Experiment: b-Glucan from Oat 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04191 and BACOVA_04192 are separated by 277 nucleotides BACOVA_04192 and BACOVA_04193 are separated by 218 nucleotides BACOVA_04193 and BACOVA_04194 are separated by 303 nucleotides
BACOVA_04191: BACOVA_04191 - transcriptional regulator, GntR family, at 68,180 to 68,950
_04191
BACOVA_04192: BACOVA_04192 - YbaK/proline--tRNA ligase associated domain protein, at 69,228 to 69,791
_04192
BACOVA_04193: BACOVA_04193 - hypothetical protein, at 70,010 to 70,114
_04193
BACOVA_04194: BACOVA_04194 - efflux ABC transporter, permease protein, at 70,418 to 72,838
_04194
Position (kb)
69
70 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 68.245 kb on + strand at 68.255 kb on - strand at 68.256 kb on + strand at 68.314 kb on + strand, within BACOVA_04191 at 68.314 kb on + strand, within BACOVA_04191 at 68.338 kb on + strand, within BACOVA_04191 at 68.339 kb on - strand, within BACOVA_04191 at 68.339 kb on - strand, within BACOVA_04191 at 68.356 kb on + strand, within BACOVA_04191 at 68.368 kb on + strand, within BACOVA_04191 at 68.369 kb on - strand, within BACOVA_04191 at 68.381 kb on + strand, within BACOVA_04191 at 68.409 kb on + strand, within BACOVA_04191 at 68.417 kb on + strand, within BACOVA_04191 at 68.420 kb on - strand, within BACOVA_04191 at 68.420 kb on - strand, within BACOVA_04191 at 68.450 kb on + strand, within BACOVA_04191 at 68.450 kb on + strand, within BACOVA_04191 at 68.456 kb on - strand, within BACOVA_04191 at 68.473 kb on - strand, within BACOVA_04191 at 68.482 kb on + strand, within BACOVA_04191 at 68.566 kb on + strand, within BACOVA_04191 at 68.567 kb on - strand, within BACOVA_04191 at 68.567 kb on - strand, within BACOVA_04191 at 68.580 kb on - strand, within BACOVA_04191 at 68.584 kb on + strand, within BACOVA_04191 at 68.675 kb on + strand, within BACOVA_04191 at 68.676 kb on - strand, within BACOVA_04191 at 68.676 kb on - strand, within BACOVA_04191 at 68.805 kb on - strand, within BACOVA_04191 at 68.871 kb on + strand, within BACOVA_04191 at 68.875 kb on + strand at 68.875 kb on + strand at 68.875 kb on + strand at 68.876 kb on - strand at 68.876 kb on - strand at 68.879 kb on + strand at 68.880 kb on - strand at 68.932 kb on + strand at 68.935 kb on + strand at 68.935 kb on + strand at 68.986 kb on + strand at 69.009 kb on - strand at 69.020 kb on - strand at 69.068 kb on - strand at 69.121 kb on - strand at 69.121 kb on - strand at 69.133 kb on + strand at 69.133 kb on + strand at 69.137 kb on + strand at 69.137 kb on + strand at 69.140 kb on + strand at 69.161 kb on + strand at 69.162 kb on - strand at 69.213 kb on - strand at 69.227 kb on + strand at 69.227 kb on + strand at 69.234 kb on - strand at 69.238 kb on + strand at 69.239 kb on - strand at 69.245 kb on + strand at 69.246 kb on - strand at 69.246 kb on - strand at 69.274 kb on - strand at 69.295 kb on - strand, within BACOVA_04192 at 69.322 kb on - strand, within BACOVA_04192 at 69.322 kb on - strand, within BACOVA_04192 at 69.403 kb on + strand, within BACOVA_04192 at 69.422 kb on + strand, within BACOVA_04192 at 69.423 kb on - strand, within BACOVA_04192 at 69.423 kb on - strand, within BACOVA_04192 at 69.452 kb on + strand, within BACOVA_04192 at 69.453 kb on - strand, within BACOVA_04192 at 69.478 kb on + strand, within BACOVA_04192 at 69.526 kb on + strand, within BACOVA_04192 at 69.527 kb on - strand, within BACOVA_04192 at 69.527 kb on - strand, within BACOVA_04192 at 69.527 kb on - strand, within BACOVA_04192 at 69.530 kb on + strand, within BACOVA_04192 at 69.531 kb on - strand, within BACOVA_04192 at 69.582 kb on - strand, within BACOVA_04192 at 69.607 kb on + strand, within BACOVA_04192 at 69.608 kb on - strand, within BACOVA_04192 at 69.614 kb on + strand, within BACOVA_04192 at 69.614 kb on + strand, within BACOVA_04192 at 69.615 kb on - strand, within BACOVA_04192 at 69.623 kb on + strand, within BACOVA_04192 at 69.637 kb on + strand, within BACOVA_04192 at 69.638 kb on - strand, within BACOVA_04192 at 69.654 kb on - strand, within BACOVA_04192 at 69.675 kb on + strand, within BACOVA_04192 at 69.675 kb on + strand, within BACOVA_04192 at 69.675 kb on + strand, within BACOVA_04192 at 69.676 kb on - strand, within BACOVA_04192 at 69.676 kb on - strand, within BACOVA_04192 at 69.676 kb on - strand, within BACOVA_04192 at 69.677 kb on + strand, within BACOVA_04192 at 69.678 kb on - strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.679 kb on + strand, within BACOVA_04192 at 69.680 kb on - strand, within BACOVA_04192 at 69.697 kb on + strand, within BACOVA_04192 at 69.698 kb on - strand, within BACOVA_04192 at 69.698 kb on - strand, within BACOVA_04192 at 69.743 kb on - strand at 69.743 kb on - strand at 69.746 kb on - strand at 69.746 kb on - strand at 69.746 kb on - strand at 69.789 kb on + strand at 69.836 kb on + strand at 69.837 kb on - strand at 69.858 kb on + strand at 69.859 kb on - strand at 69.863 kb on + strand at 69.863 kb on + strand at 69.863 kb on + strand at 69.864 kb on - strand at 70.002 kb on + strand at 70.012 kb on - strand at 70.047 kb on + strand, within BACOVA_04193 at 70.116 kb on + strand at 70.116 kb on + strand at 70.116 kb on + strand at 70.131 kb on - strand at 70.199 kb on - strand at 70.210 kb on - strand at 70.214 kb on - strand at 70.293 kb on - strand at 70.293 kb on - strand at 70.317 kb on - strand at 70.321 kb on + strand at 70.326 kb on + strand at 70.327 kb on - strand at 70.329 kb on - strand at 70.341 kb on + strand at 70.341 kb on + strand at 70.406 kb on + strand at 70.455 kb on - strand at 70.511 kb on + strand at 70.517 kb on + strand at 70.517 kb on + strand at 70.517 kb on + strand at 70.517 kb on + strand at 70.521 kb on - strand at 70.521 kb on - strand at 70.523 kb on - strand at 70.523 kb on - strand at 70.565 kb on + strand at 70.579 kb on + strand at 70.579 kb on + strand at 70.604 kb on + strand at 70.605 kb on - strand at 70.605 kb on - strand at 70.606 kb on + strand at 70.606 kb on + strand at 70.688 kb on - strand, within BACOVA_04194 at 70.691 kb on + strand, within BACOVA_04194 at 70.692 kb on - strand, within BACOVA_04194 at 70.692 kb on - strand, within BACOVA_04194 at 70.733 kb on + strand, within BACOVA_04194 at 70.759 kb on + strand, within BACOVA_04194
Per-strain Table
Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/ml (C) remove 68,245 + -0.0 68,255 - +0.6 68,256 + -0.5 68,314 + BACOVA_04191 0.17 +1.3 68,314 + BACOVA_04191 0.17 -1.4 68,338 + BACOVA_04191 0.20 +0.4 68,339 - BACOVA_04191 0.21 -1.4 68,339 - BACOVA_04191 0.21 -1.5 68,356 + BACOVA_04191 0.23 -1.5 68,368 + BACOVA_04191 0.24 +0.6 68,369 - BACOVA_04191 0.25 -0.3 68,381 + BACOVA_04191 0.26 +0.3 68,409 + BACOVA_04191 0.30 -0.5 68,417 + BACOVA_04191 0.31 +1.4 68,420 - BACOVA_04191 0.31 +0.5 68,420 - BACOVA_04191 0.31 -0.9 68,450 + BACOVA_04191 0.35 +1.4 68,450 + BACOVA_04191 0.35 +0.4 68,456 - BACOVA_04191 0.36 -0.5 68,473 - BACOVA_04191 0.38 +0.1 68,482 + BACOVA_04191 0.39 +0.1 68,566 + BACOVA_04191 0.50 -0.5 68,567 - BACOVA_04191 0.50 -0.2 68,567 - BACOVA_04191 0.50 -0.7 68,580 - BACOVA_04191 0.52 -0.8 68,584 + BACOVA_04191 0.52 +0.3 68,675 + BACOVA_04191 0.64 +0.7 68,676 - BACOVA_04191 0.64 +0.9 68,676 - BACOVA_04191 0.64 -0.6 68,805 - BACOVA_04191 0.81 +0.3 68,871 + BACOVA_04191 0.90 +0.6 68,875 + -0.3 68,875 + -1.7 68,875 + +0.1 68,876 - -0.7 68,876 - -1.4 68,879 + +1.5 68,880 - +0.3 68,932 + -0.9 68,935 + -0.6 68,935 + +0.5 68,986 + -2.1 69,009 - -0.9 69,020 - -0.1 69,068 - +0.5 69,121 - -0.6 69,121 - -0.9 69,133 + +0.8 69,133 + +0.6 69,137 + -1.8 69,137 + -0.3 69,140 + -0.3 69,161 + -0.5 69,162 - -2.7 69,213 - -3.6 69,227 + +0.2 69,227 + +0.1 69,234 - -0.5 69,238 + -0.8 69,239 - -1.7 69,245 + +2.1 69,246 - +0.6 69,246 - -0.4 69,274 - -1.3 69,295 - BACOVA_04192 0.12 -0.1 69,322 - BACOVA_04192 0.17 -0.2 69,322 - BACOVA_04192 0.17 -1.2 69,403 + BACOVA_04192 0.31 -1.7 69,422 + BACOVA_04192 0.34 +1.6 69,423 - BACOVA_04192 0.35 -1.1 69,423 - BACOVA_04192 0.35 -0.9 69,452 + BACOVA_04192 0.40 +2.0 69,453 - BACOVA_04192 0.40 -0.4 69,478 + BACOVA_04192 0.44 -0.2 69,526 + BACOVA_04192 0.53 -0.9 69,527 - BACOVA_04192 0.53 -0.7 69,527 - BACOVA_04192 0.53 -1.6 69,527 - BACOVA_04192 0.53 +0.6 69,530 + BACOVA_04192 0.54 -0.7 69,531 - BACOVA_04192 0.54 -0.3 69,582 - BACOVA_04192 0.63 -1.1 69,607 + BACOVA_04192 0.67 +1.5 69,608 - BACOVA_04192 0.67 -0.1 69,614 + BACOVA_04192 0.68 +1.1 69,614 + BACOVA_04192 0.68 -0.2 69,615 - BACOVA_04192 0.69 -0.5 69,623 + BACOVA_04192 0.70 -0.1 69,637 + BACOVA_04192 0.73 +0.2 69,638 - BACOVA_04192 0.73 +0.1 69,654 - BACOVA_04192 0.76 +0.4 69,675 + BACOVA_04192 0.79 +0.1 69,675 + BACOVA_04192 0.79 -0.2 69,675 + BACOVA_04192 0.79 +0.2 69,676 - BACOVA_04192 0.79 +0.3 69,676 - BACOVA_04192 0.79 -1.5 69,676 - BACOVA_04192 0.79 +0.1 69,677 + BACOVA_04192 0.80 -0.4 69,678 - BACOVA_04192 0.80 +0.5 69,679 + BACOVA_04192 0.80 -1.7 69,679 + BACOVA_04192 0.80 -0.7 69,679 + BACOVA_04192 0.80 +2.3 69,679 + BACOVA_04192 0.80 +0.1 69,680 - BACOVA_04192 0.80 +0.4 69,697 + BACOVA_04192 0.83 +1.9 69,698 - BACOVA_04192 0.83 -0.1 69,698 - BACOVA_04192 0.83 +0.5 69,743 - -0.6 69,743 - +0.7 69,746 - -0.4 69,746 - -0.7 69,746 - -0.7 69,789 + +0.1 69,836 + -1.0 69,837 - +1.1 69,858 + -0.5 69,859 - +0.1 69,863 + +0.2 69,863 + +1.5 69,863 + -0.9 69,864 - -0.9 70,002 + +2.3 70,012 - +0.8 70,047 + BACOVA_04193 0.35 -1.3 70,116 + -1.3 70,116 + +0.3 70,116 + -2.1 70,131 - +0.1 70,199 - +0.7 70,210 - -0.7 70,214 - +0.1 70,293 - +0.9 70,293 - +1.2 70,317 - +0.1 70,321 + +0.6 70,326 + -0.4 70,327 - +0.1 70,329 - +0.1 70,341 + +0.5 70,341 + +0.6 70,406 + +0.9 70,455 - +1.8 70,511 + +0.3 70,517 + +1.1 70,517 + +0.9 70,517 + +1.5 70,517 + -0.5 70,521 - +0.7 70,521 - +0.6 70,523 - -0.4 70,523 - +0.7 70,565 + +0.9 70,579 + -1.3 70,579 + -0.7 70,604 + +0.6 70,605 - -0.9 70,605 - -0.4 70,606 + -0.3 70,606 + -0.3 70,688 - BACOVA_04194 0.11 +1.1 70,691 + BACOVA_04194 0.11 +0.5 70,692 - BACOVA_04194 0.11 -1.3 70,692 - BACOVA_04194 0.11 -1.8 70,733 + BACOVA_04194 0.13 -0.5 70,759 + BACOVA_04194 0.14 -1.3
Or see this region's nucleotide sequence