Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03637

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03636 and BACOVA_03637 are separated by 119 nucleotidesBACOVA_03637 and BACOVA_03638 are separated by 274 nucleotides BACOVA_03636: BACOVA_03636 - hypothetical protein, at 453,042 to 454,586 _03636 BACOVA_03637: BACOVA_03637 - hypothetical protein, at 454,706 to 454,972 _03637 BACOVA_03638: BACOVA_03638 - arylsulfatase, at 455,247 to 456,803 _03638 Position (kb) 454 455Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 453.728 kb on - strand, within BACOVA_03636at 453.731 kb on + strand, within BACOVA_03636at 453.823 kb on + strand, within BACOVA_03636at 453.824 kb on - strand, within BACOVA_03636at 453.836 kb on + strand, within BACOVA_03636at 453.854 kb on + strand, within BACOVA_03636at 453.855 kb on - strand, within BACOVA_03636at 453.855 kb on - strand, within BACOVA_03636at 453.855 kb on - strand, within BACOVA_03636at 453.855 kb on - strand, within BACOVA_03636at 453.868 kb on + strand, within BACOVA_03636at 453.869 kb on - strand, within BACOVA_03636at 453.911 kb on + strand, within BACOVA_03636at 453.912 kb on - strand, within BACOVA_03636at 453.941 kb on + strand, within BACOVA_03636at 453.965 kb on - strand, within BACOVA_03636at 453.968 kb on + strand, within BACOVA_03636at 454.061 kb on + strand, within BACOVA_03636at 454.118 kb on + strand, within BACOVA_03636at 454.139 kb on + strand, within BACOVA_03636at 454.140 kb on - strand, within BACOVA_03636at 454.140 kb on - strand, within BACOVA_03636at 454.147 kb on + strand, within BACOVA_03636at 454.148 kb on - strand, within BACOVA_03636at 454.157 kb on + strand, within BACOVA_03636at 454.158 kb on - strand, within BACOVA_03636at 454.191 kb on - strand, within BACOVA_03636at 454.194 kb on - strand, within BACOVA_03636at 454.221 kb on + strand, within BACOVA_03636at 454.225 kb on + strand, within BACOVA_03636at 454.354 kb on - strand, within BACOVA_03636at 454.361 kb on + strand, within BACOVA_03636at 454.362 kb on - strand, within BACOVA_03636at 454.427 kb on + strand, within BACOVA_03636at 454.427 kb on + strand, within BACOVA_03636at 454.441 kb on + strandat 454.441 kb on + strandat 454.445 kb on + strandat 454.472 kb on + strandat 454.572 kb on - strandat 454.577 kb on + strandat 454.584 kb on + strandat 454.584 kb on + strandat 454.599 kb on - strandat 454.636 kb on + strandat 454.637 kb on - strandat 454.654 kb on + strandat 454.655 kb on - strandat 454.664 kb on - strandat 454.664 kb on - strandat 454.666 kb on + strandat 454.681 kb on + strandat 454.681 kb on + strandat 454.708 kb on - strandat 454.745 kb on - strand, within BACOVA_03637at 454.820 kb on - strand, within BACOVA_03637at 454.824 kb on - strand, within BACOVA_03637at 454.835 kb on + strand, within BACOVA_03637at 454.910 kb on + strand, within BACOVA_03637at 454.911 kb on - strand, within BACOVA_03637at 454.939 kb on + strand, within BACOVA_03637at 454.953 kb on - strandat 454.955 kb on + strandat 454.961 kb on + strandat 454.993 kb on - strandat 454.993 kb on - strandat 454.995 kb on + strandat 454.995 kb on + strandat 454.995 kb on + strandat 455.001 kb on + strandat 455.002 kb on - strandat 455.002 kb on - strandat 455.029 kb on - strandat 455.099 kb on - strandat 455.104 kb on - strandat 455.146 kb on - strandat 455.204 kb on - strandat 455.244 kb on + strandat 455.245 kb on - strandat 455.245 kb on - strandat 455.248 kb on + strandat 455.252 kb on + strandat 455.279 kb on + strandat 455.280 kb on - strandat 455.280 kb on - strandat 455.397 kb on + strandat 455.398 kb on - strandat 455.398 kb on - strandat 455.399 kb on + strandat 455.419 kb on - strand, within BACOVA_03638at 455.484 kb on - strand, within BACOVA_03638at 455.675 kb on - strand, within BACOVA_03638at 455.675 kb on - strand, within BACOVA_03638at 455.675 kb on - strand, within BACOVA_03638at 455.768 kb on + strand, within BACOVA_03638at 455.773 kb on - strand, within BACOVA_03638at 455.789 kb on + strand, within BACOVA_03638at 455.858 kb on + strand, within BACOVA_03638at 455.859 kb on - strand, within BACOVA_03638at 455.941 kb on + strand, within BACOVA_03638at 455.942 kb on - strand, within BACOVA_03638

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Cyclodextrin 2.5 mg/ml (C)
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453,728 - BACOVA_03636 0.44 -0.4
453,731 + BACOVA_03636 0.45 +0.3
453,823 + BACOVA_03636 0.51 -2.5
453,824 - BACOVA_03636 0.51 -0.2
453,836 + BACOVA_03636 0.51 -2.0
453,854 + BACOVA_03636 0.53 -1.7
453,855 - BACOVA_03636 0.53 +0.5
453,855 - BACOVA_03636 0.53 +2.6
453,855 - BACOVA_03636 0.53 -0.6
453,855 - BACOVA_03636 0.53 -0.6
453,868 + BACOVA_03636 0.53 -1.8
453,869 - BACOVA_03636 0.54 -0.4
453,911 + BACOVA_03636 0.56 -1.1
453,912 - BACOVA_03636 0.56 -1.8
453,941 + BACOVA_03636 0.58 -1.0
453,965 - BACOVA_03636 0.60 +0.5
453,968 + BACOVA_03636 0.60 -0.1
454,061 + BACOVA_03636 0.66 +1.5
454,118 + BACOVA_03636 0.70 +2.4
454,139 + BACOVA_03636 0.71 -0.7
454,140 - BACOVA_03636 0.71 +1.0
454,140 - BACOVA_03636 0.71 -0.5
454,147 + BACOVA_03636 0.72 -2.5
454,148 - BACOVA_03636 0.72 +0.3
454,157 + BACOVA_03636 0.72 -1.9
454,158 - BACOVA_03636 0.72 -0.5
454,191 - BACOVA_03636 0.74 -0.6
454,194 - BACOVA_03636 0.75 -0.7
454,221 + BACOVA_03636 0.76 -0.7
454,225 + BACOVA_03636 0.77 -0.7
454,354 - BACOVA_03636 0.85 -3.0
454,361 + BACOVA_03636 0.85 -2.2
454,362 - BACOVA_03636 0.85 -0.2
454,427 + BACOVA_03636 0.90 -0.8
454,427 + BACOVA_03636 0.90 -1.1
454,441 + +0.1
454,441 + -0.5
454,445 + -0.2
454,472 + -0.7
454,572 - +0.2
454,577 + +1.1
454,584 + +0.0
454,584 + -0.5
454,599 - -0.9
454,636 + -1.1
454,637 - +0.0
454,654 + -0.3
454,655 - -0.1
454,664 - +3.0
454,664 - -0.1
454,666 + -1.3
454,681 + +2.9
454,681 + +0.4
454,708 - -1.3
454,745 - BACOVA_03637 0.15 +1.6
454,820 - BACOVA_03637 0.43 +0.8
454,824 - BACOVA_03637 0.44 -0.6
454,835 + BACOVA_03637 0.48 +1.5
454,910 + BACOVA_03637 0.76 +0.2
454,911 - BACOVA_03637 0.77 -0.2
454,939 + BACOVA_03637 0.87 -1.5
454,953 - -0.9
454,955 + -0.0
454,961 + +0.7
454,993 - -1.2
454,993 - +1.6
454,995 + +2.4
454,995 + +0.5
454,995 + +1.5
455,001 + +0.9
455,002 - -1.3
455,002 - +0.9
455,029 - +0.5
455,099 - -0.1
455,104 - -0.7
455,146 - -0.2
455,204 - +1.0
455,244 + -0.4
455,245 - -1.8
455,245 - -0.6
455,248 + -0.5
455,252 + +2.1
455,279 + -2.2
455,280 - +1.9
455,280 - -0.2
455,397 + -0.1
455,398 - +0.3
455,398 - -0.3
455,399 + -1.6
455,419 - BACOVA_03638 0.11 +0.3
455,484 - BACOVA_03638 0.15 +0.2
455,675 - BACOVA_03638 0.27 -0.1
455,675 - BACOVA_03638 0.27 -1.4
455,675 - BACOVA_03638 0.27 -0.6
455,768 + BACOVA_03638 0.33 -0.4
455,773 - BACOVA_03638 0.34 +0.1
455,789 + BACOVA_03638 0.35 +3.2
455,858 + BACOVA_03638 0.39 -0.9
455,859 - BACOVA_03638 0.39 -1.4
455,941 + BACOVA_03638 0.45 -0.5
455,942 - BACOVA_03638 0.45 +0.5

Or see this region's nucleotide sequence