Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02802

Experiment: b-Glucan from Oat 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_02801 and BACOVA_02802 are separated by 29 nucleotidesBACOVA_02802 and BACOVA_02803 overlap by 11 nucleotides BACOVA_02801: BACOVA_02801 - hypothetical protein, at 262,108 to 263,010 _02801 BACOVA_02802: BACOVA_02802 - SusD family protein, at 263,040 to 264,872 _02802 BACOVA_02803: BACOVA_02803 - TonB-linked outer membrane protein, SusC/RagA family, at 264,862 to 267,945 _02803 Position (kb) 263 264 265Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 262.041 kb on + strandat 262.041 kb on + strandat 262.062 kb on + strandat 262.063 kb on - strandat 262.079 kb on + strandat 262.087 kb on + strandat 262.090 kb on - strandat 262.100 kb on + strandat 262.104 kb on + strandat 262.105 kb on - strandat 262.176 kb on - strandat 262.200 kb on + strand, within BACOVA_02801at 262.201 kb on - strand, within BACOVA_02801at 262.202 kb on + strand, within BACOVA_02801at 262.203 kb on - strand, within BACOVA_02801at 262.203 kb on - strand, within BACOVA_02801at 262.203 kb on - strand, within BACOVA_02801at 262.262 kb on - strand, within BACOVA_02801at 262.308 kb on + strand, within BACOVA_02801at 262.387 kb on + strand, within BACOVA_02801at 262.398 kb on + strand, within BACOVA_02801at 262.425 kb on + strand, within BACOVA_02801at 262.446 kb on + strand, within BACOVA_02801at 262.451 kb on + strand, within BACOVA_02801at 262.502 kb on + strand, within BACOVA_02801at 262.507 kb on - strand, within BACOVA_02801at 262.507 kb on - strand, within BACOVA_02801at 262.514 kb on + strand, within BACOVA_02801at 262.537 kb on + strand, within BACOVA_02801at 262.538 kb on - strand, within BACOVA_02801at 262.538 kb on - strand, within BACOVA_02801at 262.543 kb on - strand, within BACOVA_02801at 262.543 kb on - strand, within BACOVA_02801at 262.547 kb on + strand, within BACOVA_02801at 262.547 kb on + strand, within BACOVA_02801at 262.547 kb on + strand, within BACOVA_02801at 262.547 kb on + strand, within BACOVA_02801at 262.575 kb on + strand, within BACOVA_02801at 262.576 kb on - strand, within BACOVA_02801at 262.576 kb on - strand, within BACOVA_02801at 262.580 kb on - strand, within BACOVA_02801at 262.580 kb on - strand, within BACOVA_02801at 262.580 kb on - strand, within BACOVA_02801at 262.580 kb on - strand, within BACOVA_02801at 262.580 kb on - strand, within BACOVA_02801at 262.622 kb on + strand, within BACOVA_02801at 262.622 kb on + strand, within BACOVA_02801at 262.653 kb on - strand, within BACOVA_02801at 262.708 kb on - strand, within BACOVA_02801at 262.720 kb on - strand, within BACOVA_02801at 262.742 kb on + strand, within BACOVA_02801at 262.743 kb on - strand, within BACOVA_02801at 262.818 kb on + strand, within BACOVA_02801at 262.866 kb on + strand, within BACOVA_02801at 262.866 kb on + strand, within BACOVA_02801at 262.867 kb on - strand, within BACOVA_02801at 262.867 kb on - strand, within BACOVA_02801at 262.867 kb on - strand, within BACOVA_02801at 262.914 kb on - strand, within BACOVA_02801at 262.926 kb on + strandat 262.931 kb on + strandat 262.993 kb on + strandat 262.999 kb on + strandat 263.073 kb on - strandat 263.092 kb on + strandat 263.111 kb on - strandat 263.165 kb on + strandat 263.166 kb on - strandat 263.220 kb on + strandat 263.220 kb on + strandat 263.221 kb on - strandat 263.221 kb on - strandat 263.262 kb on - strand, within BACOVA_02802at 263.332 kb on + strand, within BACOVA_02802at 263.464 kb on - strand, within BACOVA_02802at 263.494 kb on + strand, within BACOVA_02802at 263.495 kb on - strand, within BACOVA_02802at 263.508 kb on + strand, within BACOVA_02802at 263.563 kb on + strand, within BACOVA_02802at 263.563 kb on + strand, within BACOVA_02802at 263.563 kb on + strand, within BACOVA_02802at 263.564 kb on - strand, within BACOVA_02802at 263.564 kb on - strand, within BACOVA_02802at 263.574 kb on - strand, within BACOVA_02802at 263.574 kb on - strand, within BACOVA_02802at 263.624 kb on + strand, within BACOVA_02802at 263.625 kb on - strand, within BACOVA_02802at 263.654 kb on + strand, within BACOVA_02802at 263.655 kb on - strand, within BACOVA_02802at 263.660 kb on + strand, within BACOVA_02802at 263.660 kb on + strand, within BACOVA_02802at 263.661 kb on - strand, within BACOVA_02802at 263.665 kb on + strand, within BACOVA_02802at 263.665 kb on + strand, within BACOVA_02802at 263.665 kb on + strand, within BACOVA_02802at 263.797 kb on - strand, within BACOVA_02802at 263.797 kb on - strand, within BACOVA_02802at 263.837 kb on - strand, within BACOVA_02802at 263.837 kb on - strand, within BACOVA_02802at 263.837 kb on - strand, within BACOVA_02802at 263.870 kb on + strand, within BACOVA_02802at 263.874 kb on - strand, within BACOVA_02802at 263.896 kb on + strand, within BACOVA_02802at 263.950 kb on + strand, within BACOVA_02802at 263.950 kb on + strand, within BACOVA_02802at 263.951 kb on - strand, within BACOVA_02802at 264.101 kb on + strand, within BACOVA_02802at 264.105 kb on + strand, within BACOVA_02802at 264.165 kb on - strand, within BACOVA_02802at 264.165 kb on - strand, within BACOVA_02802at 264.167 kb on + strand, within BACOVA_02802at 264.193 kb on + strand, within BACOVA_02802at 264.194 kb on - strand, within BACOVA_02802at 264.194 kb on - strand, within BACOVA_02802at 264.221 kb on + strand, within BACOVA_02802at 264.263 kb on + strand, within BACOVA_02802at 264.263 kb on + strand, within BACOVA_02802at 264.263 kb on + strand, within BACOVA_02802at 264.263 kb on + strand, within BACOVA_02802at 264.308 kb on + strand, within BACOVA_02802at 264.330 kb on - strand, within BACOVA_02802at 264.364 kb on + strand, within BACOVA_02802at 264.406 kb on + strand, within BACOVA_02802at 264.406 kb on + strand, within BACOVA_02802at 264.406 kb on + strand, within BACOVA_02802at 264.508 kb on - strand, within BACOVA_02802at 264.508 kb on - strand, within BACOVA_02802at 264.508 kb on - strand, within BACOVA_02802at 264.511 kb on + strand, within BACOVA_02802at 264.511 kb on + strand, within BACOVA_02802at 264.511 kb on + strand, within BACOVA_02802at 264.526 kb on + strand, within BACOVA_02802at 264.579 kb on - strand, within BACOVA_02802at 264.579 kb on - strand, within BACOVA_02802at 264.579 kb on - strand, within BACOVA_02802at 264.579 kb on - strand, within BACOVA_02802at 264.587 kb on + strand, within BACOVA_02802at 264.588 kb on - strand, within BACOVA_02802at 264.590 kb on - strand, within BACOVA_02802at 264.590 kb on - strand, within BACOVA_02802at 264.647 kb on + strand, within BACOVA_02802at 264.648 kb on - strand, within BACOVA_02802at 264.684 kb on - strand, within BACOVA_02802at 264.692 kb on + strandat 264.693 kb on - strandat 264.694 kb on + strandat 264.695 kb on - strandat 264.695 kb on - strandat 264.696 kb on + strandat 264.697 kb on - strandat 264.697 kb on - strandat 264.697 kb on - strandat 264.697 kb on - strandat 264.699 kb on + strandat 264.767 kb on - strandat 264.807 kb on + strandat 264.808 kb on - strandat 264.822 kb on + strandat 264.823 kb on - strandat 264.823 kb on - strandat 264.824 kb on + strandat 264.825 kb on + strandat 264.825 kb on + strandat 264.827 kb on + strandat 264.828 kb on - strandat 264.889 kb on - strandat 264.970 kb on + strandat 265.041 kb on - strandat 265.077 kb on + strandat 265.180 kb on + strand, within BACOVA_02803at 265.181 kb on - strand, within BACOVA_02803at 265.181 kb on - strand, within BACOVA_02803at 265.197 kb on - strand, within BACOVA_02803at 265.197 kb on - strand, within BACOVA_02803at 265.200 kb on + strand, within BACOVA_02803at 265.200 kb on + strand, within BACOVA_02803at 265.223 kb on + strand, within BACOVA_02803at 265.224 kb on - strand, within BACOVA_02803at 265.224 kb on - strand, within BACOVA_02803at 265.275 kb on - strand, within BACOVA_02803at 265.292 kb on + strand, within BACOVA_02803at 265.320 kb on + strand, within BACOVA_02803at 265.321 kb on - strand, within BACOVA_02803at 265.352 kb on - strand, within BACOVA_02803at 265.468 kb on + strand, within BACOVA_02803at 265.494 kb on + strand, within BACOVA_02803at 265.495 kb on - strand, within BACOVA_02803at 265.495 kb on - strand, within BACOVA_02803at 265.526 kb on + strand, within BACOVA_02803at 265.562 kb on - strand, within BACOVA_02803at 265.601 kb on + strand, within BACOVA_02803at 265.601 kb on + strand, within BACOVA_02803at 265.602 kb on - strand, within BACOVA_02803at 265.645 kb on + strand, within BACOVA_02803at 265.646 kb on - strand, within BACOVA_02803at 265.686 kb on + strand, within BACOVA_02803at 265.693 kb on - strand, within BACOVA_02803at 265.698 kb on + strand, within BACOVA_02803at 265.699 kb on - strand, within BACOVA_02803at 265.699 kb on - strand, within BACOVA_02803at 265.740 kb on + strand, within BACOVA_02803at 265.741 kb on - strand, within BACOVA_02803at 265.773 kb on - strand, within BACOVA_02803

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Per-strain Table

Position Strand Gene LocusTag Fraction b-Glucan from Oat 2.5 mg/ml (C)
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262,041 + +0.6
262,041 + +1.6
262,062 + -0.2
262,063 - +1.6
262,079 + -1.8
262,087 + -0.0
262,090 - +1.1
262,100 + -0.1
262,104 + -0.9
262,105 - -2.2
262,176 - -0.5
262,200 + BACOVA_02801 0.10 -0.2
262,201 - BACOVA_02801 0.10 -2.2
262,202 + BACOVA_02801 0.10 +0.8
262,203 - BACOVA_02801 0.11 +0.1
262,203 - BACOVA_02801 0.11 -0.2
262,203 - BACOVA_02801 0.11 -0.3
262,262 - BACOVA_02801 0.17 -1.2
262,308 + BACOVA_02801 0.22 -0.6
262,387 + BACOVA_02801 0.31 -1.6
262,398 + BACOVA_02801 0.32 -1.6
262,425 + BACOVA_02801 0.35 -0.4
262,446 + BACOVA_02801 0.37 +0.4
262,451 + BACOVA_02801 0.38 -0.7
262,502 + BACOVA_02801 0.44 +1.2
262,507 - BACOVA_02801 0.44 -0.1
262,507 - BACOVA_02801 0.44 -0.4
262,514 + BACOVA_02801 0.45 +3.0
262,537 + BACOVA_02801 0.48 +0.3
262,538 - BACOVA_02801 0.48 -0.2
262,538 - BACOVA_02801 0.48 -1.2
262,543 - BACOVA_02801 0.48 -1.4
262,543 - BACOVA_02801 0.48 -2.1
262,547 + BACOVA_02801 0.49 +1.4
262,547 + BACOVA_02801 0.49 +1.7
262,547 + BACOVA_02801 0.49 -1.2
262,547 + BACOVA_02801 0.49 -0.4
262,575 + BACOVA_02801 0.52 -0.8
262,576 - BACOVA_02801 0.52 -1.4
262,576 - BACOVA_02801 0.52 -1.0
262,580 - BACOVA_02801 0.52 -0.6
262,580 - BACOVA_02801 0.52 -0.1
262,580 - BACOVA_02801 0.52 -1.7
262,580 - BACOVA_02801 0.52 +0.3
262,580 - BACOVA_02801 0.52 -0.5
262,622 + BACOVA_02801 0.57 +0.6
262,622 + BACOVA_02801 0.57 -0.5
262,653 - BACOVA_02801 0.60 -1.6
262,708 - BACOVA_02801 0.66 +0.6
262,720 - BACOVA_02801 0.68 -0.4
262,742 + BACOVA_02801 0.70 +0.8
262,743 - BACOVA_02801 0.70 -1.2
262,818 + BACOVA_02801 0.79 +1.2
262,866 + BACOVA_02801 0.84 -0.2
262,866 + BACOVA_02801 0.84 -1.1
262,867 - BACOVA_02801 0.84 +0.3
262,867 - BACOVA_02801 0.84 +0.8
262,867 - BACOVA_02801 0.84 -1.3
262,914 - BACOVA_02801 0.89 -3.4
262,926 + +0.1
262,931 + +1.0
262,993 + -0.8
262,999 + +0.2
263,073 - -0.9
263,092 + -1.3
263,111 - +0.1
263,165 + -0.3
263,166 - -2.5
263,220 + +1.8
263,220 + +0.4
263,221 - -1.4
263,221 - -0.1
263,262 - BACOVA_02802 0.12 -1.2
263,332 + BACOVA_02802 0.16 -1.6
263,464 - BACOVA_02802 0.23 -2.2
263,494 + BACOVA_02802 0.25 +0.2
263,495 - BACOVA_02802 0.25 +0.3
263,508 + BACOVA_02802 0.26 +0.6
263,563 + BACOVA_02802 0.29 +0.3
263,563 + BACOVA_02802 0.29 +1.4
263,563 + BACOVA_02802 0.29 +0.5
263,564 - BACOVA_02802 0.29 -1.2
263,564 - BACOVA_02802 0.29 +0.5
263,574 - BACOVA_02802 0.29 -0.4
263,574 - BACOVA_02802 0.29 -0.8
263,624 + BACOVA_02802 0.32 -0.0
263,625 - BACOVA_02802 0.32 -1.0
263,654 + BACOVA_02802 0.33 -0.8
263,655 - BACOVA_02802 0.34 -0.8
263,660 + BACOVA_02802 0.34 -0.2
263,660 + BACOVA_02802 0.34 -0.2
263,661 - BACOVA_02802 0.34 -0.3
263,665 + BACOVA_02802 0.34 -0.6
263,665 + BACOVA_02802 0.34 +1.2
263,665 + BACOVA_02802 0.34 -1.2
263,797 - BACOVA_02802 0.41 -1.4
263,797 - BACOVA_02802 0.41 -0.8
263,837 - BACOVA_02802 0.43 +1.1
263,837 - BACOVA_02802 0.43 +0.2
263,837 - BACOVA_02802 0.43 -0.8
263,870 + BACOVA_02802 0.45 -0.3
263,874 - BACOVA_02802 0.45 -0.6
263,896 + BACOVA_02802 0.47 +1.4
263,950 + BACOVA_02802 0.50 -0.9
263,950 + BACOVA_02802 0.50 +0.0
263,951 - BACOVA_02802 0.50 +1.4
264,101 + BACOVA_02802 0.58 -0.8
264,105 + BACOVA_02802 0.58 +0.2
264,165 - BACOVA_02802 0.61 +0.4
264,165 - BACOVA_02802 0.61 +0.8
264,167 + BACOVA_02802 0.61 +0.4
264,193 + BACOVA_02802 0.63 -0.7
264,194 - BACOVA_02802 0.63 -0.4
264,194 - BACOVA_02802 0.63 +0.2
264,221 + BACOVA_02802 0.64 +4.1
264,263 + BACOVA_02802 0.67 +1.6
264,263 + BACOVA_02802 0.67 +0.5
264,263 + BACOVA_02802 0.67 -0.4
264,263 + BACOVA_02802 0.67 -0.8
264,308 + BACOVA_02802 0.69 +0.3
264,330 - BACOVA_02802 0.70 +0.6
264,364 + BACOVA_02802 0.72 +0.5
264,406 + BACOVA_02802 0.75 +0.4
264,406 + BACOVA_02802 0.75 -1.1
264,406 + BACOVA_02802 0.75 -0.4
264,508 - BACOVA_02802 0.80 -1.5
264,508 - BACOVA_02802 0.80 +0.6
264,508 - BACOVA_02802 0.80 -1.2
264,511 + BACOVA_02802 0.80 +0.7
264,511 + BACOVA_02802 0.80 +0.6
264,511 + BACOVA_02802 0.80 +0.7
264,526 + BACOVA_02802 0.81 -1.8
264,579 - BACOVA_02802 0.84 +1.2
264,579 - BACOVA_02802 0.84 +1.2
264,579 - BACOVA_02802 0.84 +0.7
264,579 - BACOVA_02802 0.84 -0.7
264,587 + BACOVA_02802 0.84 +0.0
264,588 - BACOVA_02802 0.84 +0.8
264,590 - BACOVA_02802 0.85 -0.4
264,590 - BACOVA_02802 0.85 +3.0
264,647 + BACOVA_02802 0.88 +1.2
264,648 - BACOVA_02802 0.88 +0.5
264,684 - BACOVA_02802 0.90 -0.8
264,692 + -1.2
264,693 - -0.1
264,694 + +1.4
264,695 - -0.1
264,695 - +0.0
264,696 + -0.8
264,697 - -0.5
264,697 - +1.3
264,697 - +0.8
264,697 - +2.0
264,699 + +0.6
264,767 - -1.0
264,807 + -1.3
264,808 - +0.6
264,822 + -1.6
264,823 - +0.2
264,823 - -1.0
264,824 + -0.2
264,825 + +0.6
264,825 + +0.0
264,827 + -0.3
264,828 - -1.1
264,889 - -0.3
264,970 + +0.7
265,041 - +0.2
265,077 + +0.7
265,180 + BACOVA_02803 0.10 +2.5
265,181 - BACOVA_02803 0.10 -0.7
265,181 - BACOVA_02803 0.10 -0.4
265,197 - BACOVA_02803 0.11 -0.3
265,197 - BACOVA_02803 0.11 -0.4
265,200 + BACOVA_02803 0.11 +0.8
265,200 + BACOVA_02803 0.11 +0.4
265,223 + BACOVA_02803 0.12 -0.1
265,224 - BACOVA_02803 0.12 -1.4
265,224 - BACOVA_02803 0.12 -1.9
265,275 - BACOVA_02803 0.13 -0.4
265,292 + BACOVA_02803 0.14 +0.4
265,320 + BACOVA_02803 0.15 -0.8
265,321 - BACOVA_02803 0.15 -2.2
265,352 - BACOVA_02803 0.16 +0.4
265,468 + BACOVA_02803 0.20 +1.2
265,494 + BACOVA_02803 0.20 -0.2
265,495 - BACOVA_02803 0.21 -1.2
265,495 - BACOVA_02803 0.21 -0.2
265,526 + BACOVA_02803 0.22 -0.1
265,562 - BACOVA_02803 0.23 +0.2
265,601 + BACOVA_02803 0.24 -0.8
265,601 + BACOVA_02803 0.24 -1.0
265,602 - BACOVA_02803 0.24 +1.9
265,645 + BACOVA_02803 0.25 +2.1
265,646 - BACOVA_02803 0.25 -1.2
265,686 + BACOVA_02803 0.27 -0.2
265,693 - BACOVA_02803 0.27 -1.6
265,698 + BACOVA_02803 0.27 +1.0
265,699 - BACOVA_02803 0.27 -1.6
265,699 - BACOVA_02803 0.27 -0.3
265,740 + BACOVA_02803 0.28 +0.7
265,741 - BACOVA_02803 0.29 -0.8
265,773 - BACOVA_02803 0.30 -1.3

Or see this region's nucleotide sequence