Experiment: a-Cyclodextrin 2.5 mg/ml (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BACOVA_04726 and BACOVA_04727 are separated by 24 nucleotides BACOVA_04727 and BACOVA_04728 are separated by 14 nucleotides BACOVA_04728 and BACOVA_04729 are separated by 14 nucleotides BACOVA_04729 and BACOVA_04730 overlap by 20 nucleotides
BACOVA_04726: BACOVA_04726 - peptidase, M23 family, at 90,119 to 90,949
_04726
BACOVA_04727: BACOVA_04727 - hypothetical protein, at 90,974 to 91,639
_04727
BACOVA_04728: BACOVA_04728 - hypothetical protein, at 91,654 to 92,337
_04728
BACOVA_04729: BACOVA_04729 - hypothetical protein, at 92,352 to 93,041
_04729
BACOVA_04730: BACOVA_04730 - hypothetical protein, at 93,022 to 93,519
_04730
Position (kb) 91
92
93 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 90.678 kb on + strand, within BACOVA_04726 at 90.678 kb on + strand, within BACOVA_04726 at 90.691 kb on - strand, within BACOVA_04726 at 90.780 kb on + strand, within BACOVA_04726 at 90.780 kb on + strand, within BACOVA_04726 at 90.901 kb on + strand at 90.940 kb on + strand at 90.942 kb on + strand at 90.975 kb on + strand at 91.033 kb on + strand at 91.231 kb on + strand, within BACOVA_04727 at 91.612 kb on - strand at 91.639 kb on + strand at 91.708 kb on + strand at 91.708 kb on + strand at 91.778 kb on + strand, within BACOVA_04728 at 91.846 kb on + strand, within BACOVA_04728 at 92.031 kb on + strand, within BACOVA_04728 at 92.067 kb on - strand, within BACOVA_04728 at 92.068 kb on + strand, within BACOVA_04728 at 92.089 kb on + strand, within BACOVA_04728 at 92.111 kb on + strand, within BACOVA_04728 at 92.237 kb on + strand, within BACOVA_04728 at 92.309 kb on - strand at 92.317 kb on + strand at 92.354 kb on - strand at 92.467 kb on + strand, within BACOVA_04729 at 92.467 kb on + strand, within BACOVA_04729 at 92.468 kb on - strand, within BACOVA_04729 at 92.470 kb on + strand, within BACOVA_04729 at 92.471 kb on - strand, within BACOVA_04729 at 92.475 kb on + strand, within BACOVA_04729 at 92.497 kb on - strand, within BACOVA_04729 at 92.571 kb on - strand, within BACOVA_04729 at 92.647 kb on + strand, within BACOVA_04729 at 92.664 kb on + strand, within BACOVA_04729 at 92.749 kb on + strand, within BACOVA_04729 at 92.811 kb on - strand, within BACOVA_04729 at 92.812 kb on + strand, within BACOVA_04729 at 92.904 kb on + strand, within BACOVA_04729 at 92.904 kb on + strand, within BACOVA_04729 at 93.024 kb on - strand at 93.041 kb on + strand at 93.041 kb on + strand at 93.042 kb on - strand at 93.042 kb on - strand at 93.043 kb on + strand at 93.114 kb on + strand, within BACOVA_04730 at 93.228 kb on - strand, within BACOVA_04730 at 93.228 kb on - strand, within BACOVA_04730 at 93.228 kb on - strand, within BACOVA_04730 at 93.240 kb on - strand, within BACOVA_04730 at 93.240 kb on - strand, within BACOVA_04730 at 93.240 kb on - strand, within BACOVA_04730 at 93.277 kb on - strand, within BACOVA_04730 at 93.299 kb on + strand, within BACOVA_04730 at 93.299 kb on + strand, within BACOVA_04730 at 93.317 kb on + strand, within BACOVA_04730
Per-strain Table
Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/ml (C) remove 90,678 + BACOVA_04726 0.67 -1.2 90,678 + BACOVA_04726 0.67 -0.4 90,691 - BACOVA_04726 0.69 +1.8 90,780 + BACOVA_04726 0.80 +0.0 90,780 + BACOVA_04726 0.80 +0.0 90,901 + -0.9 90,940 + -1.3 90,942 + +0.8 90,975 + -0.7 91,033 + +1.5 91,231 + BACOVA_04727 0.39 -1.0 91,612 - -1.2 91,639 + +0.5 91,708 + -0.5 91,708 + +0.3 91,778 + BACOVA_04728 0.18 -2.1 91,846 + BACOVA_04728 0.28 +0.7 92,031 + BACOVA_04728 0.55 -1.9 92,067 - BACOVA_04728 0.60 -0.5 92,068 + BACOVA_04728 0.61 -1.2 92,089 + BACOVA_04728 0.64 -0.5 92,111 + BACOVA_04728 0.67 +0.2 92,237 + BACOVA_04728 0.85 -0.9 92,309 - +0.8 92,317 + +3.0 92,354 - -0.9 92,467 + BACOVA_04729 0.17 -1.4 92,467 + BACOVA_04729 0.17 +1.4 92,468 - BACOVA_04729 0.17 -1.2 92,470 + BACOVA_04729 0.17 +0.8 92,471 - BACOVA_04729 0.17 -0.2 92,475 + BACOVA_04729 0.18 -0.4 92,497 - BACOVA_04729 0.21 -2.5 92,571 - BACOVA_04729 0.32 -1.6 92,647 + BACOVA_04729 0.43 -0.6 92,664 + BACOVA_04729 0.45 -1.3 92,749 + BACOVA_04729 0.58 -0.8 92,811 - BACOVA_04729 0.67 +0.2 92,812 + BACOVA_04729 0.67 -0.6 92,904 + BACOVA_04729 0.80 -1.6 92,904 + BACOVA_04729 0.80 -0.7 93,024 - +1.4 93,041 + +2.1 93,041 + +0.1 93,042 - -0.7 93,042 - +0.8 93,043 + +0.2 93,114 + BACOVA_04730 0.18 -0.8 93,228 - BACOVA_04730 0.41 -1.6 93,228 - BACOVA_04730 0.41 -0.2 93,228 - BACOVA_04730 0.41 -1.4 93,240 - BACOVA_04730 0.44 -0.9 93,240 - BACOVA_04730 0.44 +0.7 93,240 - BACOVA_04730 0.44 +1.8 93,277 - BACOVA_04730 0.51 +0.4 93,299 + BACOVA_04730 0.56 +0.5 93,299 + BACOVA_04730 0.56 -0.3 93,317 + BACOVA_04730 0.59 +0.7
Or see this region's nucleotide sequence