Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03425

Experiment: a-Cyclodextrin 2.5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin 2.5 mg/ml (C)
140,027	+		BACOVA_03424	0.36	+0.2
140,030	-		BACOVA_03424	0.36	-0.5
140,030	-		BACOVA_03424	0.36	+0.0
140,030	-		BACOVA_03424	0.36	+0.2
140,031	+		BACOVA_03424	0.36	-0.3
140,035	+		BACOVA_03424	0.37	-1.6
140,036	-		BACOVA_03424	0.37	+0.1
140,057	-		BACOVA_03424	0.38	-0.4
140,057	-		BACOVA_03424	0.38	+0.4
140,103	-		BACOVA_03424	0.42	-0.1
140,153	-		BACOVA_03424	0.46	-1.1
140,153	-		BACOVA_03424	0.46	+2.7
140,154	+		BACOVA_03424	0.46	-0.2
140,155	-		BACOVA_03424	0.46	+0.0
140,190	+		BACOVA_03424	0.48	-0.5
140,220	+		BACOVA_03424	0.51	-0.2
140,235	+		BACOVA_03424	0.52	+0.8
140,260	+		BACOVA_03424	0.54	-2.2
140,261	-		BACOVA_03424	0.54	+0.5
140,261	-		BACOVA_03424	0.54	-0.8
140,261	-		BACOVA_03424	0.54	+0.5
140,261	-		BACOVA_03424	0.54	+1.4
140,263	-		BACOVA_03424	0.54	-0.6
140,308	-		BACOVA_03424	0.57	+0.1
140,316	+		BACOVA_03424	0.58	-0.2
140,317	-		BACOVA_03424	0.58	+0.2
140,329	+		BACOVA_03424	0.59	+0.5
140,330	-		BACOVA_03424	0.59	+1.2
140,380	-		BACOVA_03424	0.63	-0.5
140,380	-		BACOVA_03424	0.63	+1.1
140,416	+		BACOVA_03424	0.65	-0.4
140,416	+		BACOVA_03424	0.65	+1.5
140,417	-		BACOVA_03424	0.65	-1.4
140,417	-		BACOVA_03424	0.65	-0.6
140,419	-		BACOVA_03424	0.66	+0.7
140,419	-		BACOVA_03424	0.66	-0.2
140,419	-		BACOVA_03424	0.66	+2.2
140,450	-		BACOVA_03424	0.68	+1.7
140,553	+		BACOVA_03424	0.76	-3.2
140,554	-		BACOVA_03424	0.76	+4.6
140,569	+		BACOVA_03424	0.77	+1.8
140,569	+		BACOVA_03424	0.77	-0.5
140,570	-		BACOVA_03424	0.77	-0.2
140,589	+		BACOVA_03424	0.78	+1.8
140,596	+		BACOVA_03424	0.79	-0.6
140,720	+		BACOVA_03424	0.88	-1.6
140,721	-		BACOVA_03424	0.88	-0.5
140,733	+		BACOVA_03424	0.89	+1.1
140,734	-		BACOVA_03424	0.89	+0.3
140,734	-		BACOVA_03424	0.89	+1.2
140,734	-		BACOVA_03424	0.89	+0.7
140,759	+				-2.7
140,759	+				-0.2
140,760	-				-0.0
140,761	+				-0.2
140,762	-				-0.3
140,762	-				+0.4
140,764	-				-0.8
140,802	-				-0.5
140,802	-				-1.8
140,903	+				-0.8
140,904	-				+0.6
141,002	-				-2.3
141,007	-				+0.5
141,010	+				-0.3
141,011	-				-1.2
141,036	+				-1.5
141,102	+				-2.2
141,102	+				+2.0
141,110	+				+0.1
141,113	+				-0.8
141,113	+				-0.5
141,120	-				+0.4
141,147	+				+0.1
141,147	+				+0.4
141,148	-				+0.4
141,168	-				-1.2
141,174	+				-0.1
141,175	-				-0.7
141,233	-		BACOVA_03425	0.12	-0.5
141,241	+		BACOVA_03425	0.12	-0.6
141,292	+		BACOVA_03425	0.15	+1.3
141,298	+		BACOVA_03425	0.15	-3.1
141,323	-		BACOVA_03425	0.17	+0.5
141,334	-		BACOVA_03425	0.17	+0.9
141,361	+		BACOVA_03425	0.19	+1.0
141,362	-		BACOVA_03425	0.19	+0.5
141,372	-		BACOVA_03425	0.19	-1.2
141,378	+		BACOVA_03425	0.20	-1.4
141,379	-		BACOVA_03425	0.20	-1.1
141,379	-		BACOVA_03425	0.20	+2.5
141,379	-		BACOVA_03425	0.20	-0.6
141,388	+		BACOVA_03425	0.20	-2.6
141,405	+		BACOVA_03425	0.21	-1.1
141,405	+		BACOVA_03425	0.21	-1.9
141,406	-		BACOVA_03425	0.21	+1.0
141,474	-		BACOVA_03425	0.25	+0.0
141,529	+		BACOVA_03425	0.28	-0.3
141,538	+		BACOVA_03425	0.28	-0.7
141,540	+		BACOVA_03425	0.29	-0.1
141,550	+		BACOVA_03425	0.29	-1.8
141,551	-		BACOVA_03425	0.29	-0.3
141,551	-		BACOVA_03425	0.29	-0.2
141,553	+		BACOVA_03425	0.29	-1.1
141,553	+		BACOVA_03425	0.29	-0.9
141,554	-		BACOVA_03425	0.29	-0.1
141,555	+		BACOVA_03425	0.29	+0.2
141,555	+		BACOVA_03425	0.29	-1.8
141,556	-		BACOVA_03425	0.29	-2.1
141,561	-		BACOVA_03425	0.30	-2.1
141,654	+		BACOVA_03425	0.35	+2.3
141,695	-		BACOVA_03425	0.37	-1.8
141,696	+		BACOVA_03425	0.37	+1.0
141,697	-		BACOVA_03425	0.37	-0.1
141,697	-		BACOVA_03425	0.37	+0.5
141,727	-		BACOVA_03425	0.39	-0.2
141,739	-		BACOVA_03425	0.40	-0.5
141,739	-		BACOVA_03425	0.40	+1.8
141,751	-		BACOVA_03425	0.40	+0.1
141,751	-		BACOVA_03425	0.40	+1.7
141,756	-		BACOVA_03425	0.41	-0.6
141,762	-		BACOVA_03425	0.41	+0.5
141,815	+		BACOVA_03425	0.44	+0.0
141,854	+		BACOVA_03425	0.46	-0.4
141,870	-		BACOVA_03425	0.47	+2.4
141,872	-		BACOVA_03425	0.47	+0.1
141,878	+		BACOVA_03425	0.47	-1.0
141,879	-		BACOVA_03425	0.47	-0.8
141,890	-		BACOVA_03425	0.48	+0.2
141,966	+		BACOVA_03425	0.52	-0.5
141,967	-		BACOVA_03425	0.52	-0.4
142,116	+		BACOVA_03425	0.61	-1.9
142,116	+		BACOVA_03425	0.61	-1.4
142,116	+		BACOVA_03425	0.61	-1.2
142,117	-		BACOVA_03425	0.61	-0.4
142,152	+		BACOVA_03425	0.63	-1.1
142,153	-		BACOVA_03425	0.63	-1.5
142,153	-		BACOVA_03425	0.63	+0.6
142,211	+		BACOVA_03425	0.66	-0.2
142,218	+		BACOVA_03425	0.66	-0.3
142,218	+		BACOVA_03425	0.66	-0.1
142,260	+		BACOVA_03425	0.68	+1.5
142,265	-		BACOVA_03425	0.69	-1.3
142,281	-		BACOVA_03425	0.70	-1.2
142,284	-		BACOVA_03425	0.70	+0.3
142,304	+		BACOVA_03425	0.71	-1.1
142,311	+		BACOVA_03425	0.71	-2.6
142,311	+		BACOVA_03425	0.71	+1.5
142,328	+		BACOVA_03425	0.72	+2.0
142,328	+		BACOVA_03425	0.72	-2.3
142,329	-		BACOVA_03425	0.72	-1.1
142,329	-		BACOVA_03425	0.72	+0.5
142,329	-		BACOVA_03425	0.72	+0.8
142,399	-		BACOVA_03425	0.76	-1.2
142,477	-		BACOVA_03425	0.81	-0.3
142,547	-		BACOVA_03425	0.84	+0.2
142,647	+				+0.5
142,658	+				-1.3
142,661	-				+0.4
142,670	+				-2.1
142,671	-				+0.3
142,674	-				+0.1
142,740	+				+1.7
142,760	-				-0.5
142,809	-				-1.8
142,811	-				+2.5
142,841	+				-1.2
142,842	-				+1.6
142,850	+				-0.5
142,851	-				-0.3
142,853	+				-0.9
142,856	+				-0.4
142,856	+				-2.1
142,861	-				-0.4
142,861	-				-0.9
142,861	-				-0.8
142,874	-				+0.5
142,876	-				+0.0
142,930	-				+2.5
142,930	-				-0.1
142,930	-				-0.1
142,942	-				+1.6
142,947	-				-2.3
143,005	-				-0.3
143,005	-				+0.1
143,074	-				+2.4
143,108	+				-0.2
143,109	-				-0.5
143,130	+				+0.8
143,144	+				+2.5
143,144	+				-1.8
143,144	+				-0.8
143,145	-				+0.7
143,145	-				+0.1
143,200	+				+1.1
143,201	-				+0.1
143,201	-				-0.8
143,201	-				+1.2
143,249	+				-0.5
143,250	-				+0.2
143,272	-		BACOVA_03426	0.10	-1.0
143,295	-		BACOVA_03426	0.11	-0.5
143,333	+		BACOVA_03426	0.12	+3.0
143,333	+		BACOVA_03426	0.12	-3.4
143,334	-		BACOVA_03426	0.12	+0.6
143,385	-		BACOVA_03426	0.14	+0.6
143,389	-		BACOVA_03426	0.14	+0.2
143,389	-		BACOVA_03426	0.14	-0.6
143,431	-		BACOVA_03426	0.15	-0.2
143,484	+		BACOVA_03426	0.17	+0.6
143,485	-		BACOVA_03426	0.17	+0.4
143,485	-		BACOVA_03426	0.17	-0.6
143,502	+		BACOVA_03426	0.18	-0.1
143,503	-		BACOVA_03426	0.18	-0.5
143,505	+		BACOVA_03426	0.18	-1.6
143,520	-		BACOVA_03426	0.18	-0.2
143,555	+		BACOVA_03426	0.19	+0.8
143,556	-		BACOVA_03426	0.19	-0.2
143,560	-		BACOVA_03426	0.19	-0.7
143,577	+		BACOVA_03426	0.20	-0.2
143,577	+		BACOVA_03426	0.20	-0.0
143,639	+		BACOVA_03426	0.22	-0.1
143,639	+		BACOVA_03426	0.22	+0.4
143,647	-		BACOVA_03426	0.22	+0.4
143,648	+		BACOVA_03426	0.22	-0.5
143,649	-		BACOVA_03426	0.22	+1.9
143,649	-		BACOVA_03426	0.22	-1.3
143,653	-		BACOVA_03426	0.22	-0.5
143,679	+		BACOVA_03426	0.23	+1.5
143,680	-		BACOVA_03426	0.23	-1.1
143,703	-		BACOVA_03426	0.24	-0.5
143,726	+		BACOVA_03426	0.25	-0.6
143,737	+		BACOVA_03426	0.25	-0.8
143,746	+		BACOVA_03426	0.25	+0.8
143,747	-		BACOVA_03426	0.25	-0.3
143,747	-		BACOVA_03426	0.25	+0.2
143,747	-		BACOVA_03426	0.25	+0.5
143,769	+		BACOVA_03426	0.26	-0.1
143,770	-		BACOVA_03426	0.26	+3.0
143,819	-		BACOVA_03426	0.28	-1.3