA_01750 0.61 +0.2
176,547 + BACOVA_01750 0.62 -0.3
176,547 + BACOVA_01750 0.62 -0.2
176,548 - BACOVA_01750 0.62 -0.0
176,548 - BACOVA_01750 0.62 +1.1
176,560 - BACOVA_01750 0.63 -1.8
176,575 - BACOVA_01750 0.65 -1.8
176,575 - BACOVA_01750 0.65 -1.1
176,575 - BACOVA_01750 0.65 -1.1
176,578 + BACOVA_01750 0.65 -0.8
176,578 + BACOVA_01750 0.65 +0.9
176,610 - BACOVA_01750 0.68 -1.0
176,612 - BACOVA_01750 0.69 +0.7
176,625 - BACOVA_01750 0.70 +1.6
176,638 + BACOVA_01750 0.71 -1.5
176,639 - BACOVA_01750 0.71 -0.3
176,644 + BACOVA_01750 0.72 +0.2
176,675 + BACOVA_01750 0.75 -2.3
176,691 - BACOVA_01750 0.77 +0.6
176,791 + BACOVA_01750 0.87 +0.3
176,792 - BACOVA_01750 0.87 -0.9
176,802 + BACOVA_01750 0.88 -0.2
176,823 + +1.0
176,824 - -1.6
176,830 - -0.2
176,836 + -0.1
176,837 - +0.5
176,842 - +1.2
176,842 - +0.5
176,878 - -0.9
176,883 + -0.8
176,901 + +0.5
176,918 + +0.2
176,922 - -2.7
176,922 - -1.0
176,922 - -0.3
176,926 + -0.3
176,927 - +0.6

Or see this region's nucleotide sequence