Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03514

Experiment: b-Glucan from Oat 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03513 and BACOVA_03514 are separated by 165 nucleotidesBACOVA_03514 and BACOVA_03515 are separated by 163 nucleotides BACOVA_03513: BACOVA_03513 - Ser/Thr phosphatase family protein, at 281,825 to 282,589 _03513 BACOVA_03514: BACOVA_03514 - alpha amylase, catalytic domain protein, at 282,755 to 285,031 _03514 BACOVA_03515: BACOVA_03515 - hypothetical protein, at 285,195 to 286,658 _03515 Position (kb) 282 283 284 285 286Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 281.759 kb on + strandat 281.791 kb on + strandat 282.587 kb on + strandat 282.588 kb on - strandat 282.620 kb on + strandat 282.620 kb on + strandat 282.621 kb on - strandat 282.658 kb on + strandat 282.722 kb on + strandat 282.722 kb on + strandat 282.756 kb on + strandat 282.845 kb on + strandat 282.845 kb on + strandat 282.846 kb on - strandat 282.857 kb on - strandat 282.857 kb on - strandat 282.868 kb on + strandat 282.871 kb on + strandat 282.874 kb on - strandat 283.038 kb on - strand, within BACOVA_03514at 283.051 kb on + strand, within BACOVA_03514at 283.051 kb on + strand, within BACOVA_03514at 283.052 kb on - strand, within BACOVA_03514at 283.066 kb on + strand, within BACOVA_03514at 283.132 kb on + strand, within BACOVA_03514at 283.133 kb on - strand, within BACOVA_03514at 283.133 kb on - strand, within BACOVA_03514at 283.184 kb on - strand, within BACOVA_03514at 283.208 kb on + strand, within BACOVA_03514at 283.209 kb on - strand, within BACOVA_03514at 283.270 kb on + strand, within BACOVA_03514at 283.271 kb on - strand, within BACOVA_03514at 283.304 kb on - strand, within BACOVA_03514at 283.306 kb on - strand, within BACOVA_03514at 283.358 kb on - strand, within BACOVA_03514at 283.389 kb on + strand, within BACOVA_03514at 283.402 kb on + strand, within BACOVA_03514at 283.402 kb on + strand, within BACOVA_03514at 283.402 kb on + strand, within BACOVA_03514at 283.403 kb on - strand, within BACOVA_03514at 283.463 kb on + strand, within BACOVA_03514at 283.509 kb on + strand, within BACOVA_03514at 283.510 kb on - strand, within BACOVA_03514at 283.513 kb on - strand, within BACOVA_03514at 283.627 kb on - strand, within BACOVA_03514at 283.627 kb on - strand, within BACOVA_03514at 283.631 kb on - strand, within BACOVA_03514at 283.631 kb on - strand, within BACOVA_03514at 283.634 kb on + strand, within BACOVA_03514at 283.635 kb on - strand, within BACOVA_03514at 283.635 kb on - strand, within BACOVA_03514at 283.785 kb on + strand, within BACOVA_03514at 283.786 kb on - strand, within BACOVA_03514at 283.804 kb on + strand, within BACOVA_03514at 283.816 kb on + strand, within BACOVA_03514at 283.816 kb on + strand, within BACOVA_03514at 283.824 kb on + strand, within BACOVA_03514at 283.825 kb on - strand, within BACOVA_03514at 283.829 kb on + strand, within BACOVA_03514at 283.829 kb on - strand, within BACOVA_03514at 283.873 kb on + strand, within BACOVA_03514at 283.883 kb on - strand, within BACOVA_03514at 283.885 kb on - strand, within BACOVA_03514at 283.902 kb on + strand, within BACOVA_03514at 283.902 kb on + strand, within BACOVA_03514at 283.923 kb on + strand, within BACOVA_03514at 283.955 kb on - strand, within BACOVA_03514at 283.970 kb on + strand, within BACOVA_03514at 283.971 kb on - strand, within BACOVA_03514at 283.995 kb on - strand, within BACOVA_03514at 284.009 kb on + strand, within BACOVA_03514at 284.013 kb on + strand, within BACOVA_03514at 284.014 kb on - strand, within BACOVA_03514at 284.056 kb on + strand, within BACOVA_03514at 284.079 kb on + strand, within BACOVA_03514at 284.079 kb on + strand, within BACOVA_03514at 284.162 kb on + strand, within BACOVA_03514at 284.166 kb on + strand, within BACOVA_03514at 284.166 kb on + strand, within BACOVA_03514at 284.167 kb on - strand, within BACOVA_03514at 284.244 kb on + strand, within BACOVA_03514at 284.244 kb on + strand, within BACOVA_03514at 284.244 kb on + strand, within BACOVA_03514at 284.244 kb on + strand, within BACOVA_03514at 284.244 kb on + strand, within BACOVA_03514at 284.245 kb on - strand, within BACOVA_03514at 284.245 kb on - strand, within BACOVA_03514at 284.245 kb on - strand, within BACOVA_03514at 284.268 kb on + strand, within BACOVA_03514at 284.278 kb on - strand, within BACOVA_03514at 284.359 kb on - strand, within BACOVA_03514at 284.439 kb on + strand, within BACOVA_03514at 284.439 kb on + strand, within BACOVA_03514at 284.440 kb on - strand, within BACOVA_03514at 284.444 kb on + strand, within BACOVA_03514at 284.444 kb on + strand, within BACOVA_03514at 284.473 kb on + strand, within BACOVA_03514at 284.473 kb on + strand, within BACOVA_03514at 284.551 kb on + strand, within BACOVA_03514at 284.561 kb on + strand, within BACOVA_03514at 284.571 kb on + strand, within BACOVA_03514at 284.606 kb on + strand, within BACOVA_03514at 284.606 kb on + strand, within BACOVA_03514at 284.607 kb on - strand, within BACOVA_03514at 284.627 kb on + strand, within BACOVA_03514at 284.636 kb on - strand, within BACOVA_03514at 284.652 kb on + strand, within BACOVA_03514at 284.665 kb on + strand, within BACOVA_03514at 284.665 kb on + strand, within BACOVA_03514at 284.683 kb on + strand, within BACOVA_03514at 284.684 kb on + strand, within BACOVA_03514at 284.743 kb on + strand, within BACOVA_03514at 284.743 kb on + strand, within BACOVA_03514at 284.744 kb on - strand, within BACOVA_03514at 284.780 kb on + strand, within BACOVA_03514at 284.882 kb on - strandat 285.032 kb on - strandat 285.032 kb on - strandat 285.039 kb on - strandat 285.062 kb on + strandat 285.063 kb on - strandat 285.071 kb on + strandat 285.073 kb on + strandat 285.074 kb on - strandat 285.106 kb on - strandat 285.106 kb on - strandat 285.153 kb on + strandat 285.207 kb on - strandat 285.228 kb on - strandat 285.253 kb on - strandat 285.257 kb on + strandat 285.258 kb on - strandat 285.299 kb on + strandat 285.300 kb on - strandat 285.320 kb on + strandat 285.350 kb on + strand, within BACOVA_03515at 285.381 kb on + strand, within BACOVA_03515at 285.382 kb on - strand, within BACOVA_03515at 285.399 kb on - strand, within BACOVA_03515at 285.561 kb on - strand, within BACOVA_03515at 285.576 kb on + strand, within BACOVA_03515at 285.583 kb on + strand, within BACOVA_03515at 285.584 kb on - strand, within BACOVA_03515at 285.584 kb on - strand, within BACOVA_03515at 285.608 kb on + strand, within BACOVA_03515at 285.627 kb on + strand, within BACOVA_03515at 285.658 kb on - strand, within BACOVA_03515at 285.661 kb on - strand, within BACOVA_03515at 285.732 kb on - strand, within BACOVA_03515at 285.734 kb on - strand, within BACOVA_03515at 285.736 kb on + strand, within BACOVA_03515at 285.742 kb on - strand, within BACOVA_03515at 285.742 kb on - strand, within BACOVA_03515at 285.792 kb on + strand, within BACOVA_03515at 285.818 kb on - strand, within BACOVA_03515at 285.835 kb on + strand, within BACOVA_03515at 285.835 kb on + strand, within BACOVA_03515at 285.835 kb on + strand, within BACOVA_03515at 285.835 kb on + strand, within BACOVA_03515at 285.836 kb on - strand, within BACOVA_03515at 285.836 kb on - strand, within BACOVA_03515at 285.836 kb on - strand, within BACOVA_03515at 285.850 kb on - strand, within BACOVA_03515at 285.869 kb on - strand, within BACOVA_03515at 285.869 kb on - strand, within BACOVA_03515at 285.872 kb on + strand, within BACOVA_03515at 285.872 kb on + strand, within BACOVA_03515at 285.874 kb on + strand, within BACOVA_03515at 285.875 kb on - strand, within BACOVA_03515at 285.882 kb on + strand, within BACOVA_03515at 285.883 kb on - strand, within BACOVA_03515

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Per-strain Table

Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/ml (C)
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281,759 + +0.2
281,791 + +0.5
282,587 + +0.1
282,588 - -2.4
282,620 + +1.2
282,620 + -1.0
282,621 - +0.4
282,658 + +0.6
282,722 + +1.4
282,722 + -0.4
282,756 + -0.5
282,845 + +0.4
282,845 + +0.0
282,846 - -1.1
282,857 - -0.5
282,857 - -1.4
282,868 + -1.1
282,871 + -1.4
282,874 - -0.3
283,038 - BACOVA_03514 0.12 -0.1
283,051 + BACOVA_03514 0.13 -1.5
283,051 + BACOVA_03514 0.13 -1.3
283,052 - BACOVA_03514 0.13 +0.1
283,066 + BACOVA_03514 0.14 +0.5
283,132 + BACOVA_03514 0.17 +0.1
283,133 - BACOVA_03514 0.17 -1.4
283,133 - BACOVA_03514 0.17 +0.6
283,184 - BACOVA_03514 0.19 +0.8
283,208 + BACOVA_03514 0.20 -0.8
283,209 - BACOVA_03514 0.20 -1.1
283,270 + BACOVA_03514 0.23 -3.0
283,271 - BACOVA_03514 0.23 +0.1
283,304 - BACOVA_03514 0.24 -0.9
283,306 - BACOVA_03514 0.24 -1.2
283,358 - BACOVA_03514 0.26 -0.6
283,389 + BACOVA_03514 0.28 -0.1
283,402 + BACOVA_03514 0.28 +0.2
283,402 + BACOVA_03514 0.28 -1.1
283,402 + BACOVA_03514 0.28 +1.6
283,403 - BACOVA_03514 0.28 +0.1
283,463 + BACOVA_03514 0.31 -1.5
283,509 + BACOVA_03514 0.33 +1.0
283,510 - BACOVA_03514 0.33 -0.0
283,513 - BACOVA_03514 0.33 +1.6
283,627 - BACOVA_03514 0.38 +0.4
283,627 - BACOVA_03514 0.38 -0.1
283,631 - BACOVA_03514 0.38 -1.7
283,631 - BACOVA_03514 0.38 -1.8
283,634 + BACOVA_03514 0.39 +0.3
283,635 - BACOVA_03514 0.39 -1.4
283,635 - BACOVA_03514 0.39 -1.7
283,785 + BACOVA_03514 0.45 -1.9
283,786 - BACOVA_03514 0.45 -1.4
283,804 + BACOVA_03514 0.46 +0.5
283,816 + BACOVA_03514 0.47 +0.2
283,816 + BACOVA_03514 0.47 -1.2
283,824 + BACOVA_03514 0.47 -0.6
283,825 - BACOVA_03514 0.47 -0.0
283,829 + BACOVA_03514 0.47 -0.6
283,829 - BACOVA_03514 0.47 -1.1
283,873 + BACOVA_03514 0.49 -0.6
283,883 - BACOVA_03514 0.50 -0.9
283,885 - BACOVA_03514 0.50 -1.2
283,902 + BACOVA_03514 0.50 -1.0
283,902 + BACOVA_03514 0.50 -0.4
283,923 + BACOVA_03514 0.51 +2.2
283,955 - BACOVA_03514 0.53 +0.3
283,970 + BACOVA_03514 0.53 +2.4
283,971 - BACOVA_03514 0.53 +1.2
283,995 - BACOVA_03514 0.54 +0.2
284,009 + BACOVA_03514 0.55 +0.2
284,013 + BACOVA_03514 0.55 -0.4
284,014 - BACOVA_03514 0.55 -0.3
284,056 + BACOVA_03514 0.57 -0.3
284,079 + BACOVA_03514 0.58 +0.1
284,079 + BACOVA_03514 0.58 +0.2
284,162 + BACOVA_03514 0.62 -0.1
284,166 + BACOVA_03514 0.62 +0.3
284,166 + BACOVA_03514 0.62 -1.4
284,167 - BACOVA_03514 0.62 -0.4
284,244 + BACOVA_03514 0.65 -0.9
284,244 + BACOVA_03514 0.65 -0.3
284,244 + BACOVA_03514 0.65 -0.5
284,244 + BACOVA_03514 0.65 -1.4
284,244 + BACOVA_03514 0.65 -0.5
284,245 - BACOVA_03514 0.65 -1.6
284,245 - BACOVA_03514 0.65 -3.4
284,245 - BACOVA_03514 0.65 -0.1
284,268 + BACOVA_03514 0.66 -0.9
284,278 - BACOVA_03514 0.67 +0.9
284,359 - BACOVA_03514 0.70 -1.3
284,439 + BACOVA_03514 0.74 -1.0
284,439 + BACOVA_03514 0.74 -0.2
284,440 - BACOVA_03514 0.74 -0.2
284,444 + BACOVA_03514 0.74 -0.6
284,444 + BACOVA_03514 0.74 -0.6
284,473 + BACOVA_03514 0.75 -0.1
284,473 + BACOVA_03514 0.75 -0.6
284,551 + BACOVA_03514 0.79 +0.2
284,561 + BACOVA_03514 0.79 -1.7
284,571 + BACOVA_03514 0.80 -0.3
284,606 + BACOVA_03514 0.81 -2.7
284,606 + BACOVA_03514 0.81 -0.3
284,607 - BACOVA_03514 0.81 -1.4
284,627 + BACOVA_03514 0.82 +0.3
284,636 - BACOVA_03514 0.83 -1.2
284,652 + BACOVA_03514 0.83 -0.1
284,665 + BACOVA_03514 0.84 +0.2
284,665 + BACOVA_03514 0.84 +0.3
284,683 + BACOVA_03514 0.85 +1.6
284,684 + BACOVA_03514 0.85 -2.4
284,743 + BACOVA_03514 0.87 +1.0
284,743 + BACOVA_03514 0.87 -0.7
284,744 - BACOVA_03514 0.87 -0.1
284,780 + BACOVA_03514 0.89 +0.3
284,882 - -1.5
285,032 - -0.3
285,032 - +0.6
285,039 - -1.1
285,062 + +1.2
285,063 - +1.2
285,071 + +0.1
285,073 + +0.0
285,074 - +0.6
285,106 - +0.2
285,106 - -1.1
285,153 + -0.8
285,207 - -0.4
285,228 - -0.6
285,253 - -0.6
285,257 + -0.2
285,258 - -0.0
285,299 + -0.4
285,300 - +0.4
285,320 + -0.1
285,350 + BACOVA_03515 0.11 -0.6
285,381 + BACOVA_03515 0.13 -0.8
285,382 - BACOVA_03515 0.13 +0.7
285,399 - BACOVA_03515 0.14 +0.7
285,561 - BACOVA_03515 0.25 -0.6
285,576 + BACOVA_03515 0.26 -0.9
285,583 + BACOVA_03515 0.27 -0.9
285,584 - BACOVA_03515 0.27 +2.6
285,584 - BACOVA_03515 0.27 +0.5
285,608 + BACOVA_03515 0.28 +0.0
285,627 + BACOVA_03515 0.30 +0.0
285,658 - BACOVA_03515 0.32 +0.3
285,661 - BACOVA_03515 0.32 +0.2
285,732 - BACOVA_03515 0.37 -0.9
285,734 - BACOVA_03515 0.37 +0.1
285,736 + BACOVA_03515 0.37 +0.9
285,742 - BACOVA_03515 0.37 -0.2
285,742 - BACOVA_03515 0.37 +0.7
285,792 + BACOVA_03515 0.41 -0.6
285,818 - BACOVA_03515 0.43 +0.5
285,835 + BACOVA_03515 0.44 -0.6
285,835 + BACOVA_03515 0.44 +0.2
285,835 + BACOVA_03515 0.44 -0.8
285,835 + BACOVA_03515 0.44 -0.1
285,836 - BACOVA_03515 0.44 +2.4
285,836 - BACOVA_03515 0.44 -0.0
285,836 - BACOVA_03515 0.44 -0.4
285,850 - BACOVA_03515 0.45 +1.2
285,869 - BACOVA_03515 0.46 -0.2
285,869 - BACOVA_03515 0.46 +1.1
285,872 + BACOVA_03515 0.46 +0.5
285,872 + BACOVA_03515 0.46 -1.2
285,874 + BACOVA_03515 0.46 -0.4
285,875 - BACOVA_03515 0.46 +1.6
285,882 + BACOVA_03515 0.47 -0.1
285,883 - BACOVA_03515 0.47 +0.0

Or see this region's nucleotide sequence